RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 MRGPREQ86SM8 312 aa13.74□□□□□ -0.21
ECHDC1-220ENST00000528402 GRAMD2AQ8IUY3 354 aa13.74□□□□□ -0.21
ECHDC1-220ENST00000528402 CLDN22Q8N7P3 220 aa13.74□□□□□ -0.21
ECHDC1-220ENST00000528402 OR52R1Q8NGF1 315 aa13.74□□□□□ -0.21
ECHDC1-220ENST00000528402 TEX47Q8TBZ9 253 aa13.74□□□□□ -0.21
ECHDC1-220ENST00000528402 OSTF1Q92882 214 aa13.74□□□□□ -0.21
ECHDC1-220ENST00000528402 SLC38A2Q96QD8 506 aa13.74□□□□□ -0.21
ECHDC1-220ENST00000528402 G6PC3Q9BUM1 346 aa13.74□□□□□ -0.21
ECHDC1-220ENST00000528402 ALOXE3Q9BYJ1 711 aa13.74□□□□□ -0.21
ECHDC1-220ENST00000528402 PLGRKTQ9HBL7 147 aa13.74□□□□□ -0.21
ECHDC1-220ENST00000528402 SEMA4GQ9NTN9 838 aa13.74□□□□□ -0.21
ECHDC1-220ENST00000528402 IRAK4Q9NWZ3 460 aa13.74□□□□□ -0.21
ECHDC1-220ENST00000528402 PRODH2Q9UF12 536 aa13.74□□□□□ -0.21
ECHDC1-220ENST00000528402 TESQ9UGI8 421 aaKnown RBP13.74□□□□□ -0.21
ECHDC1-220ENST00000528402 SCN2AQ99250 2005 aa13.74□□□□□ -0.21
ECHDC1-220ENST00000528402 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 A0A1W2PPW3 197 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 C19orf67A6NJJ6 358 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 CPSF4LA6NMK7 179 aaKnown RBP13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 HRO43593 1189 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 DUX1O43812 170 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 PRAMEF2O60811 474 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 TP53P04637 393 aaPredicted RBP13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 CT62P0C5K7 136 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 MSL3P1P0C860 447 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 GNSP15586 552 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 TNNI3P19429 210 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 TRHRP34981 398 aaPredicted RBP13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 ARRB1P49407 418 aaPredicted RBP13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 PCYT1AP49585 367 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 ARL4DP49703 201 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 HSD11B2P80365 405 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 ZNF155Q12901 538 aaPredicted RBP13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 GINS1Q14691 196 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 MOGQ16653 247 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 TMEM236Q5W0B7 351 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 SLC16A12Q6ZSM3 486 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 ZNF367Q7RTV3 350 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 GDF7Q7Z4P5 450 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 CYP4Z2PQ8N1L4 340 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 B3GNT7Q8NFL0 401 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 OR7G1Q8NGA0 311 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 MMABQ96EY8 250 aaPredicted RBP13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 PEX11GQ96HA9 241 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 HS6ST2Q96MM7 605 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 OR1F2PQ96R84 312 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 ZNF559Q9BR84 538 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 DCUN1D5Q9BTE7 237 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 GPR55Q9Y2T6 319 aaPredicted RBP13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 HEMK1Q9Y5R4 338 aaPredicted RBP13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 RNF215Q9Y6U7 377 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 LAMA3Q16787 3333 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 IGHV1OR21-1A0A087WYE8 117 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 IGHV5-51A0A0C4DH38 117 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 CDHR4A6H8M9 788 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 TPST2O60704 377 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 KCNK2O95069 426 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 CDK4P11802 303 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 PNLIPP16233 465 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 DRD5P21918 477 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 BCKDHBP21953 392 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 CALRP27797 417 aaKnown RBP13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 OMPP47874 163 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 SERPINB10P48595 397 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 TUBA1BP68363 451 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 FUT7Q11130 342 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 EXOSC7Q15024 291 aaKnown RBP13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 CTF1Q16619 201 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 KLHL22Q53GT1 634 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 MFSD4BQ5TF39 518 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 SLC27A4Q6P1M0 643 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 ZNF613Q6PF04 617 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 TUBA1AQ71U36 451 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 PRICKLE2Q7Z3G6 844 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 WDR53Q7Z5U6 358 aaPredicted RBP13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 CMIPQ8IY22 773 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 OR51Q1Q8NH59 317 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 TMEM80Q96HE8 168 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 FOLH1BQ9HBA9 442 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 TMEM27Q9HBJ8 222 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 Q9N2J8 555 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 MED17Q9NVC6 651 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 HCN3Q9P1Z3 774 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 GMEB2Q9UKD1 530 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 TMEM5Q9Y2B1 443 aa13.73□□□□□ -0.21
ECHDC1-220ENST00000528402 M0R3G1 203 aa13.72□□□□□ -0.21
ECHDC1-220ENST00000528402 TOX3O15405 576 aaPredicted RBP13.72□□□□□ -0.21
ECHDC1-220ENST00000528402 DYRK3O43781 588 aa13.72□□□□□ -0.21
ECHDC1-220ENST00000528402 HMGN1P05114 100 aa13.72□□□□□ -0.21
ECHDC1-220ENST00000528402 STSP08842 583 aa13.72□□□□□ -0.21
ECHDC1-220ENST00000528402 CD36P16671 472 aa13.72□□□□□ -0.21
ECHDC1-220ENST00000528402 CD1CP29017 333 aa13.72□□□□□ -0.21
ECHDC1-220ENST00000528402 C21orf33P30042 268 aaPredicted RBP13.72□□□□□ -0.21
ECHDC1-220ENST00000528402 CSTF2P33240 577 aaKnown RBP eCLIP13.72□□□□□ -0.21
ECHDC1-220ENST00000528402 UGT2B10P36537 528 aa13.72□□□□□ -0.21
ECHDC1-220ENST00000528402 EMDP50402 254 aa13.72□□□□□ -0.21
ECHDC1-220ENST00000528402 ZNF136P52737 540 aa13.72□□□□□ -0.21
ECHDC1-220ENST00000528402 GFERP55789 205 aa13.72□□□□□ -0.21
ECHDC1-220ENST00000528402 EFNB1P98172 346 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms