RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 ZBTB18Q99592 522 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 ERP44Q9BS26 406 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 CRNKL1Q9BZJ0 848 aaKnown RBP2.86□□□□□ -1.95
VPS13B-207ENST00000518569 PKIBQ9C010 78 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 ELL3Q9HB65 397 aaPredicted RBP2.86□□□□□ -1.95
VPS13B-207ENST00000518569 SLC25A19Q9HC21 320 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 AMBNQ9NP70 447 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 KCNMB3Q9NPA1 279 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 AGPAT5Q9NUQ2 364 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 CHMP5Q9NZZ3 219 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 ANKMY1Q9P2S6 941 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 NARFQ9UHQ1 456 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 TDRKHQ9Y2W6 561 aaKnown RBP2.86□□□□□ -1.95
VPS13B-207ENST00000518569 SPACA6W5XKT8 324 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 FAM205AQ6ZU69 1335 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 KDRP35968 1356 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 DHX29Q7Z478 1369 aaKnown RBP2.86□□□□□ -1.95
VPS13B-207ENST00000518569 SOGA1O94964 1423 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 PTPRUQ92729 1446 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 GRIN2AQ12879 1464 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 A0A0A6YYD4 124 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 A0A1B0GVY2 172 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 ERICH2A1L162 156 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 ZSCAN5CA6NGD5 496 aaPredicted RBP2.85□□□□□ -1.95
VPS13B-207ENST00000518569 E9PAM4 449 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 PHF1O43189 567 aaPredicted RBP2.85□□□□□ -1.95
VPS13B-207ENST00000518569 CACNG3O60359 315 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 ATP6V1G1O75348 118 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 SPAG6O75602 509 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 KBTBD11O94819 623 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 MT-ATP6P00846 226 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 CHRNA1P02708 482 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 KRT8P05787 483 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 IVLP07476 585 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 SNRPCP09234 159 aaKnown RBP2.85□□□□□ -1.95
VPS13B-207ENST00000518569 HIST1H2AGP0C0S8 130 aaPredicted RBP2.85□□□□□ -1.95
VPS13B-207ENST00000518569 RALBP11234 206 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 NCF1P14598 390 aaPredicted RBP2.85□□□□□ -1.95
VPS13B-207ENST00000518569 GP9P14770 177 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 DNAJB1P25685 340 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 MSNP26038 577 aaKnown RBP2.85□□□□□ -1.95
VPS13B-207ENST00000518569 CALML3P27482 149 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 TNFRSF4P43489 277 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 ACADSBP45954 432 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 RABIFP47224 123 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 PITPNBP48739 271 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 CNN1P51911 297 aaKnown RBP2.85□□□□□ -1.95
VPS13B-207ENST00000518569 CARD18P57730 90 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 SSTP61278 116 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 SPIBQ01892 262 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 COTL1Q14019 142 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 ZSCAN26Q16670 478 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 CCDC57Q2TAC2 916 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 UNC50Q53HI1 259 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 LINC00242Q5T6M2 205 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 NEK5Q6P3R8 708 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 BAIAP2L2Q6UXY1 529 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 DLEU7Q6UYE1 221 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 MOB2Q70IA6 237 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 ASRGL1Q7L266 308 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 HIPK1Q86Z02 1210 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.85□□□□□ -1.95
VPS13B-207ENST00000518569 PSTKQ8IV42 348 aaKnown RBP2.85□□□□□ -1.95
VPS13B-207ENST00000518569 LINC00518Q8N0U6 118 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 TTC5Q8N0Z6 440 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 DNAAF3Q8N9W5 541 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 COLGALT1Q8NBJ5 622 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 LILRB4Q8NHJ6 448 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 DDI1Q8WTU0 396 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 P3H4Q92791 437 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 HIST1H2ACQ93077 130 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 MTMR9Q96QG7 549 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 ST6GALNAC5Q9BVH7 336 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 POLR1EQ9GZS1 481 aaKnown RBP2.85□□□□□ -1.95
VPS13B-207ENST00000518569 DCTPP1Q9H773 170 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 SYNDIG1Q9H7V2 258 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 PSTPIP2Q9H939 334 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 FARSBQ9NSD9 589 aaKnown RBP2.85□□□□□ -1.95
VPS13B-207ENST00000518569 ABCC13Q9NSE7 274 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 SENP1Q9P0U3 644 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 ERVK-18Q9QC07 812 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 MBD2Q9UBB5 411 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 EIF3KQ9UBQ5 218 aaKnown RBP2.85□□□□□ -1.95
VPS13B-207ENST00000518569 SEC14L4Q9UDX3 406 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 CD300AQ9UGN4 299 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 TRMT6Q9UJA5 497 aaKnown RBP2.85□□□□□ -1.95
VPS13B-207ENST00000518569 ASB3Q9Y575 518 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 AFF2P51816 1311 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 MYO3BQ8WXR4 1341 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 ADAMTSL3P82987 1691 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 TNIKQ9UKE5 1360 aa2.85□□□□□ -1.95
VPS13B-207ENST00000518569 SETD1AO15047 1707 aaKnown RBP2.85□□□□□ -1.95
VPS13B-207ENST00000518569 IQANK1A0A1B0GTG1 560 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 A0A1B0GWJ7 208 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 FAM230AA0A1W2PPH8 454 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 OR6C74A6NCV1 312 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 OR6C65A6NJZ3 312 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 KRTAP9-6A8MVA2 160 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 K7ERQ8 282 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 TLR4O00206 839 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms