RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	CCDC187	A0A096LP49	1063 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	LOC100506127	A0A0U1RQW1	187 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	EFCAB7	A8K855	629 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	CENPBD1	B2RD01	187 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	POLR1C	O15160	346 aa	Predicted RBP	13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	B3GALT2	O43825	422 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	IDH3B	O43837	385 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	CS	O75390	466 aa	Known RBP	13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	GCM2	O75603	506 aa	Predicted RBP	13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	NSA2	O95478	260 aa	Known RBP	13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	ANXA4	P09525	319 aa	Predicted RBP	13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	ZNF888	P0CJ79	500 aa	Predicted RBP	13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	TRAPPC2	P0DI81	140 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	TRAPPC2B	P0DI82	140 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	FGF5	P12034	268 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	BSG	P35613	385 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	AVPR1B	P47901	424 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	MAPK12	P53778	367 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	SELENOW	P63302	87 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	MC2R	Q01718	297 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	RGN	Q15493	299 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	CARTPT	Q16568	116 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	MICA	Q29983	383 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	IFI44L	Q53G44	452 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	RNF130	Q86XS8	419 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	CELF2-AS1	Q8N7Q2	184 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	OR6F1	Q8NGZ6	308 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	LILRB4	Q8NHJ6	448 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	TMCO6	Q96DC7	493 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	CHCHD6	Q9BRQ6	235 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	RACGAP1	Q9H0H5	632 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	GPR83	Q9NYM4	423 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	PHF11	Q9UIL8	331 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	NOX1	Q9Y5S8	564 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540		H0YIG0	161 aa		13.62	□□□□□ -0.23
NR1H3-231	ENST00000529540		H3BMH7	237 aa		13.62	□□□□□ -0.23
NR1H3-231	ENST00000529540	SAP18	O00422	153 aa	Known RBP	13.62	□□□□□ -0.23
NR1H3-231	ENST00000529540	CASC3	O15234	703 aa	Known RBP	13.62	□□□□□ -0.23
NR1H3-231	ENST00000529540	MPZL2	O60487	215 aa		13.62	□□□□□ -0.23
NR1H3-231	ENST00000529540	SH3BGRL	O75368	114 aa		13.62	□□□□□ -0.23
NR1H3-231	ENST00000529540	UGT2B17	O75795	530 aa		13.62	□□□□□ -0.23
NR1H3-231	ENST00000529540	KLK1	P06870	262 aa		13.62	□□□□□ -0.23
NR1H3-231	ENST00000529540	LAMP1	P11279	417 aa		13.62	□□□□□ -0.23
NR1H3-231	ENST00000529540	PIP	P12273	146 aa	Predicted RBP	13.62	□□□□□ -0.23
NR1H3-231	ENST00000529540	ATP5A1	P25705	553 aa	Known RBP	13.62	□□□□□ -0.23
NR1H3-231	ENST00000529540	NKX2-5	P52952	324 aa	Predicted RBP	13.62	□□□□□ -0.23
NR1H3-231	ENST00000529540	OR2B6	P58173	313 aa		13.62	□□□□□ -0.23
NR1H3-231	ENST00000529540	COPZ1	P61923	177 aa		13.62	□□□□□ -0.23
NR1H3-231	ENST00000529540	ST3GAL4	Q11206	333 aa		13.62	□□□□□ -0.23
NR1H3-231	ENST00000529540	HEPACAM	Q14CZ8	416 aa		13.62	□□□□□ -0.23
NR1H3-231	ENST00000529540	CEACAM20	Q6UY09	585 aa		13.62	□□□□□ -0.23
NR1H3-231	ENST00000529540	RAB11FIP2	Q7L804	512 aa		13.62	□□□□□ -0.23
NR1H3-231	ENST00000529540	ATCAY	Q86WG3	371 aa		13.62	□□□□□ -0.23
NR1H3-231	ENST00000529540	NLGN4X	Q8N0W4	816 aa		13.62	□□□□□ -0.23
NR1H3-231	ENST00000529540	OR1L3	Q8NH93	324 aa		13.62	□□□□□ -0.23
NR1H3-231	ENST00000529540	ZCCHC10	Q8TBK6	192 aa		13.62	□□□□□ -0.23
NR1H3-231	ENST00000529540		Q96MT0	163 aa		13.62	□□□□□ -0.23
NR1H3-231	ENST00000529540	SLC30A2	Q9BRI3	323 aa		13.62	□□□□□ -0.23
NR1H3-231	ENST00000529540	FAIM2	Q9BWQ8	316 aa		13.62	□□□□□ -0.23
NR1H3-231	ENST00000529540	TAPBPL	Q9BX59	468 aa		13.62	□□□□□ -0.23
NR1H3-231	ENST00000529540	ZNF717	Q9BY31	904 aa	Predicted RBP	13.62	□□□□□ -0.23
NR1H3-231	ENST00000529540	KLHL31	Q9H511	634 aa		13.62	□□□□□ -0.23
NR1H3-231	ENST00000529540	SYNPO2L	Q9H987	977 aa		13.62	□□□□□ -0.23
NR1H3-231	ENST00000529540	PRDM9	Q9NQV7	894 aa		13.62	□□□□□ -0.23
NR1H3-231	ENST00000529540	PRDM7	Q9NQW5	492 aa		13.62	□□□□□ -0.23
NR1H3-231	ENST00000529540	CUTC	Q9NTM9	273 aa		13.62	□□□□□ -0.23
NR1H3-231	ENST00000529540	ZNF282	Q9UDV7	671 aa	Predicted RBP	13.62	□□□□□ -0.23
NR1H3-231	ENST00000529540	VPS4A	Q9UN37	437 aa		13.62	□□□□□ -0.23
NR1H3-231	ENST00000529540	LOXL2	Q9Y4K0	774 aa		13.62	□□□□□ -0.23
NR1H3-231	ENST00000529540	MDC1	Q14676	2089 aa	Known RBP	13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540		A0A0A6YYD5	115 aa		13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	SPAAR	A0A1B0GVQ0	90 aa		13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	ARRDC5	A6NEK1	342 aa		13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	HCRTR1	O43613	425 aa		13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	KIAA0513	O60268	411 aa		13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	GALR3	O60755	368 aa	Predicted RBP	13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	SLITRK5	O94991	958 aa		13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	NUDT7	P0C024	238 aa		13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	JMJD7	P0C870	316 aa		13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	ITGA2	P17301	1181 aa		13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	ENDOU	P21128	410 aa	Known RBP	13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	DDOST	P39656	456 aa		13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	SLC15A1	P46059	708 aa		13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	HTR3A	P46098	478 aa		13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	RAB8A	P61006	207 aa		13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	BTN3A2	P78410	334 aa		13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	RBBP4	Q09028	425 aa		13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	DEFB134	Q4QY38	66 aa		13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	ATAD3C	Q5T2N8	411 aa		13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	RHBDD2	Q6NTF9	364 aa		13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	UBE3D	Q7Z6J8	389 aa		13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	KRT73	Q86Y46	540 aa		13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	LGI4	Q8N135	537 aa		13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	CYP4Z2P	Q8N1L4	340 aa		13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	ARHGEF39	Q8N4T4	335 aa		13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	BMPER	Q8N8U9	685 aa		13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	ACOT4	Q8N9L9	421 aa		13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	VPS37A	Q8NEZ2	397 aa		13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	WDR36	Q8NI36	951 aa	Known RBP	13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	COQ8B	Q96D53	544 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms