RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 PTGES2Q9H7Z7 377 aa21.54■■□□□ 1.04
USP47-205ENST00000525257 ABCG2Q9UNQ0 655 aa21.54■■□□□ 1.04
USP47-205ENST00000525257 CNOT4O95628 575 aaKnown RBP21.53■■□□□ 1.04
USP47-205ENST00000525257 JUNP05412 331 aaKnown RBP21.53■■□□□ 1.04
USP47-205ENST00000525257 RPS3AP61247 264 aaKnown RBP21.53■■□□□ 1.04
USP47-205ENST00000525257 BTKQ06187 659 aa21.53■■□□□ 1.04
USP47-205ENST00000525257 GUSBP1Q15486 140 aa21.53■■□□□ 1.04
USP47-205ENST00000525257 PPP4R4Q6NUP7 873 aa21.53■■□□□ 1.04
USP47-205ENST00000525257 PLEKHM3Q6ZWE6 761 aa21.53■■□□□ 1.04
USP47-205ENST00000525257 ZNF572Q7Z3I7 529 aaPredicted RBP21.53■■□□□ 1.04
USP47-205ENST00000525257 CDC26Q8NHZ8 85 aa21.53■■□□□ 1.04
USP47-205ENST00000525257 C1GALT1C1Q96EU7 318 aa21.53■■□□□ 1.04
USP47-205ENST00000525257 ZNF382Q96SR6 550 aa21.53■■□□□ 1.04
USP47-205ENST00000525257 DMGDHQ9UI17 866 aaKnown RBP21.53■■□□□ 1.04
USP47-205ENST00000525257 COL6A5A8TX70 2615 aa21.53■■□□□ 1.04
USP47-205ENST00000525257 UQCRHLA0A096LP55 91 aa21.52■■□□□ 1.04
USP47-205ENST00000525257 LINC01387J3KSC0 135 aa21.52■■□□□ 1.04
USP47-205ENST00000525257 GMFGO60234 142 aa21.52■■□□□ 1.04
USP47-205ENST00000525257 AQP8O94778 261 aa21.52■■□□□ 1.04
USP47-205ENST00000525257 THBDP07204 575 aa21.52■■□□□ 1.04
USP47-205ENST00000525257 RFX3P48380 749 aa21.52■■□□□ 1.04
USP47-205ENST00000525257 NCBP2P52298 156 aaKnown RBP eCLIP21.52■■□□□ 1.04
USP47-205ENST00000525257 SGCBQ16585 318 aa21.52■■□□□ 1.04
USP47-205ENST00000525257 PRSS53Q2L4Q9 553 aa21.52■■□□□ 1.04
USP47-205ENST00000525257 CYP27C1Q4G0S4 372 aa21.52■■□□□ 1.04
USP47-205ENST00000525257 ZNF678Q5SXM1 525 aa21.52■■□□□ 1.04
USP47-205ENST00000525257 TMEM107Q6UX40 140 aa21.52■■□□□ 1.04
USP47-205ENST00000525257 SYT10Q6XYQ8 523 aa21.52■■□□□ 1.04
USP47-205ENST00000525257 FAM214BQ7L5A3 538 aa21.52■■□□□ 1.04
USP47-205ENST00000525257 MARCH3Q86UD3 253 aa21.52■■□□□ 1.04
USP47-205ENST00000525257 METTL25Q8N6Q8 603 aa21.52■■□□□ 1.04
USP47-205ENST00000525257 DUSP19Q8WTR2 217 aa21.52■■□□□ 1.04
USP47-205ENST00000525257 DCAKDQ8WVC6 231 aa21.52■■□□□ 1.04
USP47-205ENST00000525257 CAVIN3Q969G5 261 aa21.52■■□□□ 1.04
USP47-205ENST00000525257 GFM2Q969S9 779 aaKnown RBP21.52■■□□□ 1.04
USP47-205ENST00000525257 TMEM237Q96Q45 408 aa21.52■■□□□ 1.04
USP47-205ENST00000525257 FAM120CQ9NX05 1096 aaKnown RBP21.52■■□□□ 1.04
USP47-205ENST00000525257 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP21.51■■□□□ 1.03
USP47-205ENST00000525257 MYO1GB0I1T2 1018 aa21.51■■□□□ 1.03
USP47-205ENST00000525257 SHISA8B8ZZ34 492 aa21.51■■□□□ 1.03
USP47-205ENST00000525257 ANXA4P09525 319 aaPredicted RBP21.51■■□□□ 1.03
USP47-205ENST00000525257 TAC1P20366 129 aa21.51■■□□□ 1.03
USP47-205ENST00000525257 DECR1Q16698 335 aa21.51■■□□□ 1.03
USP47-205ENST00000525257 LGSNQ5TDP6 509 aa21.51■■□□□ 1.03
USP47-205ENST00000525257 RELL1Q8IUW5 271 aa21.51■■□□□ 1.03
USP47-205ENST00000525257 CLEC4AQ9UMR7 237 aa21.51■■□□□ 1.03
USP47-205ENST00000525257 NFU1Q9UMS0 254 aa21.51■■□□□ 1.03
USP47-205ENST00000525257 ATRQ13535 2644 aa21.51■■□□□ 1.03
USP47-205ENST00000525257 USF3Q68DE3 2245 aa21.5■■□□□ 1.03
USP47-205ENST00000525257 A0A087WV62 115 aa21.5■■□□□ 1.03
USP47-205ENST00000525257 FCGR2AP12318 317 aa21.5■■□□□ 1.03
USP47-205ENST00000525257 DDCP20711 480 aa21.5■■□□□ 1.03
USP47-205ENST00000525257 CLK3P49761 638 aaKnown RBP21.5■■□□□ 1.03
USP47-205ENST00000525257 C2orf80Q0P641 193 aa21.5■■□□□ 1.03
USP47-205ENST00000525257 BEX5Q5H9J7 111 aa21.5■■□□□ 1.03
USP47-205ENST00000525257 GALNT18Q6P9A2 607 aa21.5■■□□□ 1.03
USP47-205ENST00000525257 ZNF704Q6ZNC4 412 aaPredicted RBP21.5■■□□□ 1.03
USP47-205ENST00000525257 C17orf53Q8N3J3 647 aaPredicted RBP21.5■■□□□ 1.03
USP47-205ENST00000525257 TMEM171Q8WVE6 324 aa21.5■■□□□ 1.03
USP47-205ENST00000525257 IGFBPL1Q8WX77 278 aa21.5■■□□□ 1.03
USP47-205ENST00000525257 KCNA7Q96RP8 456 aa21.5■■□□□ 1.03
USP47-205ENST00000525257 PRRG4Q9BZD6 226 aa21.5■■□□□ 1.03
USP47-205ENST00000525257 Q9N2J8 555 aa21.5■■□□□ 1.03
USP47-205ENST00000525257 ZNF180Q9UJW8 692 aa21.5■■□□□ 1.03
USP47-205ENST00000525257 C19orf53Q9UNZ5 99 aaPredicted RBP21.5■■□□□ 1.03
USP47-205ENST00000525257 TIMM22Q9Y584 194 aa21.5■■□□□ 1.03
USP47-205ENST00000525257 AP4B1Q9Y6B7 739 aa21.5■■□□□ 1.03
USP47-205ENST00000525257 FBN1P35555 2871 aaKnown RBP21.49■■□□□ 1.03
USP47-205ENST00000525257 EIF1AYO14602 144 aaKnown RBP21.49■■□□□ 1.03
USP47-205ENST00000525257 KLF4O43474 513 aa21.49■■□□□ 1.03
USP47-205ENST00000525257 DLX3O60479 287 aa21.49■■□□□ 1.03
USP47-205ENST00000525257 IL33O95760 270 aa21.49■■□□□ 1.03
USP47-205ENST00000525257 EIF1AXP47813 144 aaKnown RBP21.49■■□□□ 1.03
USP47-205ENST00000525257 SLC6A8P48029 635 aa21.49■■□□□ 1.03
USP47-205ENST00000525257 GGNQ86UU5 652 aa21.49■■□□□ 1.03
USP47-205ENST00000525257 C11orf24Q96F05 449 aaPredicted RBP21.49■■□□□ 1.03
USP47-205ENST00000525257 SHCBP1LQ9BZQ2 653 aa21.49■■□□□ 1.03
USP47-205ENST00000525257 DDX18Q9NVP1 670 aaKnown RBP21.49■■□□□ 1.03
USP47-205ENST00000525257 TMEM216Q9P0N5 145 aa21.49■■□□□ 1.03
USP47-205ENST00000525257 ADAM21Q9UKJ8 722 aa21.49■■□□□ 1.03
USP47-205ENST00000525257 EMC9Q9Y3B6 208 aa21.49■■□□□ 1.03
USP47-205ENST00000525257 ANK3Q12955 4377 aaKnown RBP21.49■■□□□ 1.03
USP47-205ENST00000525257 UPK1AO00322 258 aa21.48■■□□□ 1.03
USP47-205ENST00000525257 PLGP00747 810 aaPredicted RBP21.48■■□□□ 1.03
USP47-205ENST00000525257 PLAUP00749 431 aa21.48■■□□□ 1.03
USP47-205ENST00000525257 SNRPAP09012 282 aaKnown RBP21.48■■□□□ 1.03
USP47-205ENST00000525257 ETF1P62495 437 aaKnown RBP21.48■■□□□ 1.03
USP47-205ENST00000525257 OCRLQ01968 901 aa21.48■■□□□ 1.03
USP47-205ENST00000525257 ZNF763Q0D2J5 394 aa21.48■■□□□ 1.03
USP47-205ENST00000525257 ZNHIT3Q15649 155 aaPredicted RBP21.48■■□□□ 1.03
USP47-205ENST00000525257 GLYR1Q49A26 553 aaPredicted RBP21.48■■□□□ 1.03
USP47-205ENST00000525257 SPDYAQ5MJ70 313 aa21.48■■□□□ 1.03
USP47-205ENST00000525257 OR6K3Q8NGY3 331 aa21.48■■□□□ 1.03
USP47-205ENST00000525257 TBL1XR1Q9BZK7 514 aa21.48■■□□□ 1.03
USP47-205ENST00000525257 GLIPR2Q9H4G4 154 aa21.48■■□□□ 1.03
USP47-205ENST00000525257 MIEF1Q9NQG6 463 aa21.48■■□□□ 1.03
USP47-205ENST00000525257 MRTO4Q9UKD2 239 aaKnown RBP21.48■■□□□ 1.03
USP47-205ENST00000525257 VDAC3Q9Y277 283 aa21.48■■□□□ 1.03
USP47-205ENST00000525257 UTS2O95399 124 aa21.47■■□□□ 1.03
USP47-205ENST00000525257 PSMG1O95456 288 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms