RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 CCDC162PA2VCL2 907 aa-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 SDHAF1A6NFY7 115 aa-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 YJEFN3A6XGL0 299 aa-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 E7EQL1 145 aa-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 TNFSF13O75888 250 aa-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 RTN3O95197 1032 aaPredicted RBP-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 ANP32DO95626 131 aa-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 TCP1P17987 556 aaKnown RBP-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 COX7A1P24310 79 aa-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 GJB2P29033 226 aa-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 APLNRP35414 380 aa-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 UBXN1Q04323 297 aa-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 SMARCB1Q12824 385 aa-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 GRB7Q14451 532 aa-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 EXOSC7Q15024 291 aaKnown RBP-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 C6orf163Q5TEZ5 329 aa-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 C6orf89Q6UWU4 347 aa-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 Q6ZRG5 221 aa-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 RFLNAQ6ZTI6 216 aa-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 NRARPQ7Z6K4 114 aa-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 CAMK2N1Q7Z7J9 78 aa-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 LCA5Q86VQ0 697 aa-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 PNKDQ8N490 385 aa-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 MINDY1Q8N5J2 469 aa-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 COLGALT1Q8NBJ5 622 aa-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 C1orf131Q8NDD1 294 aaKnown RBP-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 TSPAN14Q8NG11 270 aa-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 ZFP90Q8TF47 636 aa-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 SELENOMQ8WWX9 145 aa-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 SEPT8Q92599 483 aa-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 ATP6V0A1Q93050 837 aa-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 PSMG2Q969U7 264 aa-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 FAM129AQ9BZQ8 928 aa-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 MINDY3Q9H8M7 445 aa-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 SLC25A19Q9HC21 320 aa-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 FANCFQ9NPI8 374 aa-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 UVRAGQ9P2Y5 699 aa-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 SPRR3Q9UBC9 169 aa-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 OR12D3Q9UGF7 316 aa-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 FGD5Q6ZNL6 1462 aa-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 USP6P35125 1406 aa-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 CARMIL3Q8ND23 1372 aa-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 IGHV3OR16-8A0A075B7F1 116 aa-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 A0A1W2PPW3 197 aa-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 MEI4A8MW99 385 aa-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 C19orf81C9J6K1 198 aa-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 E9PLD3 99 aa-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 SLC28A1O00337 649 aa-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 MRPS12O15235 138 aaKnown RBP-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 PRC1O43663 620 aa-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 SCRG1O75711 98 aa-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 GHRP10912 638 aa-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 PCGF2P35227 344 aa-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 TRIM23P36406 574 aa-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 CXCL5P42830 114 aa-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 STARP49675 285 aa-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 RGS7P49802 495 aa-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 MFAP3P55082 362 aa-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 LIM2P55344 173 aa-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 PITPNAQ00169 270 aa-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 SPIBQ01892 262 aa-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 C1orf189Q5VU69 101 aa-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 ARMCX2Q7L311 632 aa-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 WDR86Q86TI4 376 aa-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 SKA3Q8IX90 412 aa-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 BATF2Q8N1L9 274 aa-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 SLC4A11Q8NBS3 891 aa-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 BLNKQ8WV28 456 aa-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 RTN4IP1Q8WWV3 396 aaPredicted RBP-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 HSPB9Q9BQS6 159 aa-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 TSPY26PQ9H489 355 aa-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 MEPEQ9NQ76 525 aaPredicted RBP-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 SLCO1C1Q9NYB5 712 aa-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 SLC25A37Q9NYZ2 338 aa-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 NOL12Q9UGY1 213 aaKnown RBP eCLIP-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 DCDC2Q9UHG0 476 aa-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 ZNF215Q9UL58 517 aaPredicted RBP-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 UBQLN1Q9UMX0 589 aaKnown RBP-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 TRAPPC4Q9Y296 219 aa-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 STRCP1A6NGW2 1772 aa-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 PTPRTO14522 1441 aa-1.07□□□□□ -2.58
SNORA40.13-201ENST00000516379 LRP1Q07954 4544 aaKnown RBP-1.08□□□□□ -2.58
SNORA40.13-201ENST00000516379 DOCK6Q96HP0 2047 aa-1.08□□□□□ -2.58
SNORA40.13-201ENST00000516379 AFF2P51816 1311 aa-1.08□□□□□ -2.58
SNORA40.13-201ENST00000516379 ATP6AP2A0A1C7CYW4 349 aa-1.08□□□□□ -2.58
SNORA40.13-201ENST00000516379 GTPBP10A4D1E9 387 aaKnown RBP-1.08□□□□□ -2.58
SNORA40.13-201ENST00000516379 C11orf98E9PRG8 122 aa-1.08□□□□□ -2.58
SNORA40.13-201ENST00000516379 ZNF207O43670 478 aaKnown RBP-1.08□□□□□ -2.58
SNORA40.13-201ENST00000516379 AHCYL1O43865 530 aa-1.08□□□□□ -2.58
SNORA40.13-201ENST00000516379 ZNF780AO75290 641 aaPredicted RBP-1.08□□□□□ -2.58
SNORA40.13-201ENST00000516379 CLN5O75503 358 aa-1.08□□□□□ -2.58
SNORA40.13-201ENST00000516379 LUC7L3O95232 432 aaKnown RBP-1.08□□□□□ -2.58
SNORA40.13-201ENST00000516379 EEF1B2P24534 225 aaKnown RBP-1.08□□□□□ -2.58
SNORA40.13-201ENST00000516379 ADORA2BP29275 332 aa-1.08□□□□□ -2.58
SNORA40.13-201ENST00000516379 OR1D2P34982 312 aa-1.08□□□□□ -2.58
SNORA40.13-201ENST00000516379 GDI2P50395 445 aaKnown RBP-1.08□□□□□ -2.58
SNORA40.13-201ENST00000516379 MRPS11P82912 194 aaKnown RBP-1.08□□□□□ -2.58
SNORA40.13-201ENST00000516379 DDX10Q13206 875 aaKnown RBP-1.08□□□□□ -2.58
SNORA40.13-201ENST00000516379 PLD1Q13393 1074 aa-1.08□□□□□ -2.58
SNORA40.13-201ENST00000516379 SNTB2Q13425 540 aaKnown RBP-1.08□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms