RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 NSDHLQ15738 373 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 DCST2Q5T1A1 773 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 TYW3Q6IPR3 259 aaKnown RBP13.35□□□□□ -0.27
TTC39A-216ENST00000530004 SHQ1Q6PI26 577 aaKnown RBP13.35□□□□□ -0.27
TTC39A-216ENST00000530004 CARM1Q86X55 608 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 PTPMT1Q8WUK0 201 aaPredicted RBP13.35□□□□□ -0.27
TTC39A-216ENST00000530004 ZG16BQ96DA0 208 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 VSTM2LQ96N03 204 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 LMF2Q9BU23 707 aaKnown RBP13.35□□□□□ -0.27
TTC39A-216ENST00000530004 PINK1Q9BXM7 581 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 OR10A5Q9H207 317 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 IL17BQ9UHF5 180 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 TESMINQ9Y4I5 508 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 MRPS18BQ9Y676 258 aaKnown RBP13.35□□□□□ -0.27
TTC39A-216ENST00000530004 ENPP4Q9Y6X5 453 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 GXYLT2A0PJZ3 443 aa13.34□□□□□ -0.27
TTC39A-216ENST00000530004 DYRK3O43781 588 aa13.34□□□□□ -0.27
TTC39A-216ENST00000530004 ALOX12BO75342 701 aa13.34□□□□□ -0.27
TTC39A-216ENST00000530004 AK1P00568 194 aa13.34□□□□□ -0.27
TTC39A-216ENST00000530004 ALPLP05186 524 aa13.34□□□□□ -0.27
TTC39A-216ENST00000530004 PABPC4LP0CB38 370 aaKnown RBP13.34□□□□□ -0.27
TTC39A-216ENST00000530004 LIFP15018 202 aa13.34□□□□□ -0.27
TTC39A-216ENST00000530004 FPR1P21462 350 aa13.34□□□□□ -0.27
TTC39A-216ENST00000530004 ARHGDIAP52565 204 aa13.34□□□□□ -0.27
TTC39A-216ENST00000530004 POU6F2P78424 691 aaPredicted RBP13.34□□□□□ -0.27
TTC39A-216ENST00000530004 PSG6Q00889 435 aa13.34□□□□□ -0.27
TTC39A-216ENST00000530004 MED21Q13503 144 aa13.34□□□□□ -0.27
TTC39A-216ENST00000530004 LAPTM4AQ15012 233 aa13.34□□□□□ -0.27
TTC39A-216ENST00000530004 NHSL2Q5HYW2 709 aa13.34□□□□□ -0.27
TTC39A-216ENST00000530004 ZNF311Q5JNZ3 666 aa13.34□□□□□ -0.27
TTC39A-216ENST00000530004 COMTD1Q86VU5 262 aa13.34□□□□□ -0.27
TTC39A-216ENST00000530004 VRK2Q86Y07 508 aa13.34□□□□□ -0.27
TTC39A-216ENST00000530004 ZNF615Q8N8J6 731 aa13.34□□□□□ -0.27
TTC39A-216ENST00000530004 C7orf57Q8NEG2 295 aa13.34□□□□□ -0.27
TTC39A-216ENST00000530004 VANGL1Q8TAA9 524 aaPredicted RBP13.34□□□□□ -0.27
TTC39A-216ENST00000530004 KCNE4Q8WWG9 221 aa13.34□□□□□ -0.27
TTC39A-216ENST00000530004 ZNF350Q9GZX5 532 aa13.34□□□□□ -0.27
TTC39A-216ENST00000530004 MTHFD2LQ9H903 347 aaPredicted RBP13.34□□□□□ -0.27
TTC39A-216ENST00000530004 SMURF2Q9HAU4 748 aa13.34□□□□□ -0.27
TTC39A-216ENST00000530004 WDR70Q9NW82 654 aa13.34□□□□□ -0.27
TTC39A-216ENST00000530004 SMPD3Q9NY59 655 aaPredicted RBP13.34□□□□□ -0.27
TTC39A-216ENST00000530004 DTX4Q9Y2E6 619 aa13.34□□□□□ -0.27
TTC39A-216ENST00000530004 FAM32AQ9Y421 112 aaKnown RBP13.34□□□□□ -0.27
TTC39A-216ENST00000530004 CLCA3PQ9Y6N3 262 aa13.34□□□□□ -0.27
TTC39A-216ENST00000530004 NUP210LQ5VU65 1888 aa13.33□□□□□ -0.27
TTC39A-216ENST00000530004 ADAMDEC1O15204 470 aa13.33□□□□□ -0.28
TTC39A-216ENST00000530004 DENRO43583 198 aaKnown RBP13.33□□□□□ -0.28
TTC39A-216ENST00000530004 STX11O75558 287 aa13.33□□□□□ -0.28
TTC39A-216ENST00000530004 DNAJB5O75953 348 aa13.33□□□□□ -0.28
TTC39A-216ENST00000530004 SOX30O94993 753 aa13.33□□□□□ -0.28
TTC39A-216ENST00000530004 EPPINO95925 133 aa13.33□□□□□ -0.28
TTC39A-216ENST00000530004 HPRP00739 348 aa13.33□□□□□ -0.28
TTC39A-216ENST00000530004 CLPSP04118 112 aa13.33□□□□□ -0.28
TTC39A-216ENST00000530004 PRKACGP22612 351 aa13.33□□□□□ -0.28
TTC39A-216ENST00000530004 PPP2R2BQ00005 443 aa13.33□□□□□ -0.28
TTC39A-216ENST00000530004 SPIBQ01892 262 aa13.33□□□□□ -0.28
TTC39A-216ENST00000530004 SSPNQ14714 243 aa13.33□□□□□ -0.28
TTC39A-216ENST00000530004 ELAVL1Q15717 326 aaKnown RBP13.33□□□□□ -0.28
TTC39A-216ENST00000530004 FAAH2Q6GMR7 532 aa13.33□□□□□ -0.28
TTC39A-216ENST00000530004 FIGNL1Q6PIW4 674 aa13.33□□□□□ -0.28
TTC39A-216ENST00000530004 TMEM205Q6UW68 189 aa13.33□□□□□ -0.28
TTC39A-216ENST00000530004 LANCL3Q6ZV70 420 aa13.33□□□□□ -0.28
TTC39A-216ENST00000530004 VASH2Q86V25 355 aa13.33□□□□□ -0.28
TTC39A-216ENST00000530004 OR7G1Q8NGA0 311 aa13.33□□□□□ -0.28
TTC39A-216ENST00000530004 OR4D11Q8NGI4 311 aa13.33□□□□□ -0.28
TTC39A-216ENST00000530004 OR52P1PQ8NH57 321 aa13.33□□□□□ -0.28
TTC39A-216ENST00000530004 C16orf52Q8NHV5 167 aa13.33□□□□□ -0.28
TTC39A-216ENST00000530004 METTL21AQ8WXB1 218 aa13.33□□□□□ -0.28
TTC39A-216ENST00000530004 RMND5BQ96G75 393 aaPredicted RBP13.33□□□□□ -0.28
TTC39A-216ENST00000530004 SENP5Q96HI0 755 aaPredicted RBP13.33□□□□□ -0.28
TTC39A-216ENST00000530004 FBXL20Q96IG2 436 aa13.33□□□□□ -0.28
TTC39A-216ENST00000530004 EPYCQ99645 322 aa13.33□□□□□ -0.28
TTC39A-216ENST00000530004 BARD1Q99728 777 aaKnown RBP13.33□□□□□ -0.28
TTC39A-216ENST00000530004 PIP5K1AQ99755 562 aa13.33□□□□□ -0.28
TTC39A-216ENST00000530004 RBM4BQ9BQ04 359 aaKnown RBP13.33□□□□□ -0.28
TTC39A-216ENST00000530004 WFDC6Q9BQY6 131 aa13.33□□□□□ -0.28
TTC39A-216ENST00000530004 RBM4Q9BWF3 364 aaKnown RBP13.33□□□□□ -0.28
TTC39A-216ENST00000530004 OSBPL10Q9BXB5 764 aa13.33□□□□□ -0.28
TTC39A-216ENST00000530004 TRIM45Q9H8W5 580 aaPredicted RBP13.33□□□□□ -0.28
TTC39A-216ENST00000530004 CACYBPQ9HB71 228 aaKnown RBP13.33□□□□□ -0.28
TTC39A-216ENST00000530004 SYNDIG1LA6NDD5 238 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 M0R3H8 397 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 LGI1O95970 557 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 RHCEP18577 417 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 MMP11P24347 488 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 CDH12P55289 794 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 SRSF6Q13247 344 aaKnown RBP13.32□□□□□ -0.28
TTC39A-216ENST00000530004 GPR68Q15743 365 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 ANKRD34AQ69YU3 496 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 RBM45Q8IUH3 476 aaKnown RBP13.32□□□□□ -0.28
TTC39A-216ENST00000530004 LACC1Q8IV20 430 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 PEX5LQ8IYB4 626 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 ZNF619Q8N2I2 560 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 ZNF321PQ8N8H1 164 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 NRBF2Q96F24 287 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 CNBD2Q96M20 576 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 MESP1Q9BRJ9 268 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 DPH1Q9BZG8 443 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 GABARAPL1Q9H0R8 117 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 FBXO34Q9NWN3 711 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms