RNA–Protein interactions for RNA: ENST00000523055.5

PCM1-218, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-218ENST00000523055 WDSUB1Q8N9V3 476 aa13.73□□□□□ -0.21
PCM1-218ENST00000523055 WFDC11Q8NEX6 87 aa13.73□□□□□ -0.21
PCM1-218ENST00000523055 PIK3R3Q92569 461 aa13.73□□□□□ -0.21
PCM1-218ENST00000523055 TLCD1Q96CP7 247 aa13.73□□□□□ -0.21
PCM1-218ENST00000523055 GIMAP5Q96F15 307 aa13.73□□□□□ -0.21
PCM1-218ENST00000523055 ZBED6CLQ96FA7 236 aaPredicted RBP13.73□□□□□ -0.21
PCM1-218ENST00000523055 NUF2Q9BZD4 464 aa13.73□□□□□ -0.21
PCM1-218ENST00000523055 ACKR4Q9NPB9 350 aa13.73□□□□□ -0.21
PCM1-218ENST00000523055 SIRT3Q9NTG7 399 aaPredicted RBP13.73□□□□□ -0.21
PCM1-218ENST00000523055 QPCTLQ9NXS2 382 aa13.73□□□□□ -0.21
PCM1-218ENST00000523055 ATP6V1HQ9UI12 483 aa13.73□□□□□ -0.21
PCM1-218ENST00000523055 ACAD8Q9UKU7 415 aa13.73□□□□□ -0.21
PCM1-218ENST00000523055 SLC6A5Q9Y345 797 aa13.73□□□□□ -0.21
PCM1-218ENST00000523055 C15orf38-AP3S2A0A0A6YYH1 394 aa13.72□□□□□ -0.21
PCM1-218ENST00000523055 KDM4EB2RXH2 506 aaPredicted RBP13.72□□□□□ -0.21
PCM1-218ENST00000523055 BCKDKO14874 412 aa13.72□□□□□ -0.21
PCM1-218ENST00000523055 IGKV1D-16P01601 117 aa13.72□□□□□ -0.21
PCM1-218ENST00000523055 HPNP05981 417 aa13.72□□□□□ -0.21
PCM1-218ENST00000523055 GRK2P25098 689 aa13.72□□□□□ -0.21
PCM1-218ENST00000523055 ACVR2AP27037 513 aa13.72□□□□□ -0.21
PCM1-218ENST00000523055 KRT20P35900 424 aa13.72□□□□□ -0.21
PCM1-218ENST00000523055 RPL14P50914 215 aaKnown RBP13.72□□□□□ -0.21
PCM1-218ENST00000523055 DIO3P55073 304 aa13.72□□□□□ -0.21
PCM1-218ENST00000523055 NUP107P57740 925 aa13.72□□□□□ -0.21
PCM1-218ENST00000523055 STX3Q13277 289 aa13.72□□□□□ -0.21
PCM1-218ENST00000523055 SLC30A6Q6NXT4 461 aa13.72□□□□□ -0.21
PCM1-218ENST00000523055 YRDCQ86U90 279 aaKnown RBP13.72□□□□□ -0.21
PCM1-218ENST00000523055 RIMKLAQ8IXN7 391 aa13.72□□□□□ -0.21
PCM1-218ENST00000523055 NUP43Q8NFH3 380 aa13.72□□□□□ -0.21
PCM1-218ENST00000523055 OR1J4Q8NGS1 313 aa13.72□□□□□ -0.21
PCM1-218ENST00000523055 ZFP28Q8NHY6 868 aa13.72□□□□□ -0.21
PCM1-218ENST00000523055 RNF138Q8WVD3 245 aa13.72□□□□□ -0.21
PCM1-218ENST00000523055 RND1Q92730 232 aa13.72□□□□□ -0.21
PCM1-218ENST00000523055 SARAFQ96BY9 339 aa13.72□□□□□ -0.21
PCM1-218ENST00000523055 MBD6Q96DN6 1003 aa13.72□□□□□ -0.21
PCM1-218ENST00000523055 MTERF3Q96E29 417 aa13.72□□□□□ -0.21
PCM1-218ENST00000523055 LMF2Q9BU23 707 aaKnown RBP13.72□□□□□ -0.21
PCM1-218ENST00000523055 RTN4RQ9BZR6 473 aa13.72□□□□□ -0.21
PCM1-218ENST00000523055 AKTIPQ9H8T0 292 aa13.72□□□□□ -0.21
PCM1-218ENST00000523055 ACSS1Q9NUB1 689 aaPredicted RBP13.72□□□□□ -0.21
PCM1-218ENST00000523055 ALKBH4Q9NXW9 302 aa13.72□□□□□ -0.21
PCM1-218ENST00000523055 HAO1Q9UJM8 370 aa13.72□□□□□ -0.21
PCM1-218ENST00000523055 FBXL2Q9UKC9 423 aa13.72□□□□□ -0.21
PCM1-218ENST00000523055 CBLCQ9ULV8 474 aa13.72□□□□□ -0.21
PCM1-218ENST00000523055 WIF1Q9Y5W5 379 aa13.72□□□□□ -0.21
PCM1-218ENST00000523055 ANK3Q12955 4377 aaKnown RBP13.71□□□□□ -0.21
PCM1-218ENST00000523055 SCO2O43819 266 aa13.71□□□□□ -0.22
PCM1-218ENST00000523055 ACP2P11117 423 aa13.71□□□□□ -0.22
PCM1-218ENST00000523055 PRPS2P11908 318 aa13.71□□□□□ -0.22
PCM1-218ENST00000523055 PNLIPRP2P54317 469 aa13.71□□□□□ -0.22
PCM1-218ENST00000523055 GAS1P54826 345 aa13.71□□□□□ -0.22
PCM1-218ENST00000523055 WNT3P56703 355 aa13.71□□□□□ -0.22
PCM1-218ENST00000523055 CRYZQ08257 329 aaKnown RBP13.71□□□□□ -0.22
PCM1-218ENST00000523055 PMPCAQ10713 525 aa13.71□□□□□ -0.22
PCM1-218ENST00000523055 TMEM211Q6ICI0 200 aa13.71□□□□□ -0.22
PCM1-218ENST00000523055 R3HCC1LQ7Z5L2 792 aaKnown RBP13.71□□□□□ -0.22
PCM1-218ENST00000523055 FAM83FQ8NEG4 500 aaPredicted RBP13.71□□□□□ -0.22
PCM1-218ENST00000523055 ARL8AQ96BM9 186 aa13.71□□□□□ -0.22
PCM1-218ENST00000523055 TMCO6Q96DC7 493 aa13.71□□□□□ -0.22
PCM1-218ENST00000523055 RMND5BQ96G75 393 aaPredicted RBP13.71□□□□□ -0.22
PCM1-218ENST00000523055 C16orf58Q96GQ5 468 aa13.71□□□□□ -0.22
PCM1-218ENST00000523055 GPATCH1Q9BRR8 931 aaKnown RBP13.71□□□□□ -0.22
PCM1-218ENST00000523055 YIPF4Q9BSR8 244 aa13.71□□□□□ -0.22
PCM1-218ENST00000523055 POLDIP3Q9BY77 421 aaKnown RBP13.71□□□□□ -0.22
PCM1-218ENST00000523055 MARCOQ9UEW3 520 aaPredicted RBP13.71□□□□□ -0.22
PCM1-218ENST00000523055 HEATR5AQ86XA9 2040 aa13.7□□□□□ -0.22
PCM1-218ENST00000523055 FIGNL2A6NMB9 653 aa13.7□□□□□ -0.22
PCM1-218ENST00000523055 C6orf47O95873 294 aa13.7□□□□□ -0.22
PCM1-218ENST00000523055 IFI6P09912 130 aa13.7□□□□□ -0.22
PCM1-218ENST00000523055 TCEA1P23193 301 aaKnown RBP13.7□□□□□ -0.22
PCM1-218ENST00000523055 GABRA3P34903 492 aa13.7□□□□□ -0.22
PCM1-218ENST00000523055 EVI2BP34910 448 aa13.7□□□□□ -0.22
PCM1-218ENST00000523055 MAP3K8P41279 467 aa13.7□□□□□ -0.22
PCM1-218ENST00000523055 EMX2Q04743 252 aa13.7□□□□□ -0.22
PCM1-218ENST00000523055 SNTA1Q13424 505 aa13.7□□□□□ -0.22
PCM1-218ENST00000523055 EFR3AQ14156 821 aa13.7□□□□□ -0.22
PCM1-218ENST00000523055 WLSQ5T9L3 541 aa13.7□□□□□ -0.22
PCM1-218ENST00000523055 KRTAP1-3Q8IUG1 177 aa13.7□□□□□ -0.22
PCM1-218ENST00000523055 HOMEZQ8IX15 550 aa13.7□□□□□ -0.22
PCM1-218ENST00000523055 SLC16A11Q8NCK7 471 aa13.7□□□□□ -0.22
PCM1-218ENST00000523055 SLC9A6Q92581 669 aa13.7□□□□□ -0.22
PCM1-218ENST00000523055 HOXB13Q92826 284 aaPredicted RBP13.7□□□□□ -0.22
PCM1-218ENST00000523055 FAM120BQ96EK7 910 aaKnown RBP13.7□□□□□ -0.22
PCM1-218ENST00000523055 MS4A4EQ96PG1 132 aa13.7□□□□□ -0.22
PCM1-218ENST00000523055 TTYH2Q9BSA4 534 aa13.7□□□□□ -0.22
PCM1-218ENST00000523055 REPIN1Q9BWE0 567 aaKnown RBP13.7□□□□□ -0.22
PCM1-218ENST00000523055 CXorf36Q9H7Y0 433 aa13.7□□□□□ -0.22
PCM1-218ENST00000523055 Q9N2J8 555 aa13.7□□□□□ -0.22
PCM1-218ENST00000523055 RASSF1Q9NS23 344 aa13.7□□□□□ -0.22
PCM1-218ENST00000523055 NOP53Q9NZM5 478 aaKnown RBP13.7□□□□□ -0.22
PCM1-218ENST00000523055 EIF3LQ9Y262 564 aaKnown RBP13.7□□□□□ -0.22
PCM1-218ENST00000523055 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.7□□□□□ -0.22
PCM1-218ENST00000523055 A0A1W2PRB8 838 aa13.69□□□□□ -0.22
PCM1-218ENST00000523055 EMC8O43402 210 aa13.69□□□□□ -0.22
PCM1-218ENST00000523055 FADS1O60427 444 aa13.69□□□□□ -0.22
PCM1-218ENST00000523055 SNNO75324 88 aaPredicted RBP13.69□□□□□ -0.22
PCM1-218ENST00000523055 MPDZO75970 2070 aa13.69□□□□□ -0.22
PCM1-218ENST00000523055 GLI4P10075 376 aa13.69□□□□□ -0.22
PCM1-218ENST00000523055 BMP7P18075 431 aa13.69□□□□□ -0.22
PCM1-218ENST00000523055 ADH7P40394 386 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms