RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 TRAM2Q15035 370 aa6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 PTGES3Q15185 160 aaKnown RBP6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 DEFB134Q4QY38 66 aa6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 ENTPD8Q5MY95 495 aa6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 GPR107Q5VW38 600 aa6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 PGBD2Q6P3X8 592 aa6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 Q6ZS52 159 aa6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 C16orf62Q7Z3J2 963 aa6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 MRGPREQ86SM8 312 aa6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 PEX5LQ8IYB4 626 aa6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 CA13Q8N1Q1 262 aa6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 SLC43A2Q8N370 569 aa6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 C19orf47Q8N9M1 422 aaKnown RBP6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 MORN4Q8NDC4 146 aa6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 OR9Q2Q8NGE9 314 aa6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 OR5D16Q8NGK9 328 aa6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 OR8J1Q8NGP2 316 aa6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 OR10G6Q8NH81 332 aa6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 SLC38A4Q969I6 547 aa6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 CTHRC1Q96CG8 243 aa6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 YIPF6Q96EC8 236 aa6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 TCTN2Q96GX1 697 aa6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 PELOQ9BRX2 385 aaKnown RBP6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 COPS4Q9BT78 406 aa6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 FNDC11Q9BVV2 318 aa6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 FUNDC2Q9BWH2 189 aa6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 CDCA4Q9BXL8 241 aa6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 ZNF350Q9GZX5 532 aa6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 ARMC7Q9H6L4 198 aa6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 LMAN1LQ9HAT1 526 aa6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 SLC25A19Q9HC21 320 aa6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 LTB4R2Q9NPC1 389 aa6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 KRCC1Q9NPI7 259 aaPredicted RBP6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 C14orf105Q9NVL8 296 aa6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 RLIMQ9NVW2 624 aa6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 ZNF226Q9NYT6 803 aa6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 REV1Q9UBZ9 1251 aa6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 NDRG2Q9UN36 371 aaKnown RBP6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 MRPS33Q9Y291 106 aaKnown RBP6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 SNX11Q9Y5W9 270 aa6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 A3GALT2U3KPV4 340 aa6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 TMEM131Q92545 1883 aa6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 ATG2BQ96BY7 2078 aa6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 MYO9BQ13459 2157 aa6.25□□□□□ -1.41
CTNNA1-228ENST00000521640 TRBV4-1A0A0J9YWV2 114 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 FITM1A5D6W6 292 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 TLCD2A6NGC4 264 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 AGAP5A6NIR3 686 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 GLOD5A6NK44 160 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 CCDC85CA6NKD9 419 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 SNTNA6NMZ2 147 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 PTGES3LE9PB15 166 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 LMO7DNF2Z398 122 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 J3KTA2 159 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 TLR4O00206 839 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 ZNF749O43361 778 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 XPNPEP2O43895 674 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 KIAA0513O60268 411 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 OR10H3O60404 316 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 SEMA7AO75326 666 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 NME6O75414 186 aaPredicted RBP6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 PRKRAO75569 313 aaKnown RBP6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 UBXN7O94888 489 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 ATE1O95260 518 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 NSA2O95478 260 aaKnown RBP6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 EPPINO95925 133 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 BCL10O95999 233 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 GASTP01350 101 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 MT-ND2P03891 347 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 DBIP07108 87 aaKnown RBP6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 ALOX5P09917 674 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 MSL3P1P0C860 447 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 EPHA2P29317 976 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 FMO3P31513 532 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 CTSKP43235 329 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 LSSP48449 732 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 MASP1P48740 699 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 HNRNPKP61978 463 aaKnown RBP eCLIP6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 MAP4K2Q12851 820 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 FZD5Q13467 585 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 SEC23BQ15437 767 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 DECR1Q16698 335 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 PRICKLE4Q2TBC4 344 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 GPAT3Q53EU6 434 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 ZNF311Q5JNZ3 666 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 FGD3Q5JSP0 725 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 TCTE1Q5JU00 501 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 LAIR1Q6GTX8 287 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 FAM111BQ6SJ93 734 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 DEF8Q6ZN54 512 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 FRRS1Q6ZNA5 592 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 SLC16A12Q6ZSM3 486 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 ZNF367Q7RTV3 350 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 SZRD1Q7Z422 152 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 REC114Q7Z4M0 266 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 TRIM73Q86UV7 250 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 P2RY8Q86VZ1 359 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 MCATQ8IVS2 390 aaKnown RBP6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 SPACA3Q8IXA5 215 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 ZNF595Q8IYB9 648 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms