RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 PDYNP01213 254 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 KRT6AP02538 564 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 KRT6BP04259 564 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 HIST1H2ABP04908 130 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 LYNP07948 512 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 LINGO3P0C6S8 592 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 BCKDHAP12694 445 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 ADRB3P13945 408 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 NCK1P16333 377 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 ZNF26P17031 533 aaPredicted RBP4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 SDC1P18827 310 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 HIST1H2ADP20671 130 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 HTR1EP28566 365 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 IMPA1P29218 277 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 PDHA2P29803 388 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 DCTDP32321 178 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 P2RY2P41231 377 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 KRT6CP48668 564 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 HNMTP50135 292 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 OR4D2P58180 307 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 MTPNP58546 118 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 ST8SIA6P61647 398 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 CFHR1Q03591 330 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 FAM27E3Q08E93 113 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 FCHO2Q0JRZ9 810 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 HYAL1Q12794 435 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 GK3PQ14409 553 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 ELAVL3Q14576 367 aaKnown RBP4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 PDGFRLQ15198 375 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 IMPG1Q17R60 797 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 FAM174BQ3ZCQ3 159 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 MIDNQ504T8 468 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 SPANXN4Q5MJ08 99 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 PIP5KL1Q5T9C9 394 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 KIAA1614Q5VZ46 1190 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 FCRLBQ6BAA4 426 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 RAET1GQ6H3X3 334 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 OR52E8Q6IFG1 317 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 ADNP2Q6IQ32 1131 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 NANOGP8Q6NSW7 305 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 SHQ1Q6PI26 577 aaKnown RBP4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 SYCE2Q6PIF2 218 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 TMEM220Q6QAJ8 160 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 PQLC2Q6ZP29 291 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 HIST3H2AQ7L7L0 130 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 ARPINQ7Z6K5 226 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 ZNF547Q8IVP9 402 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 AQP12AQ8IXF9 295 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 SLC22A15Q8IZD6 547 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 RNF175Q8N4F7 328 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 MARVELD2Q8N4S9 558 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 ANKFN1Q8N957 763 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 CATSPER1Q8NEC5 780 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 OR8K5Q8NH50 307 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 WDR20Q8TBZ3 569 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 SKA2Q8WVK7 121 aaPredicted RBP4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 CANT1Q8WVQ1 401 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 SLC13A3Q8WWT9 602 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 GTF2H4Q92759 462 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 MSI2Q96DH6 328 aaKnown RBP4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 ERLEC1Q96DZ1 483 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 CCDC115Q96NT0 180 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 OR4K3Q96R72 315 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 MYADMQ96S97 322 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 PKP4Q99569 1192 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 KCTD14Q9BQ13 255 aaPredicted RBP4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 PCGF1Q9BSM1 259 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 CCM2Q9BSQ5 444 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 TRIM15Q9C019 465 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 B3GNT4Q9C0J1 378 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 ATG10Q9H0Y0 220 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 IKZF5Q9H5V7 419 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 RPF2Q9H7B2 306 aaKnown RBP4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 ACTR8Q9H981 624 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 NANOGQ9H9S0 305 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 ZFP14Q9HCL3 533 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 ZDHHC4Q9NPG8 344 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 PRSS16Q9NQE7 514 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 BATF3Q9NR55 127 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 CYSLTR2Q9NS75 346 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 ARMC1Q9NVT9 282 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 C1orf109Q9NX04 203 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 SLC25A37Q9NYZ2 338 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 CISD1Q9NZ45 108 aaKnown RBP4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 GDE1Q9NZC3 331 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 ACTR3BQ9P1U1 418 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 DEC1Q9P2X7 70 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 THAP10Q9P2Z0 257 aaPredicted RBP4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 CIDEBQ9UHD4 219 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 CDH7Q9ULB5 785 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 SLC22A14Q9Y267 594 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 AP4S1Q9Y587 144 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 FADS3Q9Y5Q0 445 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 AP4B1Q9Y6B7 739 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 ANKRD12Q6UB98 2062 aa4.5□□□□□ -1.69
CTNNA1-212ENST00000518919 CEP290O15078 2479 aa4.49□□□□□ -1.69
CTNNA1-212ENST00000518919 CDH23Q9H251 3354 aa4.49□□□□□ -1.69
CTNNA1-212ENST00000518919 DOCK8Q8NF50 2099 aa4.49□□□□□ -1.69
CTNNA1-212ENST00000518919 TCRBV21S2A2A0A5A6 115 aa4.49□□□□□ -1.69
CTNNA1-212ENST00000518919 MAGEA13PA6NCF6 341 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms