RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 DDCP20711 480 aa13.39□□□□□ -0.27
PRKDC-204ENST00000521331 TBXA2RP21731 343 aa13.39□□□□□ -0.27
PRKDC-204ENST00000521331 LOXP28300 417 aaPredicted RBP13.39□□□□□ -0.27
PRKDC-204ENST00000521331 SUCLG1P53597 346 aaKnown RBP13.39□□□□□ -0.27
PRKDC-204ENST00000521331 PSMD4P55036 377 aaKnown RBP13.39□□□□□ -0.27
PRKDC-204ENST00000521331 TPD52P55327 224 aaPredicted RBP13.39□□□□□ -0.27
PRKDC-204ENST00000521331 CLDN20P56880 219 aa13.39□□□□□ -0.27
PRKDC-204ENST00000521331 CKAP4Q07065 602 aaKnown RBP13.39□□□□□ -0.27
PRKDC-204ENST00000521331 STX5Q13190 355 aa13.39□□□□□ -0.27
PRKDC-204ENST00000521331 GUSBP1Q15486 140 aa13.39□□□□□ -0.27
PRKDC-204ENST00000521331 UNC50Q53HI1 259 aa13.39□□□□□ -0.27
PRKDC-204ENST00000521331 BEX5Q5H9J7 111 aa13.39□□□□□ -0.27
PRKDC-204ENST00000521331 SH2D4BQ5SQS7 431 aa13.39□□□□□ -0.27
PRKDC-204ENST00000521331 ZNF678Q5SXM1 525 aa13.39□□□□□ -0.27
PRKDC-204ENST00000521331 TEX35Q5T0J7 233 aa13.39□□□□□ -0.27
PRKDC-204ENST00000521331 PLEKHM3Q6ZWE6 761 aa13.39□□□□□ -0.27
PRKDC-204ENST00000521331 FAM214BQ7L5A3 538 aa13.39□□□□□ -0.27
PRKDC-204ENST00000521331 CTAGE4Q8IX94 777 aa13.39□□□□□ -0.27
PRKDC-204ENST00000521331 ANP32BQ92688 251 aaKnown RBP13.39□□□□□ -0.27
PRKDC-204ENST00000521331 C1GALT1C1Q96EU7 318 aa13.39□□□□□ -0.27
PRKDC-204ENST00000521331 KLHL4Q9C0H6 718 aa13.39□□□□□ -0.27
PRKDC-204ENST00000521331 CDC42EP4Q9H3Q1 356 aaKnown RBP13.39□□□□□ -0.27
PRKDC-204ENST00000521331 Q9N2J8 555 aa13.39□□□□□ -0.27
PRKDC-204ENST00000521331 STOML1Q9UBI4 398 aa13.39□□□□□ -0.27
PRKDC-204ENST00000521331 UQCRHLA0A096LP55 91 aa13.38□□□□□ -0.27
PRKDC-204ENST00000521331 KIAA1324LA8MWY0 1029 aaPredicted RBP13.38□□□□□ -0.27
PRKDC-204ENST00000521331 MYO1GB0I1T2 1018 aa13.38□□□□□ -0.27
PRKDC-204ENST00000521331 CNOT4O95628 575 aaKnown RBP13.38□□□□□ -0.27
PRKDC-204ENST00000521331 ENO1P06733 434 aaKnown RBP13.38□□□□□ -0.27
PRKDC-204ENST00000521331 SNRPAP09012 282 aaKnown RBP13.38□□□□□ -0.27
PRKDC-204ENST00000521331 ANXA4P09525 319 aaPredicted RBP13.38□□□□□ -0.27
PRKDC-204ENST00000521331 PAX1P15863 534 aa13.38□□□□□ -0.27
PRKDC-204ENST00000521331 PTH2RP49190 550 aa13.38□□□□□ -0.27
PRKDC-204ENST00000521331 NCBP2P52298 156 aaKnown RBP eCLIP13.38□□□□□ -0.27
PRKDC-204ENST00000521331 ETF1P62495 437 aaKnown RBP13.38□□□□□ -0.27
PRKDC-204ENST00000521331 ZNHIT3Q15649 155 aaPredicted RBP13.38□□□□□ -0.27
PRKDC-204ENST00000521331 SGCBQ16585 318 aa13.38□□□□□ -0.27
PRKDC-204ENST00000521331 FAM219BQ5XKK7 198 aa13.38□□□□□ -0.27
PRKDC-204ENST00000521331 DUSP19Q8WTR2 217 aa13.38□□□□□ -0.27
PRKDC-204ENST00000521331 DCAKDQ8WVC6 231 aa13.38□□□□□ -0.27
PRKDC-204ENST00000521331 C11orf24Q96F05 449 aaPredicted RBP13.38□□□□□ -0.27
PRKDC-204ENST00000521331 APIPQ96GX9 242 aa13.38□□□□□ -0.27
PRKDC-204ENST00000521331 EBPLQ9BY08 206 aa13.38□□□□□ -0.27
PRKDC-204ENST00000521331 CXorf56Q9H5V9 222 aa13.38□□□□□ -0.27
PRKDC-204ENST00000521331 HHATLQ9HCP6 504 aa13.38□□□□□ -0.27
PRKDC-204ENST00000521331 FANCFQ9NPI8 374 aa13.38□□□□□ -0.27
PRKDC-204ENST00000521331 SIRT5Q9NXA8 310 aa13.38□□□□□ -0.27
PRKDC-204ENST00000521331 DMGDHQ9UI17 866 aaKnown RBP13.38□□□□□ -0.27
PRKDC-204ENST00000521331 GRID1Q9ULK0 1009 aa13.38□□□□□ -0.27
PRKDC-204ENST00000521331 C19orf53Q9UNZ5 99 aaPredicted RBP13.38□□□□□ -0.27
PRKDC-204ENST00000521331 EMC9Q9Y3B6 208 aa13.38□□□□□ -0.27
PRKDC-204ENST00000521331 IGLV3-32A0A0A0MS00 114 aa13.37□□□□□ -0.27
PRKDC-204ENST00000521331 INAFM1C9JVW0 142 aa13.37□□□□□ -0.27
PRKDC-204ENST00000521331 POC1B-GALNT4F8VUJ3 575 aa13.37□□□□□ -0.27
PRKDC-204ENST00000521331 IL33O95760 270 aa13.37□□□□□ -0.27
PRKDC-204ENST00000521331 JUNP05412 331 aaKnown RBP13.37□□□□□ -0.27
PRKDC-204ENST00000521331 NTSP30990 170 aa13.37□□□□□ -0.27
PRKDC-204ENST00000521331 NR1H2P55055 460 aa13.37□□□□□ -0.27
PRKDC-204ENST00000521331 PKNOX1P55347 436 aa13.37□□□□□ -0.27
PRKDC-204ENST00000521331 ZNF763Q0D2J5 394 aa13.37□□□□□ -0.27
PRKDC-204ENST00000521331 EXOC3L2Q2M3D2 409 aa13.37□□□□□ -0.27
PRKDC-204ENST00000521331 ANKRD34AQ69YU3 496 aa13.37□□□□□ -0.27
PRKDC-204ENST00000521331 TMEM107Q6UX40 140 aa13.37□□□□□ -0.27
PRKDC-204ENST00000521331 LCA5Q86VQ0 697 aa13.37□□□□□ -0.27
PRKDC-204ENST00000521331 OR5M1Q8NGP8 315 aa13.37□□□□□ -0.27
PRKDC-204ENST00000521331 OR6K3Q8NGY3 331 aa13.37□□□□□ -0.27
PRKDC-204ENST00000521331 TMEM171Q8WVE6 324 aa13.37□□□□□ -0.27
PRKDC-204ENST00000521331 IGFBPL1Q8WX77 278 aa13.37□□□□□ -0.27
PRKDC-204ENST00000521331 TMEM237Q96Q45 408 aa13.37□□□□□ -0.27
PRKDC-204ENST00000521331 MDFIQ99750 246 aa13.37□□□□□ -0.27
PRKDC-204ENST00000521331 PRRG4Q9BZD6 226 aa13.37□□□□□ -0.27
PRKDC-204ENST00000521331 TBL1XR1Q9BZK7 514 aa13.37□□□□□ -0.27
PRKDC-204ENST00000521331 C3orf14Q9HBI5 128 aa13.37□□□□□ -0.27
PRKDC-204ENST00000521331 MIEF1Q9NQG6 463 aa13.37□□□□□ -0.27
PRKDC-204ENST00000521331 PLSCR4Q9NRQ2 329 aa13.37□□□□□ -0.27
PRKDC-204ENST00000521331 DDX18Q9NVP1 670 aaKnown RBP13.37□□□□□ -0.27
PRKDC-204ENST00000521331 PAQR5Q9NXK6 330 aaPredicted RBP13.37□□□□□ -0.27
PRKDC-204ENST00000521331 FLRT3Q9NZU0 649 aa13.37□□□□□ -0.27
PRKDC-204ENST00000521331 ATRQ13535 2644 aa13.37□□□□□ -0.27
PRKDC-204ENST00000521331 ROS1P08922 2347 aa13.36□□□□□ -0.27
PRKDC-204ENST00000521331 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.36□□□□□ -0.27
PRKDC-204ENST00000521331 SERTM1A2A2V5 107 aa13.36□□□□□ -0.27
PRKDC-204ENST00000521331 TTC36A6NLP5 189 aa13.36□□□□□ -0.27
PRKDC-204ENST00000521331 UPK1AO00322 258 aa13.36□□□□□ -0.27
PRKDC-204ENST00000521331 AQP8O94778 261 aa13.36□□□□□ -0.27
PRKDC-204ENST00000521331 PSMG1O95456 288 aa13.36□□□□□ -0.27
PRKDC-204ENST00000521331 PLGP00747 810 aaPredicted RBP13.36□□□□□ -0.27
PRKDC-204ENST00000521331 IMPDH1P20839 514 aa13.36□□□□□ -0.27
PRKDC-204ENST00000521331 ATP5F1P24539 256 aaPredicted RBP13.36□□□□□ -0.27
PRKDC-204ENST00000521331 HTR6P50406 440 aa13.36□□□□□ -0.27
PRKDC-204ENST00000521331 CTBP2P56545 445 aa13.36□□□□□ -0.27
PRKDC-204ENST00000521331 BTKQ06187 659 aa13.36□□□□□ -0.27
PRKDC-204ENST00000521331 C17orf67Q0P5P2 114 aa13.36□□□□□ -0.27
PRKDC-204ENST00000521331 C2orf80Q0P641 193 aa13.36□□□□□ -0.27
PRKDC-204ENST00000521331 LCP2Q13094 533 aa13.36□□□□□ -0.27
PRKDC-204ENST00000521331 TMEM44Q2T9K0 475 aa13.36□□□□□ -0.27
PRKDC-204ENST00000521331 LGSNQ5TDP6 509 aa13.36□□□□□ -0.27
PRKDC-204ENST00000521331 SYT10Q6XYQ8 523 aa13.36□□□□□ -0.27
PRKDC-204ENST00000521331 ZNF704Q6ZNC4 412 aaPredicted RBP13.36□□□□□ -0.27
PRKDC-204ENST00000521331 C22orf34Q6ZV56 151 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms