RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 CARNS1A5YM72 827 aa13.74□□□□□ -0.21
CAPN1-214ENST00000528165 SLC9B1P1A6NJY1 282 aa13.74□□□□□ -0.21
CAPN1-214ENST00000528165 ZNF593O00488 134 aaPredicted RBP13.74□□□□□ -0.21
CAPN1-214ENST00000528165 MTRF1O75570 445 aaKnown RBP13.74□□□□□ -0.21
CAPN1-214ENST00000528165 POP4O95707 220 aaKnown RBP13.74□□□□□ -0.21
CAPN1-214ENST00000528165 URODP06132 367 aa13.74□□□□□ -0.21
CAPN1-214ENST00000528165 DRD2P14416 443 aa13.74□□□□□ -0.21
CAPN1-214ENST00000528165 ZP1P60852 638 aa13.74□□□□□ -0.21
CAPN1-214ENST00000528165 OPCMLQ14982 345 aa13.74□□□□□ -0.21
CAPN1-214ENST00000528165 GPR162Q16538 588 aa13.74□□□□□ -0.21
CAPN1-214ENST00000528165 SLC8B1Q6J4K2 584 aa13.74□□□□□ -0.21
CAPN1-214ENST00000528165 Q6ZNB5 142 aa13.74□□□□□ -0.21
CAPN1-214ENST00000528165 NLRC3Q7RTR2 1065 aa13.74□□□□□ -0.21
CAPN1-214ENST00000528165 OR51G2Q8NGK0 314 aa13.74□□□□□ -0.21
CAPN1-214ENST00000528165 OR6M1Q8NGM8 313 aa13.74□□□□□ -0.21
CAPN1-214ENST00000528165 OR4Q3Q8NH05 313 aa13.74□□□□□ -0.21
CAPN1-214ENST00000528165 CPEB1Q9BZB8 566 aaKnown RBP13.74□□□□□ -0.21
CAPN1-214ENST00000528165 KCNMB2Q9Y691 235 aa13.74□□□□□ -0.21
CAPN1-214ENST00000528165 SIRT4Q9Y6E7 314 aaPredicted RBP13.74□□□□□ -0.21
CAPN1-214ENST00000528165 PLPP1O14494 284 aa13.74□□□□□ -0.21
CAPN1-214ENST00000528165 EPPINO95925 133 aa13.74□□□□□ -0.21
CAPN1-214ENST00000528165 MT-ND4P03905 459 aa13.74□□□□□ -0.21
CAPN1-214ENST00000528165 RB1P06400 928 aa13.74□□□□□ -0.21
CAPN1-214ENST00000528165 CKBP12277 381 aa13.74□□□□□ -0.21
CAPN1-214ENST00000528165 PRLHRP49683 370 aa13.74□□□□□ -0.21
CAPN1-214ENST00000528165 SELENOPP49908 381 aa13.74□□□□□ -0.21
CAPN1-214ENST00000528165 BLVRAP53004 296 aa13.74□□□□□ -0.21
CAPN1-214ENST00000528165 DGCR2P98153 550 aa13.74□□□□□ -0.21
CAPN1-214ENST00000528165 PITPNAQ00169 270 aa13.74□□□□□ -0.21
CAPN1-214ENST00000528165 SNTB2Q13425 540 aaKnown RBP13.74□□□□□ -0.21
CAPN1-214ENST00000528165 FZD5Q13467 585 aa13.74□□□□□ -0.21
CAPN1-214ENST00000528165 TUSC1Q2TAM9 212 aa13.74□□□□□ -0.21
CAPN1-214ENST00000528165 FAM27D1Q5T7N8 215 aa13.74□□□□□ -0.21
CAPN1-214ENST00000528165 TRAM1L1Q8N609 369 aa13.74□□□□□ -0.21
CAPN1-214ENST00000528165 SIRT6Q8N6T7 355 aa13.74□□□□□ -0.21
CAPN1-214ENST00000528165 ZNF527Q8NB42 609 aa13.74□□□□□ -0.21
CAPN1-214ENST00000528165 UXS1Q8NBZ7 420 aa13.74□□□□□ -0.21
CAPN1-214ENST00000528165 TM4SF18Q96CE8 201 aa13.74□□□□□ -0.21
CAPN1-214ENST00000528165 NKIRAS2Q9NYR9 191 aa13.74□□□□□ -0.21
CAPN1-214ENST00000528165 POMT2Q9UKY4 750 aa13.74□□□□□ -0.21
CAPN1-214ENST00000528165 NPTNQ9Y639 398 aa13.74□□□□□ -0.21
CAPN1-214ENST00000528165 CSNK1G3Q9Y6M4 447 aa13.74□□□□□ -0.21
CAPN1-214ENST00000528165 UBL3O95164 117 aa13.73□□□□□ -0.21
CAPN1-214ENST00000528165 DRD5P21918 477 aa13.73□□□□□ -0.21
CAPN1-214ENST00000528165 PAICSP22234 425 aaKnown RBP13.73□□□□□ -0.21
CAPN1-214ENST00000528165 PCBP4P57723 403 aaKnown RBP13.73□□□□□ -0.21
CAPN1-214ENST00000528165 SLC22A10Q63ZE4 541 aa13.73□□□□□ -0.21
CAPN1-214ENST00000528165 TMEM220Q6QAJ8 160 aa13.73□□□□□ -0.21
CAPN1-214ENST00000528165 ARL9Q6T311 187 aa13.73□□□□□ -0.21
CAPN1-214ENST00000528165 C3P1Q6ZMU1 363 aa13.73□□□□□ -0.21
CAPN1-214ENST00000528165 CFAP77Q6ZQR2 320 aa13.73□□□□□ -0.21
CAPN1-214ENST00000528165 TPRA1Q86W33 373 aa13.73□□□□□ -0.21
CAPN1-214ENST00000528165 BBS10Q8TAM1 723 aa13.73□□□□□ -0.21
CAPN1-214ENST00000528165 PIGXQ8TBF5 258 aa13.73□□□□□ -0.21
CAPN1-214ENST00000528165 SOCS4Q8WXH5 440 aa13.73□□□□□ -0.21
CAPN1-214ENST00000528165 FAM83CQ9BQN1 747 aa13.73□□□□□ -0.21
CAPN1-214ENST00000528165 C7orf50Q9BRJ6 194 aaKnown RBP13.73□□□□□ -0.21
CAPN1-214ENST00000528165 TDP1Q9NUW8 608 aa13.73□□□□□ -0.21
CAPN1-214ENST00000528165 OR6C2Q9NZP2 312 aa13.73□□□□□ -0.21
CAPN1-214ENST00000528165 MFSD2BA6NFX1 497 aa13.73□□□□□ -0.21
CAPN1-214ENST00000528165 HPXP02790 462 aa13.73□□□□□ -0.21
CAPN1-214ENST00000528165 MMP15P51511 669 aa13.73□□□□□ -0.21
CAPN1-214ENST00000528165 TRAM2Q15035 370 aa13.73□□□□□ -0.21
CAPN1-214ENST00000528165 NHLRC3Q5JS37 347 aa13.73□□□□□ -0.21
CAPN1-214ENST00000528165 TCTE1Q5JU00 501 aa13.73□□□□□ -0.21
CAPN1-214ENST00000528165 SDR16C5Q8N3Y7 309 aa13.73□□□□□ -0.21
CAPN1-214ENST00000528165 ACBD7Q8N6N7 88 aa13.73□□□□□ -0.21
CAPN1-214ENST00000528165 FBXW5Q969U6 566 aa13.73□□□□□ -0.21
CAPN1-214ENST00000528165 SGTBQ96EQ0 304 aa13.73□□□□□ -0.21
CAPN1-214ENST00000528165 WBP1Q96G27 269 aa13.73□□□□□ -0.21
CAPN1-214ENST00000528165 SFXN2Q96NB2 322 aa13.73□□□□□ -0.21
CAPN1-214ENST00000528165 CAMK1GQ96NX5 476 aa13.73□□□□□ -0.21
CAPN1-214ENST00000528165 ALG8Q9BVK2 526 aa13.73□□□□□ -0.21
CAPN1-214ENST00000528165 REG4Q9BYZ8 158 aa13.73□□□□□ -0.21
CAPN1-214ENST00000528165 TRIM36Q9NQ86 728 aa13.73□□□□□ -0.21
CAPN1-214ENST00000528165 MED17Q9NVC6 651 aa13.73□□□□□ -0.21
CAPN1-214ENST00000528165 LRRN3E7EW58 273 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 G3V3Q6 166 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 SOCS6O14544 535 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 PGRMC2O15173 223 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 EPHA4P54764 986 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 PGGHGQ32M88 737 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 CEACAM19Q7Z692 300 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 CHST14Q8NCH0 376 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 LSM14AQ8ND56 463 aaKnown RBP13.72□□□□□ -0.21
CAPN1-214ENST00000528165 OR9A1PQ8NGU1 263 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 FIBINQ8TAL6 211 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 CASD1Q96PB1 797 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 DDOQ99489 341 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 TBX5Q99593 518 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 FAIM2Q9BWQ8 316 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 JAM3Q9BX67 310 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 CHIAQ9BZP6 476 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 SHARPINQ9H0F6 387 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 LRRN3Q9H3W5 708 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 NLGN3Q9NZ94 848 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 LSM7Q9UK45 103 aaKnown RBP13.72□□□□□ -0.21
CAPN1-214ENST00000528165 CHST2Q9Y4C5 530 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 PLXND1Q9Y4D7 1925 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 TBX19O60806 448 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms