RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 DDX18Q9NVP1 670 aaKnown RBP11.23□□□□□ -0.61
CSMD1-205ENST00000519623 FAM120CQ9NX05 1096 aaKnown RBP11.23□□□□□ -0.61
CSMD1-205ENST00000519623 PACSIN3Q9UKS6 424 aa11.23□□□□□ -0.61
CSMD1-205ENST00000519623 PTGDR2Q9Y5Y4 395 aa11.23□□□□□ -0.61
CSMD1-205ENST00000519623 IGLV3-32A0A0A0MS00 114 aa11.22□□□□□ -0.61
CSMD1-205ENST00000519623 GXYLT2A0PJZ3 443 aa11.22□□□□□ -0.61
CSMD1-205ENST00000519623 OR2M5A3KFT3 312 aa11.22□□□□□ -0.61
CSMD1-205ENST00000519623 SH3D21A4FU49 640 aa11.22□□□□□ -0.61
CSMD1-205ENST00000519623 SLC22A20A6NK97 555 aa11.22□□□□□ -0.61
CSMD1-205ENST00000519623 SLC28A1O00337 649 aa11.22□□□□□ -0.61
CSMD1-205ENST00000519623 MSTNO14793 375 aa11.22□□□□□ -0.61
CSMD1-205ENST00000519623 DIAPH2O60879 1101 aa11.22□□□□□ -0.61
CSMD1-205ENST00000519623 TNFRSF21O75509 655 aa11.22□□□□□ -0.61
CSMD1-205ENST00000519623 CRCPO75575 148 aa11.22□□□□□ -0.61
CSMD1-205ENST00000519623 UTS2O95399 124 aa11.22□□□□□ -0.61
CSMD1-205ENST00000519623 KIR2DL2P43627 348 aaPredicted RBP11.22□□□□□ -0.61
CSMD1-205ENST00000519623 CPA2P48052 419 aa11.22□□□□□ -0.61
CSMD1-205ENST00000519623 PCYT1AP49585 367 aa11.22□□□□□ -0.61
CSMD1-205ENST00000519623 DIO3P55073 304 aa11.22□□□□□ -0.61
CSMD1-205ENST00000519623 ADAM8P78325 824 aa11.22□□□□□ -0.61
CSMD1-205ENST00000519623 SLC18A2Q05940 514 aa11.22□□□□□ -0.61
CSMD1-205ENST00000519623 FAM27E3Q08E93 113 aa11.22□□□□□ -0.61
CSMD1-205ENST00000519623 FOXD4Q12950 439 aaPredicted RBP11.22□□□□□ -0.61
CSMD1-205ENST00000519623 STX5Q13190 355 aa11.22□□□□□ -0.61
CSMD1-205ENST00000519623 GLYR1Q49A26 553 aaPredicted RBP11.22□□□□□ -0.61
CSMD1-205ENST00000519623 LIPMQ5VYY2 423 aa11.22□□□□□ -0.61
CSMD1-205ENST00000519623 FBXW10Q5XX13 1052 aa11.22□□□□□ -0.61
CSMD1-205ENST00000519623 CHMP1BQ7LBR1 199 aa11.22□□□□□ -0.61
CSMD1-205ENST00000519623 BTLAQ7Z6A9 289 aa11.22□□□□□ -0.61
CSMD1-205ENST00000519623 C10orf107Q8IVU9 208 aa11.22□□□□□ -0.61
CSMD1-205ENST00000519623 UBQLNLQ8IYU4 475 aa11.22□□□□□ -0.61
CSMD1-205ENST00000519623 OR5M1Q8NGP8 315 aa11.22□□□□□ -0.61
CSMD1-205ENST00000519623 OR2T11Q8NH01 316 aa11.22□□□□□ -0.61
CSMD1-205ENST00000519623 FIG4Q92562 907 aa11.22□□□□□ -0.61
CSMD1-205ENST00000519623 GFM2Q969S9 779 aaKnown RBP11.22□□□□□ -0.61
CSMD1-205ENST00000519623 C1GALT1C1Q96EU7 318 aa11.22□□□□□ -0.61
CSMD1-205ENST00000519623 ZNF764Q96H86 408 aaPredicted RBP11.22□□□□□ -0.61
CSMD1-205ENST00000519623 FCRL1Q96LA6 429 aa11.22□□□□□ -0.61
CSMD1-205ENST00000519623 YIPF4Q9BSR8 244 aa11.22□□□□□ -0.61
CSMD1-205ENST00000519623 GATA5Q9BWX5 397 aaPredicted RBP11.22□□□□□ -0.61
CSMD1-205ENST00000519623 TUBB1Q9H4B7 451 aa11.22□□□□□ -0.61
CSMD1-205ENST00000519623 LRTM1Q9HBL6 345 aa11.22□□□□□ -0.61
CSMD1-205ENST00000519623 DLL4Q9NR61 685 aa11.22□□□□□ -0.61
CSMD1-205ENST00000519623 C1orf109Q9NX04 203 aa11.22□□□□□ -0.61
CSMD1-205ENST00000519623 NTMQ9P121 344 aa11.22□□□□□ -0.61
CSMD1-205ENST00000519623 MRTO4Q9UKD2 239 aaKnown RBP11.22□□□□□ -0.61
CSMD1-205ENST00000519623 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.21□□□□□ -0.61
CSMD1-205ENST00000519623 TTC36A6NLP5 189 aa11.21□□□□□ -0.61
CSMD1-205ENST00000519623 LINC01387J3KSC0 135 aa11.21□□□□□ -0.61
CSMD1-205ENST00000519623 COPEO14579 308 aa11.21□□□□□ -0.61
CSMD1-205ENST00000519623 AZIN1O14977 448 aa11.21□□□□□ -0.61
CSMD1-205ENST00000519623 TBX19O60806 448 aa11.21□□□□□ -0.61
CSMD1-205ENST00000519623 CGAP01215 116 aa11.21□□□□□ -0.61
CSMD1-205ENST00000519623 PRPS2P11908 318 aa11.21□□□□□ -0.61
CSMD1-205ENST00000519623 KRT4P19013 534 aa11.21□□□□□ -0.61
CSMD1-205ENST00000519623 CLDN20P56880 219 aa11.21□□□□□ -0.61
CSMD1-205ENST00000519623 EEFSECP57772 596 aaKnown RBP11.21□□□□□ -0.61
CSMD1-205ENST00000519623 PRR5P85299 388 aa11.21□□□□□ -0.61
CSMD1-205ENST00000519623 C17orf67Q0P5P2 114 aa11.21□□□□□ -0.61
CSMD1-205ENST00000519623 KEAP1Q14145 624 aa11.21□□□□□ -0.61
CSMD1-205ENST00000519623 GANABQ14697 944 aaKnown RBP11.21□□□□□ -0.61
CSMD1-205ENST00000519623 ZNHIT3Q15649 155 aaPredicted RBP11.21□□□□□ -0.61
CSMD1-205ENST00000519623 TMEM44Q2T9K0 475 aa11.21□□□□□ -0.61
CSMD1-205ENST00000519623 DEFB113Q30KQ7 82 aa11.21□□□□□ -0.61
CSMD1-205ENST00000519623 GRAMD1BQ3KR37 738 aa11.21□□□□□ -0.61
CSMD1-205ENST00000519623 RFTN2Q52LD8 501 aaPredicted RBP11.21□□□□□ -0.61
CSMD1-205ENST00000519623 ZNF385BQ569K4 471 aa11.21□□□□□ -0.61
CSMD1-205ENST00000519623 RAET1LQ5VY80 246 aa11.21□□□□□ -0.61
CSMD1-205ENST00000519623 OR2A2Q6IF42 318 aa11.21□□□□□ -0.61
CSMD1-205ENST00000519623 ANKRD26P1Q6NSI1 321 aa11.21□□□□□ -0.61
CSMD1-205ENST00000519623 VWA1Q6PCB0 445 aa11.21□□□□□ -0.61
CSMD1-205ENST00000519623 ZNF474Q6S9Z5 364 aaPredicted RBP11.21□□□□□ -0.61
CSMD1-205ENST00000519623 RNF165Q6ZSG1 346 aa11.21□□□□□ -0.61
CSMD1-205ENST00000519623 P4HA3Q7Z4N8 544 aa11.21□□□□□ -0.61
CSMD1-205ENST00000519623 EXOC3L1Q86VI1 746 aa11.21□□□□□ -0.61
CSMD1-205ENST00000519623 MEIOBQ8N635 442 aa11.21□□□□□ -0.61
CSMD1-205ENST00000519623 CCDC63Q8NA47 563 aa11.21□□□□□ -0.61
CSMD1-205ENST00000519623 FAM110BQ8TC76 370 aa11.21□□□□□ -0.61
CSMD1-205ENST00000519623 EPS8L3Q8TE67 593 aaKnown RBP11.21□□□□□ -0.61
CSMD1-205ENST00000519623 UBLCP1Q8WVY7 318 aaPredicted RBP11.21□□□□□ -0.61
CSMD1-205ENST00000519623 SMPDL3BQ92485 455 aa11.21□□□□□ -0.61
CSMD1-205ENST00000519623 PIK3R3Q92569 461 aa11.21□□□□□ -0.61
CSMD1-205ENST00000519623 CIDECQ96AQ7 238 aaPredicted RBP11.21□□□□□ -0.61
CSMD1-205ENST00000519623 GIMAP5Q96F15 307 aa11.21□□□□□ -0.61
CSMD1-205ENST00000519623 PGM2Q96G03 612 aa11.21□□□□□ -0.61
CSMD1-205ENST00000519623 WFIKKN1Q96NZ8 548 aa11.21□□□□□ -0.61
CSMD1-205ENST00000519623 PTGES2Q9H7Z7 377 aa11.21□□□□□ -0.61
CSMD1-205ENST00000519623 PPCSQ9HAB8 311 aa11.21□□□□□ -0.61
CSMD1-205ENST00000519623 NDRG3Q9UGV2 375 aa11.21□□□□□ -0.61
CSMD1-205ENST00000519623 BAIAP2L1Q9UHR4 511 aa11.21□□□□□ -0.61
CSMD1-205ENST00000519623 NUP214P35658 2090 aaPredicted RBP11.21□□□□□ -0.62
CSMD1-205ENST00000519623 VPS13CQ709C8 3753 aa11.21□□□□□ -0.62
CSMD1-205ENST00000519623 SMIM23A6NLE4 172 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 CASKO14936 926 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 PDPK1O15530 556 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 EMC8O43402 210 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 RGS14O43566 566 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 AKAP10O43572 662 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 NKX2-2O95096 273 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 ANGPTL1O95841 491 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms