RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 TMEM107Q6UX40 140 aa12.88□□□□□ -0.35
CAPN1-212ENST00000527887 C9orf106Q8NAJ2 232 aa12.88□□□□□ -0.35
CAPN1-212ENST00000527887 OR4K17Q8NGC6 315 aa12.88□□□□□ -0.35
CAPN1-212ENST00000527887 CDC26Q8NHZ8 85 aa12.88□□□□□ -0.35
CAPN1-212ENST00000527887 MAGEB18Q96M61 343 aa12.88□□□□□ -0.35
CAPN1-212ENST00000527887 SFXN2Q96NB2 322 aa12.88□□□□□ -0.35
CAPN1-212ENST00000527887 TUBA1CQ9BQE3 449 aa12.88□□□□□ -0.35
CAPN1-212ENST00000527887 LMF2Q9BU23 707 aaKnown RBP12.88□□□□□ -0.35
CAPN1-212ENST00000527887 POLDIP3Q9BY77 421 aaKnown RBP12.88□□□□□ -0.35
CAPN1-212ENST00000527887 PIGMQ9H3S5 423 aa12.88□□□□□ -0.35
CAPN1-212ENST00000527887 LRTM1Q9HBL6 345 aa12.88□□□□□ -0.35
CAPN1-212ENST00000527887 DKKL1Q9UK85 242 aa12.88□□□□□ -0.35
CAPN1-212ENST00000527887 FBXL2Q9UKC9 423 aa12.88□□□□□ -0.35
CAPN1-212ENST00000527887 POLR3HQ9Y535 204 aaPredicted RBP12.88□□□□□ -0.35
CAPN1-212ENST00000527887 GMNCA6NCL1 334 aa12.87□□□□□ -0.35
CAPN1-212ENST00000527887 TUBAL3A6NHL2 446 aa12.87□□□□□ -0.35
CAPN1-212ENST00000527887 KDM4EB2RXH2 506 aaPredicted RBP12.87□□□□□ -0.35
CAPN1-212ENST00000527887 KLF11O14901 512 aa12.87□□□□□ -0.35
CAPN1-212ENST00000527887 AZIN1O14977 448 aa12.87□□□□□ -0.35
CAPN1-212ENST00000527887 FADS1O60427 444 aa12.87□□□□□ -0.35
CAPN1-212ENST00000527887 SPAG7O75391 227 aa12.87□□□□□ -0.35
CAPN1-212ENST00000527887 IL33O95760 270 aa12.87□□□□□ -0.35
CAPN1-212ENST00000527887 CRHP06850 196 aa12.87□□□□□ -0.35
CAPN1-212ENST00000527887 PEPDP12955 493 aa12.87□□□□□ -0.35
CAPN1-212ENST00000527887 ZNF708P17019 499 aa12.87□□□□□ -0.35
CAPN1-212ENST00000527887 PCYT1AP49585 367 aa12.87□□□□□ -0.35
CAPN1-212ENST00000527887 DIO3P55073 304 aa12.87□□□□□ -0.35
CAPN1-212ENST00000527887 WNT3P56703 355 aa12.87□□□□□ -0.35
CAPN1-212ENST00000527887 RIPPLY3P57055 190 aa12.87□□□□□ -0.35
CAPN1-212ENST00000527887 OCRLQ01968 901 aa12.87□□□□□ -0.35
CAPN1-212ENST00000527887 GLYR1Q49A26 553 aaPredicted RBP12.87□□□□□ -0.35
CAPN1-212ENST00000527887 VPS26BQ4G0F5 336 aa12.87□□□□□ -0.35
CAPN1-212ENST00000527887 OR2A2Q6IF42 318 aa12.87□□□□□ -0.35
CAPN1-212ENST00000527887 CHMP1BQ7LBR1 199 aa12.87□□□□□ -0.35
CAPN1-212ENST00000527887 FADS6Q8N9I5 356 aa12.87□□□□□ -0.35
CAPN1-212ENST00000527887 OR4N2Q8NGD1 307 aa12.87□□□□□ -0.35
CAPN1-212ENST00000527887 CEP70Q8NHQ1 597 aa12.87□□□□□ -0.35
CAPN1-212ENST00000527887 ZFP28Q8NHY6 868 aa12.87□□□□□ -0.35
CAPN1-212ENST00000527887 DYDC1Q8WWB3 177 aa12.87□□□□□ -0.35
CAPN1-212ENST00000527887 EFHD2Q96C19 240 aaPredicted RBP12.87□□□□□ -0.35
CAPN1-212ENST00000527887 FCRL1Q96LA6 429 aa12.87□□□□□ -0.35
CAPN1-212ENST00000527887 CCT7Q99832 543 aa12.87□□□□□ -0.35
CAPN1-212ENST00000527887 FOXC2Q99958 501 aa12.87□□□□□ -0.35
CAPN1-212ENST00000527887 CLEC4MQ9H2X3 399 aaPredicted RBP12.87□□□□□ -0.35
CAPN1-212ENST00000527887 PTGES2Q9H7Z7 377 aa12.87□□□□□ -0.35
CAPN1-212ENST00000527887 FAM120CQ9NX05 1096 aaKnown RBP12.87□□□□□ -0.35
CAPN1-212ENST00000527887 PPP4R1LQ9P1A2 415 aa12.87□□□□□ -0.35
CAPN1-212ENST00000527887 CLCA1A8K7I4 914 aa12.86□□□□□ -0.35
CAPN1-212ENST00000527887 EEF1E1-BLOC1S5C9J1V9 151 aa12.86□□□□□ -0.35
CAPN1-212ENST00000527887 EEF1E1O43324 174 aaKnown RBP12.86□□□□□ -0.35
CAPN1-212ENST00000527887 HCRTR2O43614 444 aa12.86□□□□□ -0.35
CAPN1-212ENST00000527887 KCNH1O95259 989 aa12.86□□□□□ -0.35
CAPN1-212ENST00000527887 FGF4P08620 206 aa12.86□□□□□ -0.35
CAPN1-212ENST00000527887 PRPS2P11908 318 aa12.86□□□□□ -0.35
CAPN1-212ENST00000527887 ASMTP46597 345 aa12.86□□□□□ -0.35
CAPN1-212ENST00000527887 ART1P52961 327 aa12.86□□□□□ -0.35
CAPN1-212ENST00000527887 CLDN18P56856 261 aa12.86□□□□□ -0.35
CAPN1-212ENST00000527887 SRYQ05066 204 aa12.86□□□□□ -0.35
CAPN1-212ENST00000527887 PRSS53Q2L4Q9 553 aa12.86□□□□□ -0.35
CAPN1-212ENST00000527887 SH2D4BQ5SQS7 431 aa12.86□□□□□ -0.35
CAPN1-212ENST00000527887 OR5M10Q6IEU7 315 aa12.86□□□□□ -0.35
CAPN1-212ENST00000527887 ZCCHC12Q6PEW1 402 aa12.86□□□□□ -0.35
CAPN1-212ENST00000527887 C10orf107Q8IVU9 208 aa12.86□□□□□ -0.35
CAPN1-212ENST00000527887 ANKRD42Q8N9B4 389 aa12.86□□□□□ -0.35
CAPN1-212ENST00000527887 HOXB13Q92826 284 aaPredicted RBP12.86□□□□□ -0.35
CAPN1-212ENST00000527887 MTERF3Q96E29 417 aa12.86□□□□□ -0.35
CAPN1-212ENST00000527887 ZBED6CLQ96FA7 236 aaPredicted RBP12.86□□□□□ -0.35
CAPN1-212ENST00000527887 CHMP6Q96FZ7 201 aa12.86□□□□□ -0.35
CAPN1-212ENST00000527887 RMND5BQ96G75 393 aaPredicted RBP12.86□□□□□ -0.35
CAPN1-212ENST00000527887 ZNF317Q96PQ6 595 aaPredicted RBP12.86□□□□□ -0.35
CAPN1-212ENST00000527887 GPATCH1Q9BRR8 931 aaKnown RBP12.86□□□□□ -0.35
CAPN1-212ENST00000527887 REEP4Q9H6H4 257 aa12.86□□□□□ -0.35
CAPN1-212ENST00000527887 EML4Q9HC35 981 aaKnown RBP12.86□□□□□ -0.35
CAPN1-212ENST00000527887 ACSS1Q9NUB1 689 aaPredicted RBP12.86□□□□□ -0.35
CAPN1-212ENST00000527887 NTMQ9P121 344 aa12.86□□□□□ -0.35
CAPN1-212ENST00000527887 CLCF1Q9UBD9 225 aa12.86□□□□□ -0.35
CAPN1-212ENST00000527887 PDPK1O15530 556 aa12.85□□□□□ -0.35
CAPN1-212ENST00000527887 NPHS1O60500 1241 aa12.85□□□□□ -0.35
CAPN1-212ENST00000527887 FAM107AO95990 144 aa12.85□□□□□ -0.35
CAPN1-212ENST00000527887 TACR1P25103 407 aa12.85□□□□□ -0.35
CAPN1-212ENST00000527887 LCN1P31025 176 aa12.85□□□□□ -0.35
CAPN1-212ENST00000527887 GPC1P35052 558 aa12.85□□□□□ -0.35
CAPN1-212ENST00000527887 STARP49675 285 aa12.85□□□□□ -0.35
CAPN1-212ENST00000527887 IST1P53990 364 aa12.85□□□□□ -0.35
CAPN1-212ENST00000527887 C17orf67Q0P5P2 114 aa12.85□□□□□ -0.35
CAPN1-212ENST00000527887 CLEC6AQ6EIG7 209 aa12.85□□□□□ -0.35
CAPN1-212ENST00000527887 Q6ZSR9 355 aa12.85□□□□□ -0.35
CAPN1-212ENST00000527887 R3HCC1LQ7Z5L2 792 aaKnown RBP12.85□□□□□ -0.35
CAPN1-212ENST00000527887 GRAMD2AQ8IUY3 354 aa12.85□□□□□ -0.35
CAPN1-212ENST00000527887 MEIOBQ8N635 442 aa12.85□□□□□ -0.35
CAPN1-212ENST00000527887 CDRT4Q8N9R6 151 aa12.85□□□□□ -0.35
CAPN1-212ENST00000527887 OR2M3Q8NG83 312 aa12.85□□□□□ -0.35
CAPN1-212ENST00000527887 EGLN2Q96KS0 407 aa12.85□□□□□ -0.35
CAPN1-212ENST00000527887 DACH2Q96NX9 599 aa12.85□□□□□ -0.35
CAPN1-212ENST00000527887 PIGQQ9BRB3 760 aa12.85□□□□□ -0.35
CAPN1-212ENST00000527887 G6PC3Q9BUM1 346 aa12.85□□□□□ -0.35
CAPN1-212ENST00000527887 GATA5Q9BWX5 397 aaPredicted RBP12.85□□□□□ -0.35
CAPN1-212ENST00000527887 RBM24Q9BX46 236 aaKnown RBP12.85□□□□□ -0.35
CAPN1-212ENST00000527887 CXXC4Q9H2H0 198 aa12.85□□□□□ -0.35
CAPN1-212ENST00000527887 DSN1Q9H410 356 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms