RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 FLRT3Q9NZU0 649 aa14.72□□□□□ -0.05
CLN8-206ENST00000523237 NTMQ9P121 344 aa14.72□□□□□ -0.05
CLN8-206ENST00000523237 FOXD3Q9UJU5 478 aaPredicted RBP14.72□□□□□ -0.05
CLN8-206ENST00000523237 RPH3AQ9Y2J0 694 aaPredicted RBP14.72□□□□□ -0.05
CLN8-206ENST00000523237 CSMD1Q96PZ7 3565 aa14.71□□□□□ -0.05
CLN8-206ENST00000523237 GXYLT2A0PJZ3 443 aa14.71□□□□□ -0.05
CLN8-206ENST00000523237 B4DXG7 233 aa14.71□□□□□ -0.05
CLN8-206ENST00000523237 SCAMP2O15127 329 aaKnown RBP14.71□□□□□ -0.05
CLN8-206ENST00000523237 RGS16O15492 202 aaPredicted RBP14.71□□□□□ -0.05
CLN8-206ENST00000523237 CTIFO43310 598 aaKnown RBP14.71□□□□□ -0.05
CLN8-206ENST00000523237 EMC8O43402 210 aa14.71□□□□□ -0.05
CLN8-206ENST00000523237 SKAP2O75563 359 aaPredicted RBP14.71□□□□□ -0.05
CLN8-206ENST00000523237 NKX2-2O95096 273 aa14.71□□□□□ -0.05
CLN8-206ENST00000523237 ZWINTO95229 277 aa14.71□□□□□ -0.05
CLN8-206ENST00000523237 UTS2O95399 124 aa14.71□□□□□ -0.05
CLN8-206ENST00000523237 TMIGD3P0DMS9 266 aaPredicted RBP14.71□□□□□ -0.05
CLN8-206ENST00000523237 TCEA1P23193 301 aaKnown RBP14.71□□□□□ -0.05
CLN8-206ENST00000523237 ARRB2P32121 409 aa14.71□□□□□ -0.05
CLN8-206ENST00000523237 MAP3K8P41279 467 aa14.71□□□□□ -0.05
CLN8-206ENST00000523237 ZNF844Q08AG5 666 aa14.71□□□□□ -0.05
CLN8-206ENST00000523237 STX5Q13190 355 aa14.71□□□□□ -0.05
CLN8-206ENST00000523237 FBXL19-AS1Q494R0 122 aa14.71□□□□□ -0.05
CLN8-206ENST00000523237 POMZP3Q6PJE2 187 aa14.71□□□□□ -0.05
CLN8-206ENST00000523237 ADGRE4PQ86SQ3 457 aa14.71□□□□□ -0.05
CLN8-206ENST00000523237 CDH24Q86UP0 819 aa14.71□□□□□ -0.05
CLN8-206ENST00000523237 NUDCD3Q8IVD9 361 aa14.71□□□□□ -0.05
CLN8-206ENST00000523237 C9orf106Q8NAJ2 232 aa14.71□□□□□ -0.05
CLN8-206ENST00000523237 OR2M3Q8NG83 312 aa14.71□□□□□ -0.05
CLN8-206ENST00000523237 OR6Y1Q8NGX8 325 aa14.71□□□□□ -0.05
CLN8-206ENST00000523237 PIK3R3Q92569 461 aa14.71□□□□□ -0.05
CLN8-206ENST00000523237 SLC9A6Q92581 669 aa14.71□□□□□ -0.05
CLN8-206ENST00000523237 RNASE6Q93091 150 aaKnown RBP14.71□□□□□ -0.05
CLN8-206ENST00000523237 ZFP3Q96NJ6 502 aa14.71□□□□□ -0.05
CLN8-206ENST00000523237 UCN2Q96RP3 112 aa14.71□□□□□ -0.05
CLN8-206ENST00000523237 TM9SF2Q99805 663 aa14.71□□□□□ -0.05
CLN8-206ENST00000523237 GIMAP2Q9UG22 337 aa14.71□□□□□ -0.05
CLN8-206ENST00000523237 ATP6V1HQ9UI12 483 aa14.71□□□□□ -0.05
CLN8-206ENST00000523237 ZDHHC2Q9UIJ5 367 aa14.71□□□□□ -0.05
CLN8-206ENST00000523237 PCNX3Q9H6A9 2034 aa14.71□□□□□ -0.05
CLN8-206ENST00000523237 ANKRD17O75179 2603 aaKnown RBP14.71□□□□□ -0.06
CLN8-206ENST00000523237 CSMD2Q7Z408 3487 aa14.7□□□□□ -0.06
CLN8-206ENST00000523237 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.7□□□□□ -0.06
CLN8-206ENST00000523237 CLCA1A8K7I4 914 aa14.7□□□□□ -0.06
CLN8-206ENST00000523237 C17orf51A8MQB3 221 aa14.7□□□□□ -0.06
CLN8-206ENST00000523237 IL18BPO95998 194 aa14.7□□□□□ -0.06
CLN8-206ENST00000523237 ZNF708P17019 499 aa14.7□□□□□ -0.06
CLN8-206ENST00000523237 HK1P19367 917 aa14.7□□□□□ -0.06
CLN8-206ENST00000523237 KIR2DL3P43628 341 aa14.7□□□□□ -0.06
CLN8-206ENST00000523237 SERPINB4P48594 390 aa14.7□□□□□ -0.06
CLN8-206ENST00000523237 CLDN18P56856 261 aa14.7□□□□□ -0.06
CLN8-206ENST00000523237 PRR5P85299 388 aa14.7□□□□□ -0.06
CLN8-206ENST00000523237 C17orf67Q0P5P2 114 aa14.7□□□□□ -0.06
CLN8-206ENST00000523237 MLC1Q15049 377 aa14.7□□□□□ -0.06
CLN8-206ENST00000523237 BCL2A1Q16548 175 aa14.7□□□□□ -0.06
CLN8-206ENST00000523237 C6orf136Q5SQH8 315 aa14.7□□□□□ -0.06
CLN8-206ENST00000523237 ZCCHC12Q6PEW1 402 aa14.7□□□□□ -0.06
CLN8-206ENST00000523237 MARCH3Q86UD3 253 aa14.7□□□□□ -0.06
CLN8-206ENST00000523237 FNDC5Q8NAU1 212 aa14.7□□□□□ -0.06
CLN8-206ENST00000523237 OR7A2PQ8NGA2 310 aa14.7□□□□□ -0.06
CLN8-206ENST00000523237 WNT2BQ93097 391 aa14.7□□□□□ -0.06
CLN8-206ENST00000523237 TUBGCP3Q96CW5 907 aa14.7□□□□□ -0.06
CLN8-206ENST00000523237 GIMAP5Q96F15 307 aa14.7□□□□□ -0.06
CLN8-206ENST00000523237 C3orf30Q96M34 536 aa14.7□□□□□ -0.06
CLN8-206ENST00000523237 C1orf50Q9BV19 199 aa14.7□□□□□ -0.06
CLN8-206ENST00000523237 RTN4RQ9BZR6 473 aa14.7□□□□□ -0.06
CLN8-206ENST00000523237 ACBD3Q9H3P7 528 aa14.7□□□□□ -0.06
CLN8-206ENST00000523237 HHATLQ9HCP6 504 aa14.7□□□□□ -0.06
CLN8-206ENST00000523237 SSU72Q9NP77 194 aaKnown RBP14.7□□□□□ -0.06
CLN8-206ENST00000523237 ATAD3AQ9NVI7 634 aa14.7□□□□□ -0.06
CLN8-206ENST00000523237 MED11Q9P086 117 aa14.7□□□□□ -0.06
CLN8-206ENST00000523237 ITGB1BP2Q9UKP3 347 aa14.7□□□□□ -0.06
CLN8-206ENST00000523237 MED12LQ86YW9 2145 aa14.69□□□□□ -0.06
CLN8-206ENST00000523237 A0A1W2PRB8 838 aa14.69□□□□□ -0.06
CLN8-206ENST00000523237 EEF1E1-BLOC1S5C9J1V9 151 aa14.69□□□□□ -0.06
CLN8-206ENST00000523237 EEF1E1O43324 174 aaKnown RBP14.69□□□□□ -0.06
CLN8-206ENST00000523237 LYPLA1O75608 230 aaPredicted RBP14.69□□□□□ -0.06
CLN8-206ENST00000523237 RCBTB2O95199 551 aa14.69□□□□□ -0.06
CLN8-206ENST00000523237 HSPA4LO95757 839 aa14.69□□□□□ -0.06
CLN8-206ENST00000523237 ANGPTL1O95841 491 aa14.69□□□□□ -0.06
CLN8-206ENST00000523237 IGKV1D-16P01601 117 aa14.69□□□□□ -0.06
CLN8-206ENST00000523237 ACP2P11117 423 aa14.69□□□□□ -0.06
CLN8-206ENST00000523237 PEPDP12955 493 aa14.69□□□□□ -0.06
CLN8-206ENST00000523237 EFNA1P20827 205 aaPredicted RBP14.69□□□□□ -0.06
CLN8-206ENST00000523237 AGFG1P52594 562 aaKnown RBP14.69□□□□□ -0.06
CLN8-206ENST00000523237 B3GALT5-AS1P59052 145 aa14.69□□□□□ -0.06
CLN8-206ENST00000523237 SNTB1Q13884 538 aaKnown RBP14.69□□□□□ -0.06
CLN8-206ENST00000523237 PTGR1Q14914 329 aa14.69□□□□□ -0.06
CLN8-206ENST00000523237 GRAMD1BQ3KR37 738 aa14.69□□□□□ -0.06
CLN8-206ENST00000523237 IL23RQ5VWK5 629 aa14.69□□□□□ -0.06
CLN8-206ENST00000523237 RAET1LQ5VY80 246 aa14.69□□□□□ -0.06
CLN8-206ENST00000523237 MFSD12Q6NUT3 480 aa14.69□□□□□ -0.06
CLN8-206ENST00000523237 CHMP1BQ7LBR1 199 aa14.69□□□□□ -0.06
CLN8-206ENST00000523237 EXOC3L1Q86VI1 746 aa14.69□□□□□ -0.06
CLN8-206ENST00000523237 GRAMD2AQ8IUY3 354 aa14.69□□□□□ -0.06
CLN8-206ENST00000523237 ZZZ3Q8IYH5 903 aa14.69□□□□□ -0.06
CLN8-206ENST00000523237 NATD1Q8N6N6 113 aa14.69□□□□□ -0.06
CLN8-206ENST00000523237 SLC16A11Q8NCK7 471 aa14.69□□□□□ -0.06
CLN8-206ENST00000523237 GOT1L1Q8NHS2 421 aaPredicted RBP14.69□□□□□ -0.06
CLN8-206ENST00000523237 DUSP19Q8WTR2 217 aa14.69□□□□□ -0.06
CLN8-206ENST00000523237 C1GALT1C1Q96EU7 318 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms