RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 GKN3PP0CG01 181 aa15.33■□□□□ 0.05
PCDHA3-201ENST00000522353 BMP4P12644 408 aa15.33■□□□□ 0.05
PCDHA3-201ENST00000522353 CDKN2CP42773 168 aa15.33■□□□□ 0.05
PCDHA3-201ENST00000522353 MAGEA6P43360 314 aa15.33■□□□□ 0.05
PCDHA3-201ENST00000522353 MAGEA12P43365 314 aa15.33■□□□□ 0.05
PCDHA3-201ENST00000522353 HSD17B7P56937 341 aa15.33■□□□□ 0.05
PCDHA3-201ENST00000522353 FAM205BPQ63HN1 556 aa15.33■□□□□ 0.05
PCDHA3-201ENST00000522353 DCDC5Q6ZRR9 648 aa15.33■□□□□ 0.05
PCDHA3-201ENST00000522353 MGLLQ99685 303 aa15.33■□□□□ 0.05
PCDHA3-201ENST00000522353 MYH1P12882 1939 aa15.33■□□□□ 0.05
PCDHA3-201ENST00000522353 LRRTM2O43300 516 aa15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 PRKYO43930 277 aa15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 GALR3O60755 368 aaPredicted RBP15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 FCER2P06734 321 aa15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 CTHP32929 405 aa15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 ACVR1BP36896 505 aa15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 MZT1Q08AG7 82 aa15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 VEZF1Q14119 521 aa15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 NAGSQ8N159 534 aa15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 ASB11Q8WXH4 323 aa15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 HDAC8Q9BY41 377 aa15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 SH3D21A4FU49 640 aa15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 INMT-MINDY4F8WBC2 141 aa15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 GRPRP30550 384 aa15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 MTNR1AP48039 350 aa15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 XKR5Q6UX68 686 aa15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 RAB11FIP2Q7L804 512 aa15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 MRPL21Q7Z2W9 205 aaKnown RBP15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 ZNF595Q8IYB9 648 aa15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 KDM1BQ8NB78 822 aa15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 TRMT10AQ8TBZ6 339 aaKnown RBP15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 UHRF1Q96T88 793 aaPredicted RBP15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 GAREM1Q9H706 876 aa15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 NGBQ9NPG2 151 aa15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 MROH6A6NGR9 719 aa15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 PEX14O75381 377 aa15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 ABLIM3O94929 683 aa15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 CKMT1AP12532 417 aa15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 AMY2BP19961 511 aa15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 PTPRZ1P23471 2315 aaPredicted RBP15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 EIF2DP41214 584 aaKnown RBP15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 RGRP47804 291 aa15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 PHC1P78364 1004 aa15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 PIGGQ5H8A4 983 aa15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 MANEAQ5SRI9 462 aa15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 C6orf132Q5T0Z8 1188 aa15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 OR5K2Q8NHB8 316 aa15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 ISOC1Q96CN7 298 aa15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 ADOQ96SZ5 270 aa15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 HIF3AQ9Y2N7 669 aa15.33■□□□□ 0.04
PCDHA3-201ENST00000522353 LDB3O75112 727 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 ATG12O94817 140 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 CD79AP11912 226 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 GTF2F2P13984 249 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 ZNF431Q8TF32 576 aaPredicted RBP15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 ZFAND2BQ8WV99 257 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 MAL2Q969L2 176 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 KCND3Q9UK17 655 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 CA5BQ9Y2D0 317 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 SMIM30A4D0T7 59 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 G3V2L1 256 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 SIGLEC6O43699 453 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 C1SP09871 688 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 CFL1P23528 166 aaKnown RBP15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 PRKXP51817 358 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 GABARAPL2P60520 117 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 TMEM240Q5SV17 173 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 PAQR9Q6ZVX9 377 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 KLBQ86Z14 1044 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 OR52R1Q8NGF1 315 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 OR14A16Q8NHC5 309 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 FER1L6-AS2Q96M78 137 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 INSM2Q96T92 566 aaPredicted RBP15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 GSTO2Q9H4Y5 243 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 RDH8Q9NYR8 311 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 ZNF850A8MQ14 1090 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 TMEM225BP0DP42 221 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 STK11Q15831 433 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 RAB12Q6IQ22 244 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 PLBD1Q6P4A8 553 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 TMEM173Q86WV6 379 aaPredicted RBP15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 MARVELD2Q8N4S9 558 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 SUN5Q8TC36 379 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 SFXN5Q8TD22 340 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 TOPAZ1Q8N9V7 1692 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 RETP07949 1114 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 GNAO1P09471 354 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 SDC1P18827 310 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 FUT1P19526 365 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 CSNK1A1P48729 337 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 GLO1Q04760 184 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 RIPPLY1Q0D2K3 151 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 DCST2Q5T1A1 773 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 VTCN1Q7Z7D3 282 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 DEFB123Q8N688 67 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 RCBTB1Q8NDN9 531 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 PDLIM5Q96HC4 596 aaKnown RBP15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 KLHL15Q96M94 604 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 FAM86C1Q9NVL1 165 aa15.32■□□□□ 0.04
PCDHA3-201ENST00000522353 H7C417 338 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms