RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 FAM149AA5PLN7 773 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 ARHGAP42A6NI28 874 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 OR6C70A6NIJ9 312 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 SNTNA6NMZ2 147 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 KBTBD13C9JR72 458 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 KMOO15229 486 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 AKR7A2O43488 359 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 SPRY1O43609 319 aaPredicted RBP2.96□□□□□ -1.94
PTPRK-220ENST00000531466 TBX19O60806 448 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 ECI2O75521 394 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 SCGB2A1O75556 95 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 PDE5AO76074 875 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 TGM6O95932 706 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 ASS1P00966 412 aaKnown RBP2.96□□□□□ -1.94
PTPRK-220ENST00000531466 TGFAP01135 160 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 CALCAP01258 141 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 TRBC1P01850 177 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 HOXC4P09017 264 aaPredicted RBP2.96□□□□□ -1.94
PTPRK-220ENST00000531466 GSTA2P09210 222 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 UROSP10746 265 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 AREGP15514 252 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 HOXB8P17481 243 aaPredicted RBP2.96□□□□□ -1.94
PTPRK-220ENST00000531466 M6PRP20645 277 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 ACHEP22303 614 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 EEF1B2P24534 225 aaKnown RBP2.96□□□□□ -1.94
PTPRK-220ENST00000531466 ELK3P41970 407 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 SLC11A1P49279 550 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 CEBPDP49716 269 aaPredicted RBP2.96□□□□□ -1.94
PTPRK-220ENST00000531466 GSK3BP49841 420 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 RAP1GDS1P52306 607 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 CEBPGP53567 150 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 DCDC1P59894 354 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 LIPEQ05469 1076 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 RBPJQ06330 500 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 SMARCB1Q12824 385 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 PDZK1IP1Q13113 114 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 MAB21L1Q13394 359 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 ZNF273Q14593 569 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 PON2Q15165 354 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 SSX2Q16385 188 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 ZNF311Q5JNZ3 666 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 PIP5KL1Q5T9C9 394 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 TTC33Q6PID6 262 aaPredicted RBP2.96□□□□□ -1.94
PTPRK-220ENST00000531466 UTS2BQ765I0 119 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 BZW1Q7L1Q6 419 aaKnown RBP2.96□□□□□ -1.94
PTPRK-220ENST00000531466 KCTD9Q7L273 389 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 DCXRQ7Z4W1 244 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 SPATA19Q7Z5L4 167 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 CENPVQ7Z7K6 275 aaPredicted RBP2.96□□□□□ -1.94
PTPRK-220ENST00000531466 ADGRD2Q7Z7M1 963 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 ZNF677Q86XU0 584 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 ZNF573Q86YE8 665 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 ZNF595Q8IYB9 648 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.96□□□□□ -1.94
PTPRK-220ENST00000531466 NHLRC2Q8NBF2 726 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 UXS1Q8NBZ7 420 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 CAMKVQ8NCB2 501 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 BPIFCQ8NFQ6 507 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 OR4D10Q8NGI6 311 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 LRRC20Q8TCA0 184 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 LKAAEAR1Q8TD35 194 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 ROBO4Q8WZ75 1007 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 RAD51AP1Q96B01 352 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 SEPHS2Q99611 448 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 CIB1Q99828 191 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 C19orf43Q9BQ61 176 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 CHID1Q9BWS9 393 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 NDEL1Q9GZM8 345 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 TMEM117Q9H0C3 514 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 OR52A5Q9H2C5 316 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 BLZF1Q9H2G9 400 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 DHX33Q9H6R0 707 aaKnown RBP2.96□□□□□ -1.94
PTPRK-220ENST00000531466 ECT2Q9H8V3 914 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 TRIM45Q9H8W5 580 aaPredicted RBP2.96□□□□□ -1.94
PTPRK-220ENST00000531466 CNOT10Q9H9A5 744 aaKnown RBP2.96□□□□□ -1.94
PTPRK-220ENST00000531466 HYPKQ9NX55 129 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 DPP3Q9NY33 737 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 CNIH4Q9P003 139 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 TRIM10Q9UDY6 481 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 FBXW2Q9UKT8 454 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 PACSIN2Q9UNF0 486 aaPredicted RBP2.96□□□□□ -1.94
PTPRK-220ENST00000531466 SLC22A14Q9Y267 594 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 SH3GLB1Q9Y371 365 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 LIPGQ9Y5X9 500 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 PARD3Q8TEW0 1356 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 A0A0U1RQV5 110 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 C2orf92A0A1B0GVN3 265 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 A0A1W2PPM1 405 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 HTR3EA5X5Y0 456 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 BTBD17A6NE02 478 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 CFAP73A6NFT4 308 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 TUBAL3A6NHL2 446 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 RPL37AP8A6NKH3 93 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 ANXA2P2A6NMY6 339 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 SYCE1LA8MT33 242 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 F8WDY8 70 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 ZNF701M0R085 212 aaPredicted RBP2.95□□□□□ -1.94
PTPRK-220ENST00000531466 PTGESO14684 152 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 B4GALT2O60909 372 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 OR6B1O95007 311 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms