RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 PLCL2Q9UPR0 1127 aa5□□□□□ -1.61
PCF11-202ENST00000528336 USP42Q9H9J4 1324 aaKnown RBP4.99□□□□□ -1.61
PCF11-202ENST00000528336 LAMB4A4D0S4 1761 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 A0A087X0K7 114 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 TRAV24A0A0B4J272 114 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 MEI4A8MW99 385 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 WASH3PC4AMC7 463 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 CBR3O75828 277 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 ZFAND5O76080 213 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 LUC7L3O95232 432 aaKnown RBP4.99□□□□□ -1.61
PCF11-202ENST00000528336 SMC2O95347 1197 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 SEC24AO95486 1093 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 OPN1LWP04000 364 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 SLC2A2P11168 524 aaPredicted RBP4.99□□□□□ -1.61
PCF11-202ENST00000528336 MYL6BP14649 208 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 ATP5C1P36542 298 aaKnown RBP4.99□□□□□ -1.61
PCF11-202ENST00000528336 HSD17B3P37058 310 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 GRIA1P42261 906 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 SLC1A6P48664 564 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 ACADVLP49748 655 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 RGS4P49798 205 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 CSNK2BP67870 215 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 CBX1P83916 185 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 XRCC4Q13426 336 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 ENPP2Q13822 863 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 COTL1Q14019 142 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 GK2Q14410 553 aaPredicted RBP4.99□□□□□ -1.61
PCF11-202ENST00000528336 FCN2Q15485 313 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 EXT1Q16394 746 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 MAPK6Q16659 721 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 ADPRMQ3LIE5 342 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 GPR33Q49SQ1 333 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 LACTB2Q53H82 288 aaPredicted RBP4.99□□□□□ -1.61
PCF11-202ENST00000528336 SEL1L3Q68CR1 1132 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 LRRC8BQ6P9F7 803 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 FAM159AQ6UWV7 190 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 TRMT11Q7Z4G4 463 aaKnown RBP4.99□□□□□ -1.61
PCF11-202ENST00000528336 YRDCQ86U90 279 aaKnown RBP4.99□□□□□ -1.61
PCF11-202ENST00000528336 ECHDC2Q86YB7 292 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 GCNT2Q8N0V5 402 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 ZNF614Q8N883 585 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 OR9K2Q8NGE7 335 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 CHPT1Q8WUD6 406 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 APOBEC4Q8WW27 367 aaKnown RBP4.99□□□□□ -1.61
PCF11-202ENST00000528336 EMG1Q92979 244 aaKnown RBP4.99□□□□□ -1.61
PCF11-202ENST00000528336 POM121L2Q96KW2 1035 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 CHP1Q99653 195 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 NKX3-1Q99801 234 aaPredicted RBP4.99□□□□□ -1.61
PCF11-202ENST00000528336 UQCC2Q9BRT2 126 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 WWTR1Q9GZV5 400 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 CYP3A43Q9HB55 503 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 NEK6Q9HC98 313 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 ZDHHC18Q9NUE0 388 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 CD300AQ9UGN4 299 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 NARFQ9UHQ1 456 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 MAN1B1Q9UKM7 699 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 SLC9A8Q9Y2E8 581 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 SRCAPQ6ZRS2 3230 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 QSER1Q2KHR3 1735 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 MYH15Q9Y2K3 1946 aa4.99□□□□□ -1.61
PCF11-202ENST00000528336 UBR3Q6ZT12 1888 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 MYH14Q7Z406 1995 aaKnown RBP4.98□□□□□ -1.61
PCF11-202ENST00000528336 IGLV7-46A0A075B6I9 117 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 TMEM129A0AVI4 362 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 ASB14A6NK59 587 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 GABRR3A8MPY1 467 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 ERVV-1B6SEH8 477 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 CCL24O00175 119 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 TRDMT1O14717 391 aaKnown RBP4.98□□□□□ -1.61
PCF11-202ENST00000528336 ADAM12O43184 909 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 SAP30O75446 220 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 NXPH2O95156 264 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 TGM6O95932 706 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 NDUFB10O96000 172 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 MT-ND1P03886 318 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 HLA-FP30511 346 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 CHI3L1P36222 383 aaPredicted RBP4.98□□□□□ -1.61
PCF11-202ENST00000528336 OPRL1P41146 370 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 HTR2BP41595 481 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 DNA2P51530 1060 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 CLDN15P56746 228 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 MYL7Q01449 175 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 BST1Q10588 318 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 ILF2Q12905 390 aaKnown RBP4.98□□□□□ -1.61
PCF11-202ENST00000528336 ZNF74Q16587 644 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 FAM83EQ2M2I3 478 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 EXOC3L2Q2M3D2 409 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 CTU2Q2VPK5 515 aaKnown RBP4.98□□□□□ -1.61
PCF11-202ENST00000528336 HLA-BQ31612 363 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 LYSMD4Q5XG99 296 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 SMIM5Q71RC9 77 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 MTERF4Q7Z6M4 381 aaKnown RBP4.98□□□□□ -1.61
PCF11-202ENST00000528336 TPRA1Q86W33 373 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 ANKRD46Q86W74 232 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 CCDC65Q8IXS2 484 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 SYCE1Q8N0S2 351 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 UBE2J2Q8N2K1 259 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 CCDC63Q8NA47 563 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 MITD1Q8WV92 249 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 ANKRD7Q92527 254 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms