RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 CEACAM20Q6UY09 585 aa6.88□□□□□ -1.31
CTNND1-229ENST00000531014 MEX3BQ6ZN04 569 aaKnown RBP6.88□□□□□ -1.31
CTNND1-229ENST00000531014 TRAPPC6BQ86SZ2 158 aa6.88□□□□□ -1.31
CTNND1-229ENST00000531014 OR13J1Q8NGT2 312 aa6.88□□□□□ -1.31
CTNND1-229ENST00000531014 INTS12Q96CB8 462 aaKnown RBP6.88□□□□□ -1.31
CTNND1-229ENST00000531014 TPPP3Q9BW30 176 aa6.88□□□□□ -1.31
CTNND1-229ENST00000531014 MMP28Q9H239 520 aa6.88□□□□□ -1.31
CTNND1-229ENST00000531014 SRMSQ9H3Y6 488 aa6.88□□□□□ -1.31
CTNND1-229ENST00000531014 PTGES2Q9H7Z7 377 aa6.88□□□□□ -1.31
CTNND1-229ENST00000531014 KLHL42Q9P2K6 505 aa6.88□□□□□ -1.31
CTNND1-229ENST00000531014 ANKMY1Q9P2S6 941 aa6.88□□□□□ -1.31
CTNND1-229ENST00000531014 COQ4Q9Y3A0 265 aa6.88□□□□□ -1.31
CTNND1-229ENST00000531014 RAI2Q9Y5P3 530 aa6.88□□□□□ -1.31
CTNND1-229ENST00000531014 hCG_1807616A0A1W2PRN6 198 aa6.88□□□□□ -1.31
CTNND1-229ENST00000531014 POM121CA8CG34 1229 aa6.88□□□□□ -1.31
CTNND1-229ENST00000531014 CEBPZOSA8MTT3 80 aa6.88□□□□□ -1.31
CTNND1-229ENST00000531014 MSTNO14793 375 aa6.88□□□□□ -1.31
CTNND1-229ENST00000531014 CLDN11O75508 207 aa6.88□□□□□ -1.31
CTNND1-229ENST00000531014 KCNK5O95279 499 aa6.88□□□□□ -1.31
CTNND1-229ENST00000531014 MAS1P04201 325 aa6.88□□□□□ -1.31
CTNND1-229ENST00000531014 CTRB1P17538 263 aa6.88□□□□□ -1.31
CTNND1-229ENST00000531014 SSTR2P30874 369 aa6.88□□□□□ -1.31
CTNND1-229ENST00000531014 ACVR1BP36896 505 aa6.88□□□□□ -1.31
CTNND1-229ENST00000531014 SULT1A2P50226 295 aa6.88□□□□□ -1.31
CTNND1-229ENST00000531014 IL13RA1P78552 427 aa6.88□□□□□ -1.31
CTNND1-229ENST00000531014 SCAPQ12770 1279 aa6.88□□□□□ -1.31
CTNND1-229ENST00000531014 KCNAB2Q13303 367 aa6.88□□□□□ -1.31
CTNND1-229ENST00000531014 ZNF74Q16587 644 aa6.88□□□□□ -1.31
CTNND1-229ENST00000531014 MEP1BQ16820 701 aa6.88□□□□□ -1.31
CTNND1-229ENST00000531014 PPP1R3AQ16821 1122 aa6.88□□□□□ -1.31
CTNND1-229ENST00000531014 ZMAT1Q5H9K5 638 aa6.88□□□□□ -1.31
CTNND1-229ENST00000531014 HACD4Q5VWC8 232 aa6.88□□□□□ -1.31
CTNND1-229ENST00000531014 CTRB2Q6GPI1 263 aa6.88□□□□□ -1.31
CTNND1-229ENST00000531014 OR4F3Q6IEY1 312 aa6.88□□□□□ -1.31
CTNND1-229ENST00000531014 LRFN4Q6PJG9 635 aa6.88□□□□□ -1.31
CTNND1-229ENST00000531014 KLBQ86Z14 1044 aa6.88□□□□□ -1.31
CTNND1-229ENST00000531014 ACBD7Q8N6N7 88 aa6.88□□□□□ -1.31
CTNND1-229ENST00000531014 BANPQ8N9N5 519 aa6.88□□□□□ -1.31
CTNND1-229ENST00000531014 PPP1R35Q8TAP8 253 aa6.88□□□□□ -1.31
CTNND1-229ENST00000531014 TMEM18Q96B42 140 aa6.88□□□□□ -1.31
CTNND1-229ENST00000531014 MTERF1Q99551 399 aaKnown RBP6.88□□□□□ -1.31
CTNND1-229ENST00000531014 MRPL22Q9NWU5 206 aaKnown RBP6.88□□□□□ -1.31
CTNND1-229ENST00000531014 SIDT1Q9NXL6 827 aaKnown RBP6.88□□□□□ -1.31
CTNND1-229ENST00000531014 TRBV23OR9-2A0A075B6M9 112 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 LOC105369274A0A096LPK9 316 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 A0A1W2PQL4 384 aaPredicted RBP6.87□□□□□ -1.31
CTNND1-229ENST00000531014 MROH6A6NGR9 719 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 YKT6O15498 198 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 MAFO75444 373 aaPredicted RBP6.87□□□□□ -1.31
CTNND1-229ENST00000531014 APBB3O95704 486 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 ZNF17P17021 662 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 MAT2AP31153 395 aaKnown RBP6.87□□□□□ -1.31
CTNND1-229ENST00000531014 HNF4GQ14541 408 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 TMEM35AQ53FP2 167 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 CYBRD1Q53TN4 286 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 AWAT2Q6E213 333 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 TSSK4Q6SA08 328 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 GDPD4Q6W3E5 623 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 IL34Q6ZMJ4 242 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 ZNF551Q7Z340 670 aaPredicted RBP6.87□□□□□ -1.31
CTNND1-229ENST00000531014 FJX1Q86VR8 437 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 SIAH1Q8IUQ4 282 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 FAM217AQ8IXS0 508 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 OR4N4Q8N0Y3 316 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 SYT14Q8NB59 555 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 B3GNT7Q8NFL0 401 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 OR4K15Q8NH41 348 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 OR5AK3PQ8NH89 298 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 PHOSPHO1Q8TCT1 267 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 RNF141Q8WVD5 230 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 LRIG1Q96JA1 1093 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 FCRL1Q96LA6 429 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 CSPG4P5Q96PW8 444 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 C12orf57Q99622 126 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 P2RY13Q9BPV8 354 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 EBF4Q9BQW3 602 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 DPEP3Q9H4B8 488 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 CWH43Q9H720 699 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 GPN2Q9H9Y4 310 aaPredicted RBP6.87□□□□□ -1.31
CTNND1-229ENST00000531014 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.87□□□□□ -1.31
CTNND1-229ENST00000531014 SLC35D1Q9NTN3 355 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 SLC39A9Q9NUM3 307 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 FAM120CQ9NX05 1096 aaKnown RBP6.87□□□□□ -1.31
CTNND1-229ENST00000531014 SPHK1Q9NYA1 384 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 CHRNA9Q9UGM1 479 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 MEIOCA2RUB1 952 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 STC2O76061 302 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 TRAPPC2P0DI81 140 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 TRAPPC2BP0DI82 140 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 CT45A6P0DMU7 189 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 CT45A5P0DMU8 189 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 CT45A7P0DMV0 189 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 CT45A8P0DMV1 189 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 CT45A9P0DMV2 189 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 NTF3P20783 257 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 HOXA11P31270 313 aaPredicted RBP6.87□□□□□ -1.31
CTNND1-229ENST00000531014 ETV4P43268 484 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 CCR8P51685 355 aa6.87□□□□□ -1.31
CTNND1-229ENST00000531014 RPL24P83731 157 aaKnown RBP6.87□□□□□ -1.31
CTNND1-229ENST00000531014 PMS2P3Q13401 168 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms