RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 TRAM1Q15629 374 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 CDKN3Q16667 212 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 TMEM201Q5SNT2 666 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 LETMD1Q6P1Q0 360 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 LCTLQ6UWM7 567 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 GID4Q8IVV7 300 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.26□□□□□ -1.09
CTNND1-232ENST00000532649 PACRGLQ8N7B6 248 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 SLC37A3Q8NCC5 494 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 NLGN4YQ8NFZ3 816 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-232ENST00000532649 OR8K3Q8NH51 312 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 ZNF431Q8TF32 576 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-232ENST00000532649 BMFQ96LC9 184 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 SERINC2Q96SA4 455 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 PBX4Q9BYU1 374 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 STARD5Q9NSY2 213 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 NDUFAF4Q9P032 175 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 C5AR2Q9P296 337 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 SCN9AQ15858 1988 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 C17orf113A0A1B0GUU1 675 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 EFCAB7A8K855 629 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 POLR1CO15160 346 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-232ENST00000532649 HOXA9P31269 272 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 BCL2L15Q5TBC7 163 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 PLEKHG7Q6ZR37 379 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 TRIM46Q7Z4K8 759 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 SLC15A3Q8IY34 581 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 CLECL1Q8IZS7 167 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 STON2Q8WXE9 905 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 BARD1Q99728 777 aaKnown RBP8.26□□□□□ -1.09
CTNND1-232ENST00000532649 PBDC1Q9BVG4 233 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 MROQ9BYG7 248 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 NGBQ9NPG2 151 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 ZNF355PQ9NSJ1 428 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 CPNE7Q9UBL6 633 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 TBX21Q9UL17 535 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 CLEC4EQ9ULY5 219 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 D6RAR5 112 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 H6PDO95479 791 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 SLC2A1P11166 492 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 CCR7P32248 378 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 MFSD13AQ14CX5 517 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 LRIT3Q3SXY7 679 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 PARM1Q6UWI2 310 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 OR14K1Q8NGZ2 314 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 NEIL2Q969S2 332 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 TMEM203Q969S6 136 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 KCNK12Q9HB15 430 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 SERTAD4Q9NUC0 356 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 MGAT4BQ9UQ53 548 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 PAPPAQ13219 1627 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 CACNG3O60359 315 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 CD36P16671 472 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 TSTQ16762 297 aaKnown RBP8.26□□□□□ -1.09
CTNND1-232ENST00000532649 CTC1Q2NKJ3 1217 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 LHFPL3Q86UP9 236 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 TPRA1Q86W33 373 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 CCDC71LQ8N9Z2 235 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 PAPD5Q8NDF8 572 aaKnown RBP8.26□□□□□ -1.09
CTNND1-232ENST00000532649 OR7G3Q8NG95 312 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 OR51D1Q8NGF3 324 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 OR13J1Q8NGT2 312 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 DIO2Q92813 273 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 FAM46BQ96A09 425 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 ARRDC3Q96B67 414 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 DCBLD2Q96PD2 775 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 PITX2Q99697 317 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 ITPAQ9BY32 194 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 SDHAF2Q9NX18 166 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 CDK5RAP2Q96SN8 1893 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 SLC9B1P1A6NJY1 282 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 G3V2L1 256 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 CRYZL1O95825 349 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 EGFP01133 1207 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 ERP29P30040 261 aaKnown RBP8.26□□□□□ -1.09
CTNND1-232ENST00000532649 PRLHRP49683 370 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 MLLT10P55197 1068 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 GAS6Q14393 721 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 ZNF551Q7Z340 670 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-232ENST00000532649 ZUFSPQ96AP4 578 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 CHFRQ96EP1 664 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 SGCZQ96LD1 299 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 ZNF578Q96N58 590 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-232ENST00000532649 TIMM29Q9BSF4 260 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 DOHHQ9BU89 302 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 CRB3Q9BUF7 120 aa8.26□□□□□ -1.09
CTNND1-232ENST00000532649 ABCA3Q99758 1704 aa8.25□□□□□ -1.09
CTNND1-232ENST00000532649 THSD7AQ9UPZ6 1657 aa8.25□□□□□ -1.09
CTNND1-232ENST00000532649 LOC105369274A0A096LPK9 316 aa8.25□□□□□ -1.09
CTNND1-232ENST00000532649 UNC119BA6NIH7 251 aa8.25□□□□□ -1.09
CTNND1-232ENST00000532649 A6NL46 340 aa8.25□□□□□ -1.09
CTNND1-232ENST00000532649 PROM1O43490 865 aa8.25□□□□□ -1.09
CTNND1-232ENST00000532649 ATXN1LP0C7T5 689 aaKnown RBP8.25□□□□□ -1.09
CTNND1-232ENST00000532649 GPR143P51810 404 aa8.25□□□□□ -1.09
CTNND1-232ENST00000532649 STK11Q15831 433 aa8.25□□□□□ -1.09
CTNND1-232ENST00000532649 DUSP6Q16828 381 aa8.25□□□□□ -1.09
CTNND1-232ENST00000532649 RNF220Q5VTB9 566 aa8.25□□□□□ -1.09
CTNND1-232ENST00000532649 BLOC1S3Q6QNY0 202 aa8.25□□□□□ -1.09
CTNND1-232ENST00000532649 OR4N4Q8N0Y3 316 aa8.25□□□□□ -1.09
CTNND1-232ENST00000532649 DEFB123Q8N688 67 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms