RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 FOLH1BQ9HBA9 442 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 TPSG1Q9NRR2 321 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 FBXO34Q9NWN3 711 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 NPAP1Q9NZP6 1156 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 PPP4R1LQ9P1A2 415 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 ASIC3Q9UHC3 531 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 CFL2Q9Y281 166 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 ZNF337Q9Y3M9 751 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 A0A0A6YYD5 115 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 GOLGA8QA0A0J9YX86 632 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 A0A1W2PR48 441 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 GOLGA8OA6NCC3 632 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 OR6C70A6NIJ9 312 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 E7EQL1 145 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 GOLGA8NF8WBI6 632 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 GOLGA8RI6L899 631 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 TO15178 435 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 SMAD9O15198 467 aaKnown RBP7.27□□□□□ -1.25
CD44-232ENST00000531118 FBXO24O75426 580 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 EEDO75530 441 aaKnown RBP7.27□□□□□ -1.25
CD44-232ENST00000531118 MLNP12872 115 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 ZNF23P17027 643 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 EPORP19235 508 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 S1PR1P21453 382 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 NT5EP21589 574 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 SERPINB1P30740 379 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 CASP2P42575 452 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 VPS41P49754 854 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 CHIT1Q13231 466 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 LAPTM5Q13571 262 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 CRYMQ14894 314 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 EXOSC7Q15024 291 aaKnown RBP7.27□□□□□ -1.25
CD44-232ENST00000531118 SGCBQ16585 318 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 PDK4Q16654 411 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 HIST2H2ACQ16777 129 aaPredicted RBP7.27□□□□□ -1.25
CD44-232ENST00000531118 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.27□□□□□ -1.25
CD44-232ENST00000531118 SFRP5Q5T4F7 317 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 HIST2H2AA3Q6FI13 130 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 DEF8Q6ZN54 512 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 GSTA5Q7RTV2 222 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 GALNT10Q86SR1 603 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 CCDC25Q86WR0 208 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 CNTN4Q8IWV2 1026 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 CCDC170Q8IYT3 715 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 FBXL14Q8N1E6 418 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 RNF175Q8N4F7 328 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 KISS1RQ969F8 398 aaPredicted RBP7.27□□□□□ -1.25
CD44-232ENST00000531118 TMBIM1Q969X1 311 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 CMTM7Q96FZ5 175 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 HES6Q96HZ4 224 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 FAM46AQ96IP4 442 aaKnown RBP7.27□□□□□ -1.25
CD44-232ENST00000531118 BTBD9Q96Q07 612 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 RBM4Q9BWF3 364 aaKnown RBP7.27□□□□□ -1.25
CD44-232ENST00000531118 DSN1Q9H410 356 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 METTL17Q9H7H0 456 aaPredicted RBP7.27□□□□□ -1.25
CD44-232ENST00000531118 XAB2Q9HCS7 855 aaKnown RBP7.27□□□□□ -1.25
CD44-232ENST00000531118 SMYD2Q9NRG4 433 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 GLRX2Q9NS18 164 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 TMEFF2Q9UIK5 374 aaPredicted RBP7.27□□□□□ -1.25
CD44-232ENST00000531118 MCTS1Q9ULC4 181 aaKnown RBP7.27□□□□□ -1.25
CD44-232ENST00000531118 CORO1CQ9ULV4 474 aaPredicted RBP7.27□□□□□ -1.25
CD44-232ENST00000531118 HIF3AQ9Y2N7 669 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 PLLPQ9Y342 182 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 REXO2Q9Y3B8 237 aaKnown RBP7.27□□□□□ -1.25
CD44-232ENST00000531118 ASB4Q9Y574 426 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 PCDHGB1Q9Y5G3 927 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 FKBP7Q9Y680 259 aa7.27□□□□□ -1.25
CD44-232ENST00000531118 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.27□□□□□ -1.25
CD44-232ENST00000531118 MAGEB16A2A368 324 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 GOLGA8MH3BSY2 632 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 TRIM77I1YAP6 450 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 TAPBPO15533 448 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 SCO2O43819 266 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 CBX7O95931 251 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 AHSGP02765 367 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 H2AFB1P0C5Y9 115 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 H2AFB2P0C5Z0 115 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 CPMP14384 443 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 PIK3R1P27986 724 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 MAGEA3P43357 314 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 HSPA7P48741 367 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 HILS1P60008 231 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 IRF8Q02556 426 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 LGALS3BPQ08380 585 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 DDX39BQ13838 428 aaKnown RBP7.26□□□□□ -1.25
CD44-232ENST00000531118 EFR3AQ14156 821 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 E2F2Q14209 437 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 ZNF460Q14592 562 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 PPA1Q15181 289 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 TRIP13Q15645 432 aaPredicted RBP7.26□□□□□ -1.25
CD44-232ENST00000531118 TBCCQ15814 346 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 STK11Q15831 433 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 DRICH1Q6PGQ1 229 aaPredicted RBP7.26□□□□□ -1.25
CD44-232ENST00000531118 BHLHA15Q7RTS1 189 aaPredicted RBP7.26□□□□□ -1.25
CD44-232ENST00000531118 GALNT7Q86SF2 657 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 TDRPQ86YL5 185 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 LAS2Q8IYD9 372 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 SYCE1Q8N0S2 351 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 OR10D3Q8NH80 312 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 ZNF418Q8TF45 676 aaPredicted RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms