RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 SFXN2Q96NB2 322 aa15.65■□□□□ 0.1
PHRF1-204ENST00000532550 ZIM3Q96PE6 472 aa15.65■□□□□ 0.1
PHRF1-204ENST00000532550 C1orf50Q9BV19 199 aa15.65■□□□□ 0.1
PHRF1-204ENST00000532550 PTGES2Q9H7Z7 377 aa15.65■□□□□ 0.1
PHRF1-204ENST00000532550 ATAD3AQ9NVI7 634 aa15.65■□□□□ 0.1
PHRF1-204ENST00000532550 NTMQ9P121 344 aa15.65■□□□□ 0.1
PHRF1-204ENST00000532550 ZNF629Q9UEG4 869 aaPredicted RBP15.65■□□□□ 0.1
PHRF1-204ENST00000532550 A0A1W2PRB8 838 aa15.64■□□□□ 0.09
PHRF1-204ENST00000532550 H0Y3Z8 333 aa15.64■□□□□ 0.09
PHRF1-204ENST00000532550 ITM2AO43736 263 aa15.64■□□□□ 0.09
PHRF1-204ENST00000532550 ZIC3O60481 467 aa15.64■□□□□ 0.09
PHRF1-204ENST00000532550 NKX2-2O95096 273 aa15.64■□□□□ 0.09
PHRF1-204ENST00000532550 ZWINTO95229 277 aa15.64■□□□□ 0.09
PHRF1-204ENST00000532550 UTS2O95399 124 aa15.64■□□□□ 0.09
PHRF1-204ENST00000532550 LAMP1P11279 417 aa15.64■□□□□ 0.09
PHRF1-204ENST00000532550 EFNA1P20827 205 aaPredicted RBP15.64■□□□□ 0.09
PHRF1-204ENST00000532550 TCEA1P23193 301 aaKnown RBP15.64■□□□□ 0.09
PHRF1-204ENST00000532550 CHMP24386 653 aa15.64■□□□□ 0.09
PHRF1-204ENST00000532550 GFRA1P56159 465 aa15.64■□□□□ 0.09
PHRF1-204ENST00000532550 ABCE1P61221 599 aaKnown RBP15.64■□□□□ 0.09
PHRF1-204ENST00000532550 STX5Q13190 355 aa15.64■□□□□ 0.09
PHRF1-204ENST00000532550 PTGR1Q14914 329 aa15.64■□□□□ 0.09
PHRF1-204ENST00000532550 ZCCHC12Q6PEW1 402 aa15.64■□□□□ 0.09
PHRF1-204ENST00000532550 DCHS2Q6V1P9 2916 aa15.64■□□□□ 0.09
PHRF1-204ENST00000532550 MARCH3Q86UD3 253 aa15.64■□□□□ 0.09
PHRF1-204ENST00000532550 NAXEQ8NCW5 288 aa15.64■□□□□ 0.09
PHRF1-204ENST00000532550 ZBTB9Q96C00 473 aa15.64■□□□□ 0.09
PHRF1-204ENST00000532550 RMND5BQ96G75 393 aaPredicted RBP15.64■□□□□ 0.09
PHRF1-204ENST00000532550 MS4A4EQ96PG1 132 aa15.64■□□□□ 0.09
PHRF1-204ENST00000532550 TBL1XR1Q9BZK7 514 aa15.64■□□□□ 0.09
PHRF1-204ENST00000532550 PCNX3Q9H6A9 2034 aa15.64■□□□□ 0.09
PHRF1-204ENST00000532550 MCCC2Q9HCC0 563 aa15.64■□□□□ 0.09
PHRF1-204ENST00000532550 FLRT3Q9NZU0 649 aa15.64■□□□□ 0.09
PHRF1-204ENST00000532550 MED11Q9P086 117 aa15.64■□□□□ 0.09
PHRF1-204ENST00000532550 RPH3AQ9Y2J0 694 aaPredicted RBP15.64■□□□□ 0.09
PHRF1-204ENST00000532550 ACTL7BQ9Y614 415 aa15.64■□□□□ 0.09
PHRF1-204ENST00000532550 CSMD1Q96PZ7 3565 aa15.64■□□□□ 0.09
PHRF1-204ENST00000532550 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.63■□□□□ 0.09
PHRF1-204ENST00000532550 MBD3L4A6NDZ8 208 aaPredicted RBP15.63■□□□□ 0.09
PHRF1-204ENST00000532550 MBD3L3A6NE82 208 aaPredicted RBP15.63■□□□□ 0.09
PHRF1-204ENST00000532550 MBD3L5A6NJ08 208 aaPredicted RBP15.63■□□□□ 0.09
PHRF1-204ENST00000532550 SYT5O00445 386 aa15.63■□□□□ 0.09
PHRF1-204ENST00000532550 SNUPNO95149 360 aaKnown RBP15.63■□□□□ 0.09
PHRF1-204ENST00000532550 ALOX5P09917 674 aa15.63■□□□□ 0.09
PHRF1-204ENST00000532550 HK1P19367 917 aa15.63■□□□□ 0.09
PHRF1-204ENST00000532550 CAPN3P20807 821 aa15.63■□□□□ 0.09
PHRF1-204ENST00000532550 PRPS1L1P21108 318 aa15.63■□□□□ 0.09
PHRF1-204ENST00000532550 MAP3K8P41279 467 aa15.63■□□□□ 0.09
PHRF1-204ENST00000532550 PRIM2P49643 509 aa15.63■□□□□ 0.09
PHRF1-204ENST00000532550 EMX2Q04743 252 aa15.63■□□□□ 0.09
PHRF1-204ENST00000532550 C17orf67Q0P5P2 114 aa15.63■□□□□ 0.09
PHRF1-204ENST00000532550 LSM12Q3MHD2 195 aaKnown RBP15.63■□□□□ 0.09
PHRF1-204ENST00000532550 CES4AQ5XG92 561 aa15.63■□□□□ 0.09
PHRF1-204ENST00000532550 FADS6Q8N9I5 356 aa15.63■□□□□ 0.09
PHRF1-204ENST00000532550 OR2M3Q8NG83 312 aa15.63■□□□□ 0.09
PHRF1-204ENST00000532550 MBD3L2Q8NHZ7 208 aaPredicted RBP15.63■□□□□ 0.09
PHRF1-204ENST00000532550 HOXB13Q92826 284 aaPredicted RBP15.63■□□□□ 0.09
PHRF1-204ENST00000532550 GIMAP5Q96F15 307 aa15.63■□□□□ 0.09
PHRF1-204ENST00000532550 CHMP6Q96FZ7 201 aa15.63■□□□□ 0.09
PHRF1-204ENST00000532550 PGM2Q96G03 612 aa15.63■□□□□ 0.09
PHRF1-204ENST00000532550 C16orf58Q96GQ5 468 aa15.63■□□□□ 0.09
PHRF1-204ENST00000532550 PAIP2Q9BPZ3 127 aaKnown RBP15.63■□□□□ 0.09
PHRF1-204ENST00000532550 TUBA1CQ9BQE3 449 aa15.63■□□□□ 0.09
PHRF1-204ENST00000532550 ZNF559Q9BR84 538 aa15.63■□□□□ 0.09
PHRF1-204ENST00000532550 ZNF395Q9H8N7 513 aaPredicted RBP15.63■□□□□ 0.09
PHRF1-204ENST00000532550 KCNN3Q9UGI6 736 aa15.63■□□□□ 0.09
PHRF1-204ENST00000532550 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.63■□□□□ 0.09
PHRF1-204ENST00000532550 RAP2CQ9Y3L5 183 aa15.63■□□□□ 0.09
PHRF1-204ENST00000532550 SNX8Q9Y5X2 465 aa15.63■□□□□ 0.09
PHRF1-204ENST00000532550 DOCK7Q96N67 2140 aa15.62■□□□□ 0.09
PHRF1-204ENST00000532550 C17orf51A8MQB3 221 aa15.62■□□□□ 0.09
PHRF1-204ENST00000532550 IGKV1D-16P01601 117 aa15.62■□□□□ 0.09
PHRF1-204ENST00000532550 DHRS4L1P0CG22 281 aa15.62■□□□□ 0.09
PHRF1-204ENST00000532550 ACP2P11117 423 aa15.62■□□□□ 0.09
PHRF1-204ENST00000532550 PEPDP12955 493 aa15.62■□□□□ 0.09
PHRF1-204ENST00000532550 CTSSP25774 331 aa15.62■□□□□ 0.09
PHRF1-204ENST00000532550 UQCRC1P31930 480 aa15.62■□□□□ 0.09
PHRF1-204ENST00000532550 OPRM1P35372 400 aa15.62■□□□□ 0.09
PHRF1-204ENST00000532550 SLC1A6P48664 564 aa15.62■□□□□ 0.09
PHRF1-204ENST00000532550 LHX2P50458 406 aa15.62■□□□□ 0.09
PHRF1-204ENST00000532550 RPL14P50914 215 aaKnown RBP15.62■□□□□ 0.09
PHRF1-204ENST00000532550 ZNF136P52737 540 aa15.62■□□□□ 0.09
PHRF1-204ENST00000532550 DGKQP52824 942 aa15.62■□□□□ 0.09
PHRF1-204ENST00000532550 MYBPHQ13203 477 aa15.62■□□□□ 0.09
PHRF1-204ENST00000532550 GANABQ14697 944 aaKnown RBP15.62■□□□□ 0.09
PHRF1-204ENST00000532550 SMU1Q2TAY7 513 aa15.62■□□□□ 0.09
PHRF1-204ENST00000532550 GRAMD1BQ3KR37 738 aa15.62■□□□□ 0.09
PHRF1-204ENST00000532550 TNFAIP8L3Q5GJ75 292 aa15.62■□□□□ 0.09
PHRF1-204ENST00000532550 MFSD12Q6NUT3 480 aa15.62■□□□□ 0.09
PHRF1-204ENST00000532550 ARSKQ6UWY0 536 aa15.62■□□□□ 0.09
PHRF1-204ENST00000532550 CHMP1BQ7LBR1 199 aa15.62■□□□□ 0.09
PHRF1-204ENST00000532550 KRTCAP2Q8N6L1 136 aa15.62■□□□□ 0.09
PHRF1-204ENST00000532550 ZNF781Q8N8C0 355 aa15.62■□□□□ 0.09
PHRF1-204ENST00000532550 SLC16A11Q8NCK7 471 aa15.62■□□□□ 0.09
PHRF1-204ENST00000532550 FBXO30Q8TB52 745 aa15.62■□□□□ 0.09
PHRF1-204ENST00000532550 OR5P2Q8WZ92 322 aa15.62■□□□□ 0.09
PHRF1-204ENST00000532550 COQ8BQ96D53 544 aa15.62■□□□□ 0.09
PHRF1-204ENST00000532550 FAM120BQ96EK7 910 aaKnown RBP15.62■□□□□ 0.09
PHRF1-204ENST00000532550 PPP1R36Q96LQ0 422 aa15.62■□□□□ 0.09
PHRF1-204ENST00000532550 TM9SF2Q99805 663 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms