RNA–Protein interactions for RNA: ENST00000516918.1

SCARNA11.1-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 132 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.1-201ENST00000516918 FARSBQ9NSD9 589 aaKnown RBP6.26□□□□□ -1.41
SCARNA11.1-201ENST00000516918 NINJ2Q9NZG7 142 aa6.26□□□□□ -1.41
SCARNA11.1-201ENST00000516918 UTS2RQ9UKP6 389 aa6.26□□□□□ -1.41
SCARNA11.1-201ENST00000516918 PSME2Q9UL46 239 aa6.26□□□□□ -1.41
SCARNA11.1-201ENST00000516918 ZNF175Q9Y473 711 aa6.26□□□□□ -1.41
SCARNA11.1-201ENST00000516918 OR10H1Q9Y4A9 318 aa6.26□□□□□ -1.41
SCARNA11.1-201ENST00000516918 TNPO3Q9Y5L0 923 aaKnown RBP6.26□□□□□ -1.41
SCARNA11.1-201ENST00000516918 MXRA5Q9NR99 2828 aa6.26□□□□□ -1.41
SCARNA11.1-201ENST00000516918 PCNX3Q9H6A9 2034 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 A0A096LPK6 155 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 PPP6CO00743 305 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 EIF1AYO14602 144 aaKnown RBP6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 CLOCKO15516 846 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 PHF1O43189 567 aaPredicted RBP6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 RIPK2O43353 540 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 CD5LO43866 347 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 NDUFS7O75251 213 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 BCAS2O75934 225 aaPredicted RBP6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 KLHL2O95198 593 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 PLGP00747 810 aaPredicted RBP6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 PDYNP01213 254 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 SOD3P08294 240 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 IL3P08700 152 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 ABHD2P08910 425 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 SNRPAP09012 282 aaKnown RBP6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 FAM153BP0C7A2 387 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 PPP3CBP16298 524 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 TSPAN8P19075 237 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 TYK2P29597 1187 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 ECHS1P30084 290 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 IDUAP35475 653 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 ACVR1BP36896 505 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 EIF1AXP47813 144 aaKnown RBP6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 RFX3P48380 749 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 PNLIPRP2P54317 469 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 CTBP2P56545 445 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 RPS3AP61247 264 aaKnown RBP6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 FAPQ12884 760 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 ZNF155Q12901 538 aaPredicted RBP6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 TRAF3Q13114 568 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 ACAP2Q15057 778 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 GUSBP1Q15486 140 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 TSC22D1Q15714 1073 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 UAP1Q16222 522 aaPredicted RBP6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 FAM153CQ494X1 144 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 KLC3Q6P597 504 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 CROCCP2Q86T23 111 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 MARCH3Q86UD3 253 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 HIPK1Q86Z02 1210 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 PLD6Q8N2A8 252 aaKnown RBP6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 C1orf52Q8N6N3 182 aaKnown RBP6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 GBP7Q8N8V2 638 aaPredicted RBP6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 OR4F6Q8NGB9 312 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 UHMK1Q8TAS1 419 aaKnown RBP6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 ZNF675Q8TD23 568 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 TRPC4APQ8TEL6 797 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 DUSP19Q8WTR2 217 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 RNF138Q8WVD3 245 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 UBLCP1Q8WVY7 318 aaPredicted RBP6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 SELENOMQ8WWX9 145 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 GFM2Q969S9 779 aaKnown RBP6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 GTPBP3Q969Y2 492 aaKnown RBP6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 MTBPQ96DY7 904 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 ZBED6CLQ96FA7 236 aaPredicted RBP6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 TRMT61AQ96FX7 289 aaKnown RBP6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 GPR78Q96P69 363 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 HBEGFQ99075 208 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 TMEM204Q9BSN7 226 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 NTMT1Q9BV86 223 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 ROPN1BQ9BZX4 212 aaPredicted RBP6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 VPS11Q9H270 941 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 CDC42EP4Q9H3Q1 356 aaKnown RBP6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 ROPN1Q9HAT0 212 aaPredicted RBP6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 ZBTB26Q9HCK0 441 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 PLSCR4Q9NRQ2 329 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 PCTPQ9UKL6 214 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 EMC9Q9Y3B6 208 aa6.25□□□□□ -1.41
SCARNA11.1-201ENST00000516918 EXOC1LA0A1B0GW35 172 aa6.24□□□□□ -1.41
SCARNA11.1-201ENST00000516918 CCDC189A1A4V9 331 aa6.24□□□□□ -1.41
SCARNA11.1-201ENST00000516918 HMX2A2RU54 273 aa6.24□□□□□ -1.41
SCARNA11.1-201ENST00000516918 OVOL3O00110 214 aa6.24□□□□□ -1.41
SCARNA11.1-201ENST00000516918 TLX2O43763 284 aaPredicted RBP6.24□□□□□ -1.41
SCARNA11.1-201ENST00000516918 CXCL13O43927 109 aa6.24□□□□□ -1.41
SCARNA11.1-201ENST00000516918 FADS1O60427 444 aa6.24□□□□□ -1.41
SCARNA11.1-201ENST00000516918 TMCC2O75069 709 aa6.24□□□□□ -1.41
SCARNA11.1-201ENST00000516918 ADAM11O75078 769 aa6.24□□□□□ -1.41
SCARNA11.1-201ENST00000516918 NTN1O95631 604 aa6.24□□□□□ -1.41
SCARNA11.1-201ENST00000516918 IGHV4-39P01824 125 aa6.24□□□□□ -1.41
SCARNA11.1-201ENST00000516918 ALDOAP04075 364 aaKnown RBP6.24□□□□□ -1.41
SCARNA11.1-201ENST00000516918 COL6A2P12110 1019 aa6.24□□□□□ -1.41
SCARNA11.1-201ENST00000516918 FCGR2AP12318 317 aa6.24□□□□□ -1.41
SCARNA11.1-201ENST00000516918 CHN1P15882 459 aa6.24□□□□□ -1.41
SCARNA11.1-201ENST00000516918 CCT5P48643 541 aa6.24□□□□□ -1.41
SCARNA11.1-201ENST00000516918 CDH13P55290 713 aa6.24□□□□□ -1.41
SCARNA11.1-201ENST00000516918 MRPS22P82650 360 aaKnown RBP6.24□□□□□ -1.41
SCARNA11.1-201ENST00000516918 ZNF844Q08AG5 666 aa6.24□□□□□ -1.41
SCARNA11.1-201ENST00000516918 IFFO1Q0D2I5 559 aa6.24□□□□□ -1.41
SCARNA11.1-201ENST00000516918 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.24□□□□□ -1.41
SCARNA11.1-201ENST00000516918 CHRFAM7AQ494W8 412 aa6.24□□□□□ -1.41
SCARNA11.1-201ENST00000516918 TECRLQ5HYJ1 363 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms