RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 PINX1Q96BK5 328 aaKnown RBP3.64□□□□□ -1.83
PTPN12-214ENST00000520947 TADA1Q96BN2 335 aa3.64□□□□□ -1.83
PTPN12-214ENST00000520947 ELMO2Q96JJ3 720 aa3.64□□□□□ -1.83
PTPN12-214ENST00000520947 MYCBPQ99417 103 aaPredicted RBP3.64□□□□□ -1.83
PTPN12-214ENST00000520947 DPH5Q9H2P9 285 aa3.64□□□□□ -1.83
PTPN12-214ENST00000520947 LPAR2Q9HBW0 351 aa3.64□□□□□ -1.83
PTPN12-214ENST00000520947 AGPAT5Q9NUQ2 364 aa3.64□□□□□ -1.83
PTPN12-214ENST00000520947 DUSP12Q9UNI6 340 aa3.64□□□□□ -1.83
PTPN12-214ENST00000520947 AP1M2Q9Y6Q5 423 aa3.64□□□□□ -1.83
PTPN12-214ENST00000520947 POGZQ7Z3K3 1410 aa3.63□□□□□ -1.83
PTPN12-214ENST00000520947 WASHC1A8K0Z3 465 aa3.63□□□□□ -1.83
PTPN12-214ENST00000520947 KLLNB2CW77 178 aa3.63□□□□□ -1.83
PTPN12-214ENST00000520947 SDHDO14521 159 aa3.63□□□□□ -1.83
PTPN12-214ENST00000520947 CASKO14936 926 aa3.63□□□□□ -1.83
PTPN12-214ENST00000520947 OR4F21O95013 312 aa3.63□□□□□ -1.83
PTPN12-214ENST00000520947 JCHAINP01591 159 aa3.63□□□□□ -1.83
PTPN12-214ENST00000520947 UMPSP11172 480 aa3.63□□□□□ -1.83
PTPN12-214ENST00000520947 SDC1P18827 310 aa3.63□□□□□ -1.83
PTPN12-214ENST00000520947 MDH1P40925 334 aaKnown RBP3.63□□□□□ -1.83
PTPN12-214ENST00000520947 ALDH3B2P48448 385 aa3.63□□□□□ -1.83
PTPN12-214ENST00000520947 KLHL30Q0D2K2 578 aa3.63□□□□□ -1.83
PTPN12-214ENST00000520947 Q1RN00 199 aa3.63□□□□□ -1.83
PTPN12-214ENST00000520947 TMEM52BQ4KMG9 183 aa3.63□□□□□ -1.83
PTPN12-214ENST00000520947 CYBRD1Q53TN4 286 aa3.63□□□□□ -1.83
PTPN12-214ENST00000520947 LGSNQ5TDP6 509 aa3.63□□□□□ -1.83
PTPN12-214ENST00000520947 SLX4IPQ5VYV7 408 aa3.63□□□□□ -1.83
PTPN12-214ENST00000520947 VITQ6UXI7 678 aa3.63□□□□□ -1.83
PTPN12-214ENST00000520947 GCNT7Q6ZNI0 430 aa3.63□□□□□ -1.83
PTPN12-214ENST00000520947 PARGQ86W56 976 aa3.63□□□□□ -1.83
PTPN12-214ENST00000520947 GPD1LQ8N335 351 aa3.63□□□□□ -1.83
PTPN12-214ENST00000520947 VN1R17PQ8TDU5 208 aa3.63□□□□□ -1.83
PTPN12-214ENST00000520947 GTSF1Q8WW33 167 aa3.63□□□□□ -1.83
PTPN12-214ENST00000520947 UPRTQ96BW1 309 aa3.63□□□□□ -1.83
PTPN12-214ENST00000520947 VPS35Q96QK1 796 aa3.63□□□□□ -1.83
PTPN12-214ENST00000520947 TBCDQ9BTW9 1192 aa3.63□□□□□ -1.83
PTPN12-214ENST00000520947 HCAR1Q9BXC0 346 aa3.63□□□□□ -1.83
PTPN12-214ENST00000520947 COQ10BQ9H8M1 238 aa3.63□□□□□ -1.83
PTPN12-214ENST00000520947 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.63□□□□□ -1.83
PTPN12-214ENST00000520947 RBM28Q9NW13 759 aaKnown RBP3.63□□□□□ -1.83
PTPN12-214ENST00000520947 UTP6Q9NYH9 597 aaKnown RBP3.63□□□□□ -1.83
PTPN12-214ENST00000520947 SLC2A6Q9UGQ3 507 aa3.63□□□□□ -1.83
PTPN12-214ENST00000520947 MFHAS1Q9Y4C4 1052 aa3.63□□□□□ -1.83
PTPN12-214ENST00000520947 GRIN2DO15399 1336 aa3.63□□□□□ -1.83
PTPN12-214ENST00000520947 CCDC7Q96M83 1385 aa3.63□□□□□ -1.83
PTPN12-214ENST00000520947 G3V3Y1 287 aa3.62□□□□□ -1.83
PTPN12-214ENST00000520947 CLDN3O15551 220 aa3.62□□□□□ -1.83
PTPN12-214ENST00000520947 TSC22D2O75157 780 aa3.62□□□□□ -1.83
PTPN12-214ENST00000520947 GJB5O95377 273 aa3.62□□□□□ -1.83
PTPN12-214ENST00000520947 SLC2A10O95528 541 aa3.62□□□□□ -1.83
PTPN12-214ENST00000520947 MBD3O95983 291 aa3.62□□□□□ -1.83
PTPN12-214ENST00000520947 SLC35E2P0CK97 266 aa3.62□□□□□ -1.83
PTPN12-214ENST00000520947 CT45A10P0DMU9 189 aa3.62□□□□□ -1.83
PTPN12-214ENST00000520947 THRBP10828 461 aa3.62□□□□□ -1.83
PTPN12-214ENST00000520947 UQCRBP14927 111 aa3.62□□□□□ -1.83
PTPN12-214ENST00000520947 XRCC1P18887 633 aaPredicted RBP3.62□□□□□ -1.83
PTPN12-214ENST00000520947 ACVR1BP36896 505 aa3.62□□□□□ -1.83
PTPN12-214ENST00000520947 PLOD1Q02809 727 aaPredicted RBP3.62□□□□□ -1.83
PTPN12-214ENST00000520947 ANKDD1AQ495B1 522 aa3.62□□□□□ -1.83
PTPN12-214ENST00000520947 ATAD3CQ5T2N8 411 aa3.62□□□□□ -1.83
PTPN12-214ENST00000520947 NIPAL3Q6P499 406 aa3.62□□□□□ -1.83
PTPN12-214ENST00000520947 AFTPHQ6ULP2 937 aa3.62□□□□□ -1.83
PTPN12-214ENST00000520947 TMEM184AQ6ZMB5 413 aa3.62□□□□□ -1.83
PTPN12-214ENST00000520947 ERICH1Q86X53 443 aa3.62□□□□□ -1.83
PTPN12-214ENST00000520947 DHTKD1Q96HY7 919 aaPredicted RBP3.62□□□□□ -1.83
PTPN12-214ENST00000520947 TM2D1Q9BX74 207 aa3.62□□□□□ -1.83
PTPN12-214ENST00000520947 MRPL13Q9BYD1 178 aaKnown RBP3.62□□□□□ -1.83
PTPN12-214ENST00000520947 SLC25A51Q9H1U9 297 aa3.62□□□□□ -1.83
PTPN12-214ENST00000520947 ELOVL2Q9NXB9 296 aa3.62□□□□□ -1.83
PTPN12-214ENST00000520947 RSPH14Q9UHP6 348 aa3.62□□□□□ -1.83
PTPN12-214ENST00000520947 B9D1Q9UPM9 204 aa3.62□□□□□ -1.83
PTPN12-214ENST00000520947 NAALAD2Q9Y3Q0 740 aa3.62□□□□□ -1.83
PTPN12-214ENST00000520947 AP4B1Q9Y6B7 739 aa3.62□□□□□ -1.83
PTPN12-214ENST00000520947 ATAD2BQ9ULI0 1458 aa3.61□□□□□ -1.83
PTPN12-214ENST00000520947 FRG2CA6NGY1 282 aa3.61□□□□□ -1.83
PTPN12-214ENST00000520947 ZSCAN5BA6NJL1 495 aa3.61□□□□□ -1.83
PTPN12-214ENST00000520947 A8MX80 341 aa3.61□□□□□ -1.83
PTPN12-214ENST00000520947 SLC17A2O00624 439 aa3.61□□□□□ -1.83
PTPN12-214ENST00000520947 THY1P04216 161 aa3.61□□□□□ -1.83
PTPN12-214ENST00000520947 ANXA3P12429 323 aa3.61□□□□□ -1.83
PTPN12-214ENST00000520947 IL2RGP31785 369 aa3.61□□□□□ -1.83
PTPN12-214ENST00000520947 RPL4P36578 427 aaKnown RBP3.61□□□□□ -1.83
PTPN12-214ENST00000520947 DLSTP36957 453 aa3.61□□□□□ -1.83
PTPN12-214ENST00000520947 MAGEA9P43362 315 aa3.61□□□□□ -1.83
PTPN12-214ENST00000520947 ERVPABLB-1P60509 514 aa3.61□□□□□ -1.83
PTPN12-214ENST00000520947 PUDPQ08623 228 aa3.61□□□□□ -1.83
PTPN12-214ENST00000520947 LINC01620Q4KN68 170 aa3.61□□□□□ -1.83
PTPN12-214ENST00000520947 ZNF311Q5JNZ3 666 aa3.61□□□□□ -1.83
PTPN12-214ENST00000520947 ASPHD2Q6ICH7 369 aa3.61□□□□□ -1.83
PTPN12-214ENST00000520947 SULT1C3Q6IMI6 304 aa3.61□□□□□ -1.83
PTPN12-214ENST00000520947 CYS1Q717R9 158 aa3.61□□□□□ -1.83
PTPN12-214ENST00000520947 ZNF573Q86YE8 665 aa3.61□□□□□ -1.83
PTPN12-214ENST00000520947 Q8N9G6 341 aaPredicted RBP3.61□□□□□ -1.83
PTPN12-214ENST00000520947 STKLD1Q8NE28 680 aa3.61□□□□□ -1.83
PTPN12-214ENST00000520947 KLHL30-AS1Q8NEE0 82 aa3.61□□□□□ -1.83
PTPN12-214ENST00000520947 DENND6BQ8NEG7 585 aa3.61□□□□□ -1.83
PTPN12-214ENST00000520947 HPDLQ96IR7 371 aa3.61□□□□□ -1.83
PTPN12-214ENST00000520947 VPS39Q96JC1 886 aa3.61□□□□□ -1.83
PTPN12-214ENST00000520947 CCT8L2Q96SF2 557 aa3.61□□□□□ -1.83
PTPN12-214ENST00000520947 TMEM121Q9BTD3 319 aa3.61□□□□□ -1.83
PTPN12-214ENST00000520947 COMMD4Q9H0A8 199 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms