RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 TRAM2Q15035 370 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 LRIF1Q5T3J3 769 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 LYPD4Q6UWN0 246 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 SLITRK4Q8IW52 837 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 FAM109AQ8N4B1 249 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 ARL14Q8N4G2 192 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 GDPD1Q8N9F7 314 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 ZG16BQ96DA0 208 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 C7orf34Q96L11 122 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 ZNF354BQ96LW1 612 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 HYLS1Q96M11 299 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 ADAD1Q96M93 576 aaKnown RBP6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 ZSWIM3Q96MP5 696 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 GAL3ST4Q96RP7 486 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 ZNF471Q9BX82 626 aaPredicted RBP6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 TREM1Q9NP99 234 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 TAS2R3Q9NYW6 316 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 MED31Q9Y3C7 131 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 POLR2AP24928 1970 aaKnown RBP6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 UBR3Q6ZT12 1888 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 ACOD1A6NK06 481 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 C1QTNF3-AMACRE9PGA6 284 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 H3BQ06 376 aaPredicted RBP6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 ARPC1BO15143 372 aaKnown RBP6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 POLR1CO15160 346 aaPredicted RBP6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 B4GALT2O60909 372 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 PPP1R3DO95685 299 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 SCG5P05408 212 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 HBQ1P09105 142 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 ITGB8P26012 769 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 DDX6P26196 483 aaKnown RBP eCLIP6.54□□□□□ -1.365e-8■■■■□ 23.4
TGFBR3-207ENST00000525962 ELAVL4P26378 380 aaKnown RBP6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 MLLT3P42568 568 aaPredicted RBP6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 MAGEB1P43366 347 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 KIAA1024LP59773 190 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 WDR5P61964 334 aaKnown RBP6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 ADAM8P78325 824 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 SNTA1Q13424 505 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 FXNQ16595 210 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 C18orf63Q68DL7 685 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 METAP1DQ6UB28 335 aaPredicted RBP6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 LRRN1Q6UXK5 716 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 NDUFAF7Q7L592 441 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 PRICKLE2Q7Z3G6 844 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 GALNT7Q86SF2 657 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 METTL3Q86U44 580 aaKnown RBP6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 NKAIN4Q8IVV8 208 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 ZNF615Q8N8J6 731 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 SDR9C7Q8NEX9 313 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 OR52E2Q8NGJ4 325 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 FANK1Q8TC84 345 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 IRF7Q92985 503 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 PDLIM5Q96HC4 596 aaKnown RBP6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 ZNF582Q96NG8 517 aaPredicted RBP6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 ALG8Q9BVK2 526 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 EXO5Q9H790 373 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 CENPMQ9NSP4 180 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 SOHLH2Q9NX45 425 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 ZSCAN32Q9NX65 697 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 MED11Q9P086 117 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 BRCA2P51587 3418 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 A0A0G2JPF8 293 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 TRBV2A0A0J9YWF9 115 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 A0A1B0GV50 99 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 HNRNPCL3B7ZW38 293 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 ZNF670-ZNF695F2Z2N8 137 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 LGALS8O00214 317 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 LDB3O75112 727 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 FURINP09958 794 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 HNRNPCL4P0DMR1 293 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 GSTM3P21266 225 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 ACTR1BP42025 376 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 WNT3P56703 355 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 ACTR1AP61163 376 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 EIF4HQ15056 248 aaKnown RBP6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 HLA-DQA1Q5Y7H0 255 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 TCTN3Q6NUS6 607 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 VITQ6UXI7 678 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 GAREM2Q75VX8 874 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 ZER1Q7Z7L7 766 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 JAZF1Q86VZ6 243 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 SLC44A3Q8N4M1 653 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 OR2T33Q8NG76 320 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 OR4M1Q8NGD0 313 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 OR8J2Q8NGG1 315 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 OR5P2Q8WZ92 322 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 ST8SIA2Q92186 375 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 RBM18Q96H35 190 aaKnown RBP6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 KATNB1Q9BVA0 655 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 BARHL1Q9BZE3 327 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 PLA2G12AQ9BZM1 189 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 TMEM185BQ9H7F4 350 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 ZMAT3Q9HA38 289 aaKnown RBP6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 ATP13A2Q9NQ11 1180 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 SLC23A1Q9UHI7 598 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 ATPIF1Q9UII2 106 aa6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 NOP16Q9Y3C1 178 aaKnown RBP6.54□□□□□ -1.36
TGFBR3-207ENST00000525962 OR2AT4A6NND4 320 aa6.53□□□□□ -1.36
TGFBR3-207ENST00000525962 LRRN3E7EW58 273 aa6.53□□□□□ -1.36
TGFBR3-207ENST00000525962 RNASET2O00584 256 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms