RNA–Protein interactions for RNA: ENST00000531744.5

SDHD-212, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 2

Gene SDHD, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-212ENST00000531744 CSPG4Q6UVK1 2322 aa11.29□□□□□ -0.6
SDHD-212ENST00000531744 IGLV3-32A0A0A0MS00 114 aa11.29□□□□□ -0.6
SDHD-212ENST00000531744 OR2M5A3KFT3 312 aa11.29□□□□□ -0.6
SDHD-212ENST00000531744 TMEM233B4DJY2 109 aa11.29□□□□□ -0.6
SDHD-212ENST00000531744 CGAP01215 116 aa11.29□□□□□ -0.6
SDHD-212ENST00000531744 ACP2P11117 423 aa11.29□□□□□ -0.6
SDHD-212ENST00000531744 CD99P14209 185 aa11.29□□□□□ -0.6
SDHD-212ENST00000531744 SDC1P18827 310 aa11.29□□□□□ -0.6
SDHD-212ENST00000531744 LOXP28300 417 aaPredicted RBP11.29□□□□□ -0.6
SDHD-212ENST00000531744 PEX19P40855 299 aa11.29□□□□□ -0.6
SDHD-212ENST00000531744 GSTM5P46439 218 aa11.29□□□□□ -0.6
SDHD-212ENST00000531744 DSCR4P56555 118 aaPredicted RBP11.29□□□□□ -0.6
SDHD-212ENST00000531744 STX5Q13190 355 aa11.29□□□□□ -0.6
SDHD-212ENST00000531744 SF3B4Q15427 424 aaKnown RBP eCLIP11.29□□□□□ -0.6
SDHD-212ENST00000531744 BCL2A1Q16548 175 aa11.29□□□□□ -0.6
SDHD-212ENST00000531744 GRAMD1BQ3KR37 738 aa11.29□□□□□ -0.6
SDHD-212ENST00000531744 UGT3A2Q3SY77 523 aa11.29□□□□□ -0.6
SDHD-212ENST00000531744 CYP27C1Q4G0S4 372 aa11.29□□□□□ -0.6
SDHD-212ENST00000531744 RFTN2Q52LD8 501 aaPredicted RBP11.29□□□□□ -0.6
SDHD-212ENST00000531744 GALNT10Q86SR1 603 aa11.29□□□□□ -0.6
SDHD-212ENST00000531744 GGNQ86UU5 652 aa11.29□□□□□ -0.6
SDHD-212ENST00000531744 C4orf33Q8N1A6 199 aa11.29□□□□□ -0.6
SDHD-212ENST00000531744 FAM76AQ8TAV0 307 aa11.29□□□□□ -0.6
SDHD-212ENST00000531744 DUSP19Q8WTR2 217 aa11.29□□□□□ -0.6
SDHD-212ENST00000531744 ZNF845Q96IR2 970 aaPredicted RBP11.29□□□□□ -0.6
SDHD-212ENST00000531744 MARK4Q96L34 752 aa11.29□□□□□ -0.6
SDHD-212ENST00000531744 ZFP3Q96NJ6 502 aa11.29□□□□□ -0.6
SDHD-212ENST00000531744 TM9SF2Q99805 663 aa11.29□□□□□ -0.6
SDHD-212ENST00000531744 GIMAP4Q9NUV9 329 aa11.29□□□□□ -0.6
SDHD-212ENST00000531744 PPP4R1LQ9P1A2 415 aa11.29□□□□□ -0.6
SDHD-212ENST00000531744 GIMAP2Q9UG22 337 aa11.29□□□□□ -0.6
SDHD-212ENST00000531744 BAIAP2L1Q9UHR4 511 aa11.29□□□□□ -0.6
SDHD-212ENST00000531744 DKKL1Q9UK85 242 aa11.29□□□□□ -0.6
SDHD-212ENST00000531744 OR10H1Q9Y4A9 318 aa11.29□□□□□ -0.6
SDHD-212ENST00000531744 TESMINQ9Y4I5 508 aa11.29□□□□□ -0.6
SDHD-212ENST00000531744 CUBNO60494 3623 aa11.29□□□□□ -0.6
SDHD-212ENST00000531744 SH3D21A4FU49 640 aa11.28□□□□□ -0.6
SDHD-212ENST00000531744 SMIM23A6NLE4 172 aa11.28□□□□□ -0.6
SDHD-212ENST00000531744 DEFB108AA8MXU0 73 aa11.28□□□□□ -0.6
SDHD-212ENST00000531744 COQ9O75208 318 aa11.28□□□□□ -0.6
SDHD-212ENST00000531744 NKX2-2O95096 273 aa11.28□□□□□ -0.6
SDHD-212ENST00000531744 UTS2O95399 124 aa11.28□□□□□ -0.6
SDHD-212ENST00000531744 CHRNGP07510 517 aa11.28□□□□□ -0.6
SDHD-212ENST00000531744 UROSP10746 265 aa11.28□□□□□ -0.6
SDHD-212ENST00000531744 CPA3P15088 417 aa11.28□□□□□ -0.6
SDHD-212ENST00000531744 HK1P19367 917 aa11.28□□□□□ -0.6
SDHD-212ENST00000531744 CD53P19397 219 aa11.28□□□□□ -0.6
SDHD-212ENST00000531744 EFNA1P20827 205 aaPredicted RBP11.28□□□□□ -0.6
SDHD-212ENST00000531744 SLC6A8P48029 635 aa11.28□□□□□ -0.6
SDHD-212ENST00000531744 PDE7AQ13946 482 aa11.28□□□□□ -0.6
SDHD-212ENST00000531744 KANK2Q63ZY3 851 aa11.28□□□□□ -0.6
SDHD-212ENST00000531744 AAGABQ6PD74 315 aa11.28□□□□□ -0.6
SDHD-212ENST00000531744 CXorf67Q86X51 503 aaPredicted RBP11.28□□□□□ -0.6
SDHD-212ENST00000531744 KIF18BQ86Y91 864 aa11.28□□□□□ -0.6
SDHD-212ENST00000531744 GRAMD2AQ8IUY3 354 aa11.28□□□□□ -0.6
SDHD-212ENST00000531744 UBQLNLQ8IYU4 475 aa11.28□□□□□ -0.6
SDHD-212ENST00000531744 WFDC11Q8NEX6 87 aa11.28□□□□□ -0.6
SDHD-212ENST00000531744 OR4K17Q8NGC6 315 aa11.28□□□□□ -0.6
SDHD-212ENST00000531744 OR2W6PQ8NHA6 318 aa11.28□□□□□ -0.6
SDHD-212ENST00000531744 CLHC1Q8NHS4 586 aa11.28□□□□□ -0.6
SDHD-212ENST00000531744 FAM110BQ8TC76 370 aa11.28□□□□□ -0.6
SDHD-212ENST00000531744 ZNF524Q96C55 264 aa11.28□□□□□ -0.6
SDHD-212ENST00000531744 CCDC126Q96EE4 140 aa11.28□□□□□ -0.6
SDHD-212ENST00000531744 C1GALT1C1Q96EU7 318 aa11.28□□□□□ -0.6
SDHD-212ENST00000531744 OTUB1Q96FW1 271 aaPredicted RBP11.28□□□□□ -0.6
SDHD-212ENST00000531744 DACH2Q96NX9 599 aa11.28□□□□□ -0.6
SDHD-212ENST00000531744 ALPK1Q96QP1 1244 aa11.28□□□□□ -0.6
SDHD-212ENST00000531744 OPN3Q9H1Y3 402 aaPredicted RBP11.28□□□□□ -0.6
SDHD-212ENST00000531744 MIEF1Q9NQG6 463 aa11.28□□□□□ -0.6
SDHD-212ENST00000531744 SIRT3Q9NTG7 399 aaPredicted RBP11.28□□□□□ -0.6
SDHD-212ENST00000531744 FAM120CQ9NX05 1096 aaKnown RBP11.28□□□□□ -0.6
SDHD-212ENST00000531744 NTMQ9P121 344 aa11.28□□□□□ -0.6
SDHD-212ENST00000531744 ABCG2Q9UNQ0 655 aa11.28□□□□□ -0.6
SDHD-212ENST00000531744 DNAJC15Q9Y5T4 150 aa11.28□□□□□ -0.6
SDHD-212ENST00000531744 PLCE1Q9P212 2302 aa11.27□□□□□ -0.6
SDHD-212ENST00000531744 CR1P17927 2039 aa11.27□□□□□ -0.61
SDHD-212ENST00000531744 KIF2AO00139 706 aaPredicted RBP11.27□□□□□ -0.61
SDHD-212ENST00000531744 LSM1O15116 133 aaKnown RBP11.27□□□□□ -0.61
SDHD-212ENST00000531744 AKAP10O43572 662 aa11.27□□□□□ -0.61
SDHD-212ENST00000531744 GMFGO60234 142 aa11.27□□□□□ -0.61
SDHD-212ENST00000531744 TBX19O60806 448 aa11.27□□□□□ -0.61
SDHD-212ENST00000531744 SEC22BO75396 215 aa11.27□□□□□ -0.61
SDHD-212ENST00000531744 AQP8O94778 261 aa11.27□□□□□ -0.61
SDHD-212ENST00000531744 IFI6P09912 130 aa11.27□□□□□ -0.61
SDHD-212ENST00000531744 KRT4P19013 534 aa11.27□□□□□ -0.61
SDHD-212ENST00000531744 DNASE1P24855 282 aa11.27□□□□□ -0.61
SDHD-212ENST00000531744 PSMA4P25789 261 aaKnown RBP11.27□□□□□ -0.61
SDHD-212ENST00000531744 HOXC12P31275 282 aa11.27□□□□□ -0.61
SDHD-212ENST00000531744 GABRA3P34903 492 aa11.27□□□□□ -0.61
SDHD-212ENST00000531744 PSPHP78330 225 aa11.27□□□□□ -0.61
SDHD-212ENST00000531744 MRPS22P82650 360 aaKnown RBP11.27□□□□□ -0.61
SDHD-212ENST00000531744 PRR5P85299 388 aa11.27□□□□□ -0.61
SDHD-212ENST00000531744 HSPB3Q12988 150 aa11.27□□□□□ -0.61
SDHD-212ENST00000531744 IMPG1Q17R60 797 aa11.27□□□□□ -0.61
SDHD-212ENST00000531744 CTU2Q2VPK5 515 aaKnown RBP11.27□□□□□ -0.61
SDHD-212ENST00000531744 DEFB113Q30KQ7 82 aa11.27□□□□□ -0.61
SDHD-212ENST00000531744 CCDC153Q494R4 210 aa11.27□□□□□ -0.61
SDHD-212ENST00000531744 LIPMQ5VYY2 423 aa11.27□□□□□ -0.61
SDHD-212ENST00000531744 RNF165Q6ZSG1 346 aa11.27□□□□□ -0.61
SDHD-212ENST00000531744 IKBIPQ70UQ0 350 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms