RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 C6orf120Q7Z4R8 191 aa8.1□□□□□ -1.11
CTNNA1-223ENST00000520520 KIAA0907Q7Z7F0 614 aaPredicted RBP8.1□□□□□ -1.11
CTNNA1-223ENST00000520520 GALNT12Q8IXK2 581 aa8.1□□□□□ -1.11
CTNNA1-223ENST00000520520 CELF2-AS1Q8N7Q2 184 aa8.1□□□□□ -1.11
CTNNA1-223ENST00000520520 TCEANCQ8N8B7 351 aa8.1□□□□□ -1.11
CTNNA1-223ENST00000520520 C19orf18Q8NEA5 215 aa8.1□□□□□ -1.11
CTNNA1-223ENST00000520520 TOR1AIP2Q8NFQ8 470 aa8.1□□□□□ -1.11
CTNNA1-223ENST00000520520 OR56A1Q8NGH5 318 aa8.1□□□□□ -1.11
CTNNA1-223ENST00000520520 GNPDA2Q8TDQ7 276 aa8.1□□□□□ -1.11
CTNNA1-223ENST00000520520 SLC38A5Q8WUX1 472 aa8.1□□□□□ -1.11
CTNNA1-223ENST00000520520 APOBEC4Q8WW27 367 aaKnown RBP8.1□□□□□ -1.11
CTNNA1-223ENST00000520520 ASB15Q8WXK1 588 aa8.1□□□□□ -1.11
CTNNA1-223ENST00000520520 OR8D1Q8WZ84 308 aa8.1□□□□□ -1.11
CTNNA1-223ENST00000520520 VOPP1Q96AW1 172 aa8.1□□□□□ -1.11
CTNNA1-223ENST00000520520 NXPE2Q96DL1 559 aa8.1□□□□□ -1.11
CTNNA1-223ENST00000520520 COQ10AQ96MF6 247 aa8.1□□□□□ -1.11
CTNNA1-223ENST00000520520 IL4I1Q96RQ9 567 aa8.1□□□□□ -1.11
CTNNA1-223ENST00000520520 ELF4Q99607 663 aaPredicted RBP8.1□□□□□ -1.11
CTNNA1-223ENST00000520520 TRAF4Q9BUZ4 470 aaPredicted RBP8.1□□□□□ -1.11
CTNNA1-223ENST00000520520 RAB11FIP5Q9BXF6 653 aa8.1□□□□□ -1.11
CTNNA1-223ENST00000520520 PINK1Q9BXM7 581 aa8.1□□□□□ -1.11
CTNNA1-223ENST00000520520 MS4A8Q9BY19 250 aa8.1□□□□□ -1.11
CTNNA1-223ENST00000520520 PCED1AQ9H1Q7 454 aa8.1□□□□□ -1.11
CTNNA1-223ENST00000520520 TP63Q9H3D4 680 aaPredicted RBP8.1□□□□□ -1.11
CTNNA1-223ENST00000520520 TPK1Q9H3S4 243 aa8.1□□□□□ -1.11
CTNNA1-223ENST00000520520 BCL2L10Q9HD36 194 aa8.1□□□□□ -1.11
CTNNA1-223ENST00000520520 FGF20Q9NP95 211 aaPredicted RBP8.1□□□□□ -1.11
CTNNA1-223ENST00000520520 WASH6PQ9NQA3 447 aa8.1□□□□□ -1.11
CTNNA1-223ENST00000520520 GIMAP4Q9NUV9 329 aa8.1□□□□□ -1.11
CTNNA1-223ENST00000520520 MED17Q9NVC6 651 aa8.1□□□□□ -1.11
CTNNA1-223ENST00000520520 MRPS18AQ9NVS2 196 aaKnown RBP8.1□□□□□ -1.11
CTNNA1-223ENST00000520520 ERVK13-1Q9NX77 482 aa8.1□□□□□ -1.11
CTNNA1-223ENST00000520520 KLHL28Q9NXS3 571 aa8.1□□□□□ -1.11
CTNNA1-223ENST00000520520 TAS2R16Q9NYV7 291 aa8.1□□□□□ -1.11
CTNNA1-223ENST00000520520 TAS2R7Q9NYW3 318 aa8.1□□□□□ -1.11
CTNNA1-223ENST00000520520 REV1Q9UBZ9 1251 aa8.1□□□□□ -1.11
CTNNA1-223ENST00000520520 TBC1D24Q9ULP9 559 aa8.1□□□□□ -1.11
CTNNA1-223ENST00000520520 URB1O60287 2271 aaKnown RBP8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 A0A087WV48 116 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 TBC1D3DA0A087WVF3 549 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 TBC1D3IA0A087WXS9 549 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 TBC1D3EA0A087X179 549 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 TBC1D3KA0A087X1G2 549 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 A0A0G2JPF8 293 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 A0A1W2PPC4 97 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 A0A1W2PQ09 198 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 MEIOCA2RUB1 952 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 KRT87PA6NCN2 255 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 TBC1D3FA6NER0 549 aaPredicted RBP8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 HNRNPCL2B2RXH8 293 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 HNRNPCL3B7ZW38 293 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 TBC1D3LB9A6J9 549 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 M0R129 80 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 SAP18O00422 153 aaKnown RBP8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 SYT5O00445 386 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 KPNA3O00505 521 aaPredicted RBP8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 CTDSP2O14595 271 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 RRP8O43159 456 aaKnown RBP8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 DKK1O94907 266 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 SOX14O95416 240 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 ALPPP05187 535 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 TBC1D3HP0C7X1 549 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 HNRNPCL4P0DMR1 293 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 CKMT1AP12532 417 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 ZNF24P17028 368 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 GALP22466 123 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 TCEA1P23193 301 aaKnown RBP8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 MYL9P24844 172 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 HLA-DMAP28067 261 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 CD38P28907 300 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 RPS19P39019 145 aaKnown RBP8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 FRKP42685 505 aaPredicted RBP8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 CRYBB2P43320 205 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 NR4A2P43354 598 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 ARFIP1P53367 373 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 LIM2P55344 173 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 PPP2CBP62714 309 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 PPP2CAP67775 309 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 CXADRP78310 365 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 MC1RQ01726 317 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 HSPB3Q12988 150 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 HNRNPA0Q13151 305 aaKnown RBP8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 TP53BP2Q13625 1128 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 TPBGQ13641 420 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 TRAM2Q15035 370 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 SEC23BQ15437 767 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 MPEG1Q2M385 716 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 ZNF658BQ4V348 819 aaPredicted RBP8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 PYDC2Q56P42 97 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 ENTPD8Q5MY95 495 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 ZNF648Q5T619 568 aaPredicted RBP8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 TBC1D3GQ6DHY5 549 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 TBC1D3CQ6IPX1 549 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 ADNP2Q6IQ32 1131 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 TCTN3Q6NUS6 607 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 SLC27A4Q6P1M0 643 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 PLET1Q6UQ28 207 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 QSOX2Q6ZRP7 698 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 PARS2Q7L3T8 475 aaKnown RBP8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 NRARPQ7Z6K4 114 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms