RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 OR4F21O95013 312 aa20.37■□□□□ 0.85
PVT1-218ENST00000523328 HSD3B1P14060 373 aa20.37■□□□□ 0.85
PVT1-218ENST00000523328 CHN1P15882 459 aa20.37■□□□□ 0.85
PVT1-218ENST00000523328 HSD3B2P26439 372 aa20.37■□□□□ 0.85
PVT1-218ENST00000523328 DMTNQ08495 405 aa20.37■□□□□ 0.85
PVT1-218ENST00000523328 SGCBQ16585 318 aa20.37■□□□□ 0.85
PVT1-218ENST00000523328 TMEM44Q2T9K0 475 aa20.37■□□□□ 0.85
PVT1-218ENST00000523328 GLYR1Q49A26 553 aaPredicted RBP20.37■□□□□ 0.85
PVT1-218ENST00000523328 FAM9CQ8IZT9 166 aa20.37■□□□□ 0.85
PVT1-218ENST00000523328 DUSP19Q8WTR2 217 aa20.37■□□□□ 0.85
PVT1-218ENST00000523328 C1QTNF3Q9BXJ4 246 aa20.37■□□□□ 0.85
PVT1-218ENST00000523328 EMC9Q9Y3B6 208 aa20.37■□□□□ 0.85
PVT1-218ENST00000523328 RNF223E7ERA6 249 aa20.36■□□□□ 0.85
PVT1-218ENST00000523328 MANBAO00462 879 aa20.36■□□□□ 0.85
PVT1-218ENST00000523328 PCDH7O60245 1069 aa20.36■□□□□ 0.85
PVT1-218ENST00000523328 SBK3P0C264 359 aa20.36■□□□□ 0.85
PVT1-218ENST00000523328 IL11P20809 199 aa20.36■□□□□ 0.85
PVT1-218ENST00000523328 ZNF155Q12901 538 aaPredicted RBP20.36■□□□□ 0.85
PVT1-218ENST00000523328 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.36■□□□□ 0.85
PVT1-218ENST00000523328 CLEC12BQ2HXU8 276 aa20.36■□□□□ 0.85
PVT1-218ENST00000523328 CYP27C1Q4G0S4 372 aa20.36■□□□□ 0.85
PVT1-218ENST00000523328 SH2D4BQ5SQS7 431 aa20.36■□□□□ 0.85
PVT1-218ENST00000523328 UBAP2Q5T6F2 1119 aaKnown RBP20.36■□□□□ 0.85
PVT1-218ENST00000523328 GMPPAQ96IJ6 420 aaPredicted RBP20.36■□□□□ 0.85
PVT1-218ENST00000523328 GIMAP4Q9NUV9 329 aa20.36■□□□□ 0.85
PVT1-218ENST00000523328 FAM120CQ9NX05 1096 aaKnown RBP20.36■□□□□ 0.85
PVT1-218ENST00000523328 SENP1Q9P0U3 644 aa20.36■□□□□ 0.85
PVT1-218ENST00000523328 CLEC4AQ9UMR7 237 aa20.36■□□□□ 0.85
PVT1-218ENST00000523328 LAMP3Q9UQV4 416 aa20.36■□□□□ 0.85
PVT1-218ENST00000523328 SHISA8B8ZZ34 492 aa20.35■□□□□ 0.85
PVT1-218ENST00000523328 MPIP34949 423 aa20.35■□□□□ 0.85
PVT1-218ENST00000523328 CSTF3Q12996 717 aaKnown RBP20.35■□□□□ 0.85
PVT1-218ENST00000523328 VEZF1Q14119 521 aa20.35■□□□□ 0.85
PVT1-218ENST00000523328 TSNAXIP1Q2TAA8 658 aa20.35■□□□□ 0.85
PVT1-218ENST00000523328 MARCH3Q86UD3 253 aa20.35■□□□□ 0.85
PVT1-218ENST00000523328 WFDC8Q8IUA0 241 aa20.35■□□□□ 0.85
PVT1-218ENST00000523328 TMEM151AQ8N4L1 468 aa20.35■□□□□ 0.85
PVT1-218ENST00000523328 C16orf78Q8WTQ4 265 aa20.35■□□□□ 0.85
PVT1-218ENST00000523328 AKAP1Q92667 903 aaKnown RBP eCLIP20.35■□□□□ 0.85
PVT1-218ENST00000523328 ACTR6Q9GZN1 396 aa20.35■□□□□ 0.85
PVT1-218ENST00000523328 RAB17Q9H0T7 212 aa20.35■□□□□ 0.85
PVT1-218ENST00000523328 ACSS3Q9H6R3 686 aa20.35■□□□□ 0.85
PVT1-218ENST00000523328 A0A087WV62 115 aa20.34■□□□□ 0.85
PVT1-218ENST00000523328 IGLV3-32A0A0A0MS00 114 aa20.34■□□□□ 0.85
PVT1-218ENST00000523328 GNG14A0A1W2PPG7 69 aa20.34■□□□□ 0.85
PVT1-218ENST00000523328 A8MT66 165 aa20.34■□□□□ 0.85
PVT1-218ENST00000523328 RNF212BA8MTL3 300 aa20.34■□□□□ 0.85
PVT1-218ENST00000523328 OVOL3O00110 214 aa20.34■□□□□ 0.85
PVT1-218ENST00000523328 SS18L1O75177 396 aaPredicted RBP20.34■□□□□ 0.85
PVT1-218ENST00000523328 COQ9O75208 318 aa20.34■□□□□ 0.85
PVT1-218ENST00000523328 HSD17B3P37058 310 aa20.34■□□□□ 0.85
PVT1-218ENST00000523328 EIF1AXP47813 144 aaKnown RBP20.34■□□□□ 0.85
PVT1-218ENST00000523328 RPS4XP62701 263 aaKnown RBP20.34■□□□□ 0.85
PVT1-218ENST00000523328 HEPACAMQ14CZ8 416 aa20.34■□□□□ 0.85
PVT1-218ENST00000523328 PRSS53Q2L4Q9 553 aa20.34■□□□□ 0.85
PVT1-218ENST00000523328 HMBOX1Q6NT76 420 aa20.34■□□□□ 0.85
PVT1-218ENST00000523328 PHC2Q8IXK0 858 aa20.34■□□□□ 0.85
PVT1-218ENST00000523328 CDYL2Q8N8U2 506 aa20.34■□□□□ 0.85
PVT1-218ENST00000523328 C11orf24Q96F05 449 aaPredicted RBP20.34■□□□□ 0.85
PVT1-218ENST00000523328 MRPL57Q9BQC6 102 aaKnown RBP20.34■□□□□ 0.85
PVT1-218ENST00000523328 ACPTQ9BZG2 426 aa20.34■□□□□ 0.85
PVT1-218ENST00000523328 OR10A4Q9H209 315 aa20.34■□□□□ 0.85
PVT1-218ENST00000523328 MRPL46Q9H2W6 279 aaKnown RBP20.34■□□□□ 0.85
PVT1-218ENST00000523328 EIF1AYO14602 144 aaKnown RBP20.33■□□□□ 0.85
PVT1-218ENST00000523328 PSMG1O95456 288 aa20.33■□□□□ 0.85
PVT1-218ENST00000523328 IL33O95760 270 aa20.33■□□□□ 0.85
PVT1-218ENST00000523328 CTBP2P56545 445 aa20.33■□□□□ 0.85
PVT1-218ENST00000523328 ZNF844Q08AG5 666 aa20.33■□□□□ 0.85
PVT1-218ENST00000523328 DECR1Q16698 335 aa20.33■□□□□ 0.85
PVT1-218ENST00000523328 LGSNQ5TDP6 509 aa20.33■□□□□ 0.85
PVT1-218ENST00000523328 PPP4R4Q6NUP7 873 aa20.33■□□□□ 0.85
PVT1-218ENST00000523328 ADAM5Q6NVV9 412 aa20.33■□□□□ 0.85
PVT1-218ENST00000523328 BEND4Q6ZU67 534 aa20.33■□□□□ 0.85
PVT1-218ENST00000523328 LILRB1Q8NHL6 650 aaPredicted RBP20.33■□□□□ 0.85
PVT1-218ENST00000523328 RAB3IL1Q8TBN0 382 aa20.33■□□□□ 0.85
PVT1-218ENST00000523328 APIPQ96GX9 242 aa20.33■□□□□ 0.85
PVT1-218ENST00000523328 ADGRG7Q96K78 797 aa20.33■□□□□ 0.85
PVT1-218ENST00000523328 REG4Q9BYZ8 158 aa20.33■□□□□ 0.85
PVT1-218ENST00000523328 PRRG4Q9BZD6 226 aa20.33■□□□□ 0.85
PVT1-218ENST00000523328 C19orf53Q9UNZ5 99 aaPredicted RBP20.33■□□□□ 0.85
PVT1-218ENST00000523328 FREM1Q5H8C1 2179 aa20.33■□□□□ 0.85
PVT1-218ENST00000523328 UQCRHLA0A096LP55 91 aa20.32■□□□□ 0.84
PVT1-218ENST00000523328 MYO1GB0I1T2 1018 aa20.32■□□□□ 0.84
PVT1-218ENST00000523328 PLGP00747 810 aaPredicted RBP20.32■□□□□ 0.84
PVT1-218ENST00000523328 KRT6AP02538 564 aa20.32■□□□□ 0.84
PVT1-218ENST00000523328 KRT6BP04259 564 aa20.32■□□□□ 0.84
PVT1-218ENST00000523328 COL6A2P12110 1019 aa20.32■□□□□ 0.84
PVT1-218ENST00000523328 PSMB1P20618 241 aaKnown RBP20.32■□□□□ 0.84
PVT1-218ENST00000523328 TIA1P31483 386 aaKnown RBP eCLIP20.32■□□□□ 0.84
PVT1-218ENST00000523328 KRT6CP48668 564 aa20.32■□□□□ 0.84
PVT1-218ENST00000523328 CLCQ05315 142 aa20.32■□□□□ 0.84
PVT1-218ENST00000523328 ETFDHQ16134 617 aa20.32■□□□□ 0.84
PVT1-218ENST00000523328 CTU2Q2VPK5 515 aaKnown RBP20.32■□□□□ 0.84
PVT1-218ENST00000523328 SPIN4Q56A73 249 aa20.32■□□□□ 0.84
PVT1-218ENST00000523328 APOOLQ6UXV4 268 aa20.32■□□□□ 0.84
PVT1-218ENST00000523328 OR10D3Q8NH80 312 aa20.32■□□□□ 0.84
PVT1-218ENST00000523328 BBS4Q96RK4 519 aa20.32■□□□□ 0.84
PVT1-218ENST00000523328 SHCBP1LQ9BZQ2 653 aa20.32■□□□□ 0.84
PVT1-218ENST00000523328 DMGDHQ9UI17 866 aaKnown RBP20.32■□□□□ 0.84
PVT1-218ENST00000523328 GPR52Q9Y2T5 361 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms