RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.81□□□□□ -0.36
CPSF1-201ENST00000526271 UNC50Q53HI1 259 aa12.81□□□□□ -0.36
CPSF1-201ENST00000526271 C6orf163Q5TEZ5 329 aa12.81□□□□□ -0.36
CPSF1-201ENST00000526271 TTC19Q6DKK2 380 aaPredicted RBP12.81□□□□□ -0.36
CPSF1-201ENST00000526271 SLC44A2Q8IWA5 706 aaPredicted RBP12.81□□□□□ -0.36
CPSF1-201ENST00000526271 METTL25Q8N6Q8 603 aa12.81□□□□□ -0.36
CPSF1-201ENST00000526271 MAPK1IP1LQ8NDC0 245 aa12.81□□□□□ -0.36
CPSF1-201ENST00000526271 LILRB1Q8NHL6 650 aaPredicted RBP12.81□□□□□ -0.36
CPSF1-201ENST00000526271 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.81□□□□□ -0.36
CPSF1-201ENST00000526271 ADGRG7Q96K78 797 aa12.81□□□□□ -0.36
CPSF1-201ENST00000526271 BDH2Q9BUT1 245 aa12.81□□□□□ -0.36
CPSF1-201ENST00000526271 MCM8Q9UJA3 840 aa12.81□□□□□ -0.36
CPSF1-201ENST00000526271 PLCE1Q9P212 2302 aa12.8□□□□□ -0.36
CPSF1-201ENST00000526271 FAM171A2A8MVW0 826 aa12.8□□□□□ -0.36
CPSF1-201ENST00000526271 C16orf97H3BN30 126 aa12.8□□□□□ -0.36
CPSF1-201ENST00000526271 ABCB7O75027 752 aa12.8□□□□□ -0.36
CPSF1-201ENST00000526271 SHBGP04278 402 aa12.8□□□□□ -0.36
CPSF1-201ENST00000526271 PEPDP12955 493 aa12.8□□□□□ -0.36
CPSF1-201ENST00000526271 HK1P19367 917 aa12.8□□□□□ -0.36
CPSF1-201ENST00000526271 TRA2BP62995 288 aaKnown RBP12.8□□□□□ -0.36
CPSF1-201ENST00000526271 STX5Q13190 355 aa12.8□□□□□ -0.36
CPSF1-201ENST00000526271 CTU2Q2VPK5 515 aaKnown RBP12.8□□□□□ -0.36
CPSF1-201ENST00000526271 C10orf62Q5T681 223 aaPredicted RBP12.8□□□□□ -0.36
CPSF1-201ENST00000526271 STAC2Q6ZMT1 411 aa12.8□□□□□ -0.36
CPSF1-201ENST00000526271 C20orf204Q6ZNR8 217 aa12.8□□□□□ -0.36
CPSF1-201ENST00000526271 P4HA3Q7Z4N8 544 aa12.8□□□□□ -0.36
CPSF1-201ENST00000526271 ATG4DQ86TL0 474 aaPredicted RBP12.8□□□□□ -0.36
CPSF1-201ENST00000526271 CDYL2Q8N8U2 506 aa12.8□□□□□ -0.36
CPSF1-201ENST00000526271 C16orf78Q8WTQ4 265 aa12.8□□□□□ -0.36
CPSF1-201ENST00000526271 DCAKDQ8WVC6 231 aa12.8□□□□□ -0.36
CPSF1-201ENST00000526271 KCNA7Q96RP8 456 aa12.8□□□□□ -0.36
CPSF1-201ENST00000526271 PAFAH2Q99487 392 aa12.8□□□□□ -0.36
CPSF1-201ENST00000526271 ELOVL5Q9NYP7 299 aa12.8□□□□□ -0.36
CPSF1-201ENST00000526271 ZNF226Q9NYT6 803 aa12.8□□□□□ -0.36
CPSF1-201ENST00000526271 VPS29Q9UBQ0 182 aa12.8□□□□□ -0.36
CPSF1-201ENST00000526271 ZNF180Q9UJW8 692 aa12.8□□□□□ -0.36
CPSF1-201ENST00000526271 CLEC4AQ9UMR7 237 aa12.8□□□□□ -0.36
CPSF1-201ENST00000526271 UQCRHLA0A096LP55 91 aa12.79□□□□□ -0.36
CPSF1-201ENST00000526271 IGLV3-32A0A0A0MS00 114 aa12.79□□□□□ -0.36
CPSF1-201ENST00000526271 EXOC1LA0A1B0GW35 172 aa12.79□□□□□ -0.36
CPSF1-201ENST00000526271 MYO1GB0I1T2 1018 aa12.79□□□□□ -0.36
CPSF1-201ENST00000526271 POC1B-GALNT4F8VUJ3 575 aa12.79□□□□□ -0.36
CPSF1-201ENST00000526271 H3BML4 177 aa12.79□□□□□ -0.36
CPSF1-201ENST00000526271 CRLF1O75462 422 aa12.79□□□□□ -0.36
CPSF1-201ENST00000526271 RBP1P09455 135 aa12.79□□□□□ -0.36
CPSF1-201ENST00000526271 FPR1P21462 350 aa12.79□□□□□ -0.36
CPSF1-201ENST00000526271 PSMA4P25789 261 aaKnown RBP12.79□□□□□ -0.36
CPSF1-201ENST00000526271 GCKP35557 465 aa12.79□□□□□ -0.36
CPSF1-201ENST00000526271 EEF1A1P68104 462 aaKnown RBP12.79□□□□□ -0.36
CPSF1-201ENST00000526271 CLCQ05315 142 aa12.79□□□□□ -0.36
CPSF1-201ENST00000526271 TNK1Q13470 666 aa12.79□□□□□ -0.36
CPSF1-201ENST00000526271 EFR3AQ14156 821 aa12.79□□□□□ -0.36
CPSF1-201ENST00000526271 RASA2Q15283 850 aa12.79□□□□□ -0.36
CPSF1-201ENST00000526271 EEF1A1P5Q5VTE0 462 aa12.79□□□□□ -0.36
CPSF1-201ENST00000526271 RAET1LQ5VY80 246 aa12.79□□□□□ -0.36
CPSF1-201ENST00000526271 KLC3Q6P597 504 aa12.79□□□□□ -0.36
CPSF1-201ENST00000526271 SEZ6L2Q6UXD5 910 aa12.79□□□□□ -0.36
CPSF1-201ENST00000526271 MARCH3Q86UD3 253 aa12.79□□□□□ -0.36
CPSF1-201ENST00000526271 TDRPQ86YL5 185 aa12.79□□□□□ -0.36
CPSF1-201ENST00000526271 OR4K17Q8NGC6 315 aa12.79□□□□□ -0.36
CPSF1-201ENST00000526271 SPATA3Q8NHX4 192 aa12.79□□□□□ -0.36
CPSF1-201ENST00000526271 DUSP19Q8WTR2 217 aa12.79□□□□□ -0.36
CPSF1-201ENST00000526271 MTBPQ96DY7 904 aa12.79□□□□□ -0.36
CPSF1-201ENST00000526271 C1GALT1C1Q96EU7 318 aa12.79□□□□□ -0.36
CPSF1-201ENST00000526271 TMEM237Q96Q45 408 aa12.79□□□□□ -0.36
CPSF1-201ENST00000526271 EBPLQ9BY08 206 aa12.79□□□□□ -0.36
CPSF1-201ENST00000526271 PPCSQ9HAB8 311 aa12.79□□□□□ -0.36
CPSF1-201ENST00000526271 SLC35C2Q9NQQ7 365 aa12.79□□□□□ -0.36
CPSF1-201ENST00000526271 PPP4R1LQ9P1A2 415 aa12.79□□□□□ -0.36
CPSF1-201ENST00000526271 ZNF175Q9Y473 711 aa12.79□□□□□ -0.36
CPSF1-201ENST00000526271 ZNF780BQ9Y6R6 833 aa12.79□□□□□ -0.36
CPSF1-201ENST00000526271 GXYLT2A0PJZ3 443 aa12.78□□□□□ -0.36
CPSF1-201ENST00000526271 UPK1AO00322 258 aa12.78□□□□□ -0.36
CPSF1-201ENST00000526271 PCDH7O60245 1069 aa12.78□□□□□ -0.36
CPSF1-201ENST00000526271 DLX3O60479 287 aa12.78□□□□□ -0.36
CPSF1-201ENST00000526271 GUCY1B2O75343 617 aa12.78□□□□□ -0.36
CPSF1-201ENST00000526271 OTCP00480 354 aa12.78□□□□□ -0.36
CPSF1-201ENST00000526271 THBS1P07996 1170 aa12.78□□□□□ -0.36
CPSF1-201ENST00000526271 TBXA2RP21731 343 aa12.78□□□□□ -0.36
CPSF1-201ENST00000526271 IL12BP29460 328 aa12.78□□□□□ -0.36
CPSF1-201ENST00000526271 SERPINB9P50453 376 aa12.78□□□□□ -0.36
CPSF1-201ENST00000526271 FOXA1P55317 472 aa12.78□□□□□ -0.36
CPSF1-201ENST00000526271 OR2A2Q6IF42 318 aa12.78□□□□□ -0.36
CPSF1-201ENST00000526271 SCIMPQ6UWF3 145 aa12.78□□□□□ -0.36
CPSF1-201ENST00000526271 ZNF704Q6ZNC4 412 aaPredicted RBP12.78□□□□□ -0.36
CPSF1-201ENST00000526271 SH2D5Q6ZV89 423 aa12.78□□□□□ -0.36
CPSF1-201ENST00000526271 FAM214BQ7L5A3 538 aa12.78□□□□□ -0.36
CPSF1-201ENST00000526271 ZAR1Q86SH2 424 aa12.78□□□□□ -0.36
CPSF1-201ENST00000526271 GBP7Q8N8V2 638 aaPredicted RBP12.78□□□□□ -0.36
CPSF1-201ENST00000526271 RAB3IL1Q8TBN0 382 aa12.78□□□□□ -0.36
CPSF1-201ENST00000526271 NEUROG1Q92886 237 aa12.78□□□□□ -0.36
CPSF1-201ENST00000526271 ERP27Q96DN0 273 aa12.78□□□□□ -0.36
CPSF1-201ENST00000526271 TMEM109Q9BVC6 243 aa12.78□□□□□ -0.36
CPSF1-201ENST00000526271 FAIM2Q9BWQ8 316 aa12.78□□□□□ -0.36
CPSF1-201ENST00000526271 ROPN1BQ9BZX4 212 aaPredicted RBP12.78□□□□□ -0.36
CPSF1-201ENST00000526271 KLHL4Q9C0H6 718 aa12.78□□□□□ -0.36
CPSF1-201ENST00000526271 ROPN1Q9HAT0 212 aaPredicted RBP12.78□□□□□ -0.36
CPSF1-201ENST00000526271 PLSCR4Q9NRQ2 329 aa12.78□□□□□ -0.36
CPSF1-201ENST00000526271 ARGLU1Q9NWB6 273 aaPredicted RBP12.78□□□□□ -0.36
CPSF1-201ENST00000526271 TMEM216Q9P0N5 145 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms