RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 GAB2Q9UQC2 676 aa12.99□□□□□ -0.33
LRRK1-202ENST00000525284 A0A1W2PRU2 124 aa12.99□□□□□ -0.33
LRRK1-202ENST00000525284 VSTM2BA6NLU5 285 aa12.99□□□□□ -0.33
LRRK1-202ENST00000525284 SORDQ00796 357 aa12.99□□□□□ -0.33
LRRK1-202ENST00000525284 SPATS1Q496A3 300 aa12.99□□□□□ -0.33
LRRK1-202ENST00000525284 TP53I3Q53FA7 332 aa12.99□□□□□ -0.33
LRRK1-202ENST00000525284 PLAC9Q5JTB6 97 aa12.99□□□□□ -0.33
LRRK1-202ENST00000525284 OGFOD3Q6PK18 319 aa12.99□□□□□ -0.33
LRRK1-202ENST00000525284 OR4N5Q8IXE1 308 aa12.99□□□□□ -0.33
LRRK1-202ENST00000525284 FAM213BQ8TBF2 198 aa12.99□□□□□ -0.33
LRRK1-202ENST00000525284 ZBED3Q96IU2 234 aaPredicted RBP12.99□□□□□ -0.33
LRRK1-202ENST00000525284 FAM103A1Q9BTL3 118 aaKnown RBP12.99□□□□□ -0.33
LRRK1-202ENST00000525284 SEMA6CQ9H3T2 930 aa12.99□□□□□ -0.33
LRRK1-202ENST00000525284 SLAMF7Q9NQ25 335 aa12.99□□□□□ -0.33
LRRK1-202ENST00000525284 UPK3BL1B0FP48 263 aa12.99□□□□□ -0.33
LRRK1-202ENST00000525284 UPK3BL2E5RIL1 263 aa12.99□□□□□ -0.33
LRRK1-202ENST00000525284 F5H5K5 113 aa12.99□□□□□ -0.33
LRRK1-202ENST00000525284 GPR137BO60478 399 aa12.99□□□□□ -0.33
LRRK1-202ENST00000525284 HLA-DMAP28067 261 aa12.99□□□□□ -0.33
LRRK1-202ENST00000525284 RBMXL3Q8N7X1 1067 aaKnown RBP12.99□□□□□ -0.33
LRRK1-202ENST00000525284 LHPPQ9H008 270 aa12.99□□□□□ -0.33
LRRK1-202ENST00000525284 OPA3Q9H6K4 179 aa12.99□□□□□ -0.33
LRRK1-202ENST00000525284 CPNE5Q9HCH3 593 aa12.99□□□□□ -0.33
LRRK1-202ENST00000525284 FBXL12Q9NXK8 326 aa12.99□□□□□ -0.33
LRRK1-202ENST00000525284 SALL4Q9UJQ4 1053 aa12.99□□□□□ -0.33
LRRK1-202ENST00000525284 LOC102723532A0A0G2JNH3 316 aa12.99□□□□□ -0.33
LRRK1-202ENST00000525284 CD79AP11912 226 aa12.99□□□□□ -0.33
LRRK1-202ENST00000525284 CA5AP35218 305 aa12.99□□□□□ -0.33
LRRK1-202ENST00000525284 CLDN6P56747 220 aa12.99□□□□□ -0.33
LRRK1-202ENST00000525284 NFATC3Q12968 1075 aa12.99□□□□□ -0.33
LRRK1-202ENST00000525284 METTL2BQ6P1Q9 378 aaKnown RBP12.99□□□□□ -0.33
LRRK1-202ENST00000525284 S100A7AQ86SG5 101 aa12.99□□□□□ -0.33
LRRK1-202ENST00000525284 OR2T27Q8NH04 317 aa12.99□□□□□ -0.33
LRRK1-202ENST00000525284 ZNF461Q8TAF7 563 aa12.99□□□□□ -0.33
LRRK1-202ENST00000525284 ZNF416Q9BWM5 594 aa12.99□□□□□ -0.33
LRRK1-202ENST00000525284 RBM24Q9BX46 236 aaKnown RBP12.99□□□□□ -0.33
LRRK1-202ENST00000525284 KCNK12Q9HB15 430 aa12.99□□□□□ -0.33
LRRK1-202ENST00000525284 RAB9BQ9NP90 201 aa12.99□□□□□ -0.33
LRRK1-202ENST00000525284 ADAMTS6Q9UKP5 1117 aa12.99□□□□□ -0.33
LRRK1-202ENST00000525284 MROH1Q8NDA8 1641 aa12.99□□□□□ -0.33
LRRK1-202ENST00000525284 A6NIN4 97 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 CBX7O95931 251 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 PTGER4P35408 488 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 EMP3P54852 163 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 SLC35F2Q8IXU6 374 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 NAT8LQ8N9F0 302 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 LRRC57Q8N9N7 239 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 OR5P2Q8WZ92 322 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 TBC1D20Q96BZ9 403 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 DERL2Q9GZP9 239 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 PDZD7Q9H5P4 517 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 NIT2Q9NQR4 276 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 VSX1Q9NZR4 365 aaPredicted RBP12.98□□□□□ -0.33
LRRK1-202ENST00000525284 FAM155AB1AL88 458 aaPredicted RBP12.98□□□□□ -0.33
LRRK1-202ENST00000525284 XRCC3O43542 346 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 DNAJB6O75190 326 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 DIO3P55073 304 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 SLC9A3R2Q15599 337 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 TAF9Q16594 264 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 LTC4SQ16873 150 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 EXOSC6Q5RKV6 272 aaKnown RBP12.98□□□□□ -0.33
LRRK1-202ENST00000525284 IL34Q6ZMJ4 242 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 MRPL21Q7Z2W9 205 aaKnown RBP12.98□□□□□ -0.33
LRRK1-202ENST00000525284 OR2T4Q8NH00 348 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 OR56B4Q8NH76 319 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 WFIKKN2Q8TEU8 576 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 RNF170Q96K19 258 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 MSTNO14793 375 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 PPP1R2P9O14990 202 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 PRAF2O60831 178 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 PPP1R3DO95685 299 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 TIMP2P16035 220 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 SELPP16109 830 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 ETV4P43268 484 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 BAXQ07812 192 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 DGKZQ13574 1117 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 ZNF678Q5SXM1 525 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 SHEQ5VZ18 495 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 KBTBD6Q86V97 674 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 TEPSINQ96N21 525 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 FGFBP2Q9BYJ0 223 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 NOX3Q9HBY0 568 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 PCDHB10Q9UN67 800 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 GGT1P19440 569 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 RAB3AP20336 220 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 TGM1P22735 817 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 OPRL1P41146 370 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 HOXA1P49639 335 aaPredicted RBP12.98□□□□□ -0.33
LRRK1-202ENST00000525284 FXNQ16595 210 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 SPARTQ8N0X7 666 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 PLPP5Q8NEB5 264 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 ZNF596Q8TC21 504 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 SPTSSAQ969W0 71 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 FBXL18Q96ME1 805 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 INTS14Q96SY0 518 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 AIG1Q9NVV5 245 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 TMEM88BA6NKF7 163 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 NME2P22392 152 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 KDELR2P33947 212 aa12.98□□□□□ -0.33
LRRK1-202ENST00000525284 CTXN1P60606 82 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms