RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 ZNF440Q8IYI8 595 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 RNF175Q8N4F7 328 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 KLHDC9Q8NEP7 349 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 OR8J2Q8NGG1 315 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 COQ8AQ8NI60 647 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 FOXJ1Q92949 421 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 YIPF6Q96EC8 236 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 CLSTN3Q9BQT9 956 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 ZNF717Q9BY31 904 aaPredicted RBP13.04□□□□□ -0.32
SYNPO-205ENST00000522122 FKBP14Q9NWM8 211 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 FBXL3Q9UKT7 428 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 PCDHGA3Q9Y5H0 932 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 CSNK1G3Q9Y6M4 447 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 EIF2DP41214 584 aaKnown RBP13.04□□□□□ -0.32
SYNPO-205ENST00000522122 ARRB1P49407 418 aaPredicted RBP13.04□□□□□ -0.32
SYNPO-205ENST00000522122 ZNF41P51814 821 aaPredicted RBP13.04□□□□□ -0.32
SYNPO-205ENST00000522122 HBA1P69905 142 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 SLC35A2P78381 396 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 PYHIN1Q6K0P9 492 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 ELMOD2Q8IZ81 293 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 SLC39A11Q8N1S5 342 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 TRMT2BQ96GJ1 504 aaKnown RBP13.04□□□□□ -0.32
SYNPO-205ENST00000522122 DPCDQ9BVM2 203 aaPredicted RBP13.04□□□□□ -0.32
SYNPO-205ENST00000522122 NUFIP1Q9UHK0 495 aaKnown RBP13.04□□□□□ -0.32
SYNPO-205ENST00000522122 DHDHQ9UQ10 334 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 FRS3O43559 492 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 WDR5P61964 334 aaKnown RBP13.04□□□□□ -0.32
SYNPO-205ENST00000522122 SHC2P98077 582 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 LRRC37A5PQ49AS3 106 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 SFRP4Q6FHJ7 346 aaPredicted RBP13.04□□□□□ -0.32
SYNPO-205ENST00000522122 LRFN4Q6PJG9 635 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 PDZD3Q86UT5 571 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 FAM83FQ8NEG4 500 aaPredicted RBP13.04□□□□□ -0.32
SYNPO-205ENST00000522122 OR5D16Q8NGK9 328 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 MSANTD3Q96H12 275 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 ZC3H10Q96K80 434 aaKnown RBP13.04□□□□□ -0.32
SYNPO-205ENST00000522122 PSD2Q9BQI7 771 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 ARL6Q9H0F7 186 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 SFXN1Q9H9B4 322 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 FZD3Q9NPG1 666 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 GSKIPQ9P0R6 139 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 PRELID1Q9Y255 219 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 EVPLQ92817 2033 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 ACPPP15309 386 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 GRPRP30550 384 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 MC3RP41968 323 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 ART1P52961 327 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 ELOCQ15369 112 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 FAM76BQ5HYJ3 339 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 SGCDQ92629 289 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 DTD2Q96FN9 168 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 MS4A4EQ96PG1 132 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 ALG8Q9BVK2 526 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 DPH1Q9BZG8 443 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 PPIL3Q9H2H8 161 aaKnown RBP13.03□□□□□ -0.32
SYNPO-205ENST00000522122 THSD1Q9NS62 852 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 CLEC4EQ9ULY5 219 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 TEX13CA0A0J9YWL9 993 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 HMX3A6NHT5 357 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 ANKRD28O15084 1053 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 ADAM12O43184 909 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 H2BFMP0C1H6 154 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 GKN3PP0CG01 181 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 HTR2BP41595 481 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 RAB40BQ12829 278 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 AQP6Q13520 282 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 ARHGAP19Q14CB8 494 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 UBQLNLQ8IYU4 475 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 OR2T4Q8NH00 348 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 ZNF296Q8WUU4 475 aaPredicted RBP13.03□□□□□ -0.32
SYNPO-205ENST00000522122 CPNE2Q96FN4 548 aaPredicted RBP13.03□□□□□ -0.32
SYNPO-205ENST00000522122 ALKBH4Q9NXW9 302 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 EPHA6Q9UF33 1036 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 PADI2Q9Y2J8 665 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 SCN4AP35499 1836 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 CDC40O60508 579 aaKnown RBP eCLIP13.03□□□□□ -0.32
SYNPO-205ENST00000522122 KCNK5O95279 499 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 TIMP2P16035 220 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 LHCGRP22888 699 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 GRK5P34947 590 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 MGAT3Q09327 533 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 SPNS2Q8IVW8 549 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 CDRT4Q8N9R6 151 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 TSACCQ96A04 125 aaPredicted RBP13.03□□□□□ -0.32
SYNPO-205ENST00000522122 ZDHHC12Q96GR4 267 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 PRRC1Q96M27 445 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 PDE7BQ9NP56 450 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 MRPL15Q9P015 296 aaKnown RBP13.03□□□□□ -0.32
SYNPO-205ENST00000522122 SCGB1D2O95969 90 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 NUDT7P0C024 238 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 XAF1Q6GPH4 301 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 TMEM225Q6GV28 225 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 BHLHA9Q7RTU4 235 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 RASGRP3Q8IV61 690 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 L3MBTL4Q8NA19 623 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 CYB561A3Q8NBI2 242 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 DAZLQ92904 295 aaKnown RBP13.03□□□□□ -0.32
SYNPO-205ENST00000522122 PNPLA2Q96AD5 504 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 KLHL21Q9UJP4 597 aa13.03□□□□□ -0.32
SYNPO-205ENST00000522122 KLK4Q9Y5K2 254 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms