RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 TRMT11Q7Z4G4 463 aaKnown RBP2.66□□□□□ -1.98
HERC4-215ENST00000515753 GOLGA7Q7Z5G4 137 aa2.66□□□□□ -1.98
HERC4-215ENST00000515753 P2RY8Q86VZ1 359 aa2.66□□□□□ -1.98
HERC4-215ENST00000515753 NBPF5PQ86XG9 351 aaPredicted RBP2.66□□□□□ -1.98
HERC4-215ENST00000515753 CBWD2Q8IUF1 395 aa2.66□□□□□ -1.98
HERC4-215ENST00000515753 GRAMD2AQ8IUY3 354 aa2.66□□□□□ -1.98
HERC4-215ENST00000515753 GPC2Q8N158 579 aa2.66□□□□□ -1.98
HERC4-215ENST00000515753 ELMOD1Q8N336 334 aa2.66□□□□□ -1.98
HERC4-215ENST00000515753 CCDC185Q8N715 623 aa2.66□□□□□ -1.98
HERC4-215ENST00000515753 MLKLQ8NB16 471 aa2.66□□□□□ -1.98
HERC4-215ENST00000515753 CCDC197Q8NCU1 140 aa2.66□□□□□ -1.98
HERC4-215ENST00000515753 BHLHE23Q8NDY6 225 aa2.66□□□□□ -1.98
HERC4-215ENST00000515753 OR7A2PQ8NGA2 310 aa2.66□□□□□ -1.98
HERC4-215ENST00000515753 TCP11Q8WWU5 503 aa2.66□□□□□ -1.98
HERC4-215ENST00000515753 P3H4Q92791 437 aa2.66□□□□□ -1.98
HERC4-215ENST00000515753 MCHR2Q969V1 340 aa2.66□□□□□ -1.98
HERC4-215ENST00000515753 BPIFA2Q96DR5 249 aa2.66□□□□□ -1.98
HERC4-215ENST00000515753 PIWIL1Q96J94 861 aaKnown RBP2.66□□□□□ -1.98
HERC4-215ENST00000515753 C4orf36Q96KX1 117 aa2.66□□□□□ -1.98
HERC4-215ENST00000515753 LURAP1Q96LR2 239 aa2.66□□□□□ -1.98
HERC4-215ENST00000515753 PRICKLE1Q96MT3 831 aaPredicted RBP2.66□□□□□ -1.98
HERC4-215ENST00000515753 NDUFAF3Q9BU61 184 aa2.66□□□□□ -1.98
HERC4-215ENST00000515753 EDEM2Q9BV94 578 aa2.66□□□□□ -1.98
HERC4-215ENST00000515753 RBM24Q9BX46 236 aaKnown RBP2.66□□□□□ -1.98
HERC4-215ENST00000515753 CAPS2Q9BXY5 557 aa2.66□□□□□ -1.98
HERC4-215ENST00000515753 DGCR6LQ9BY27 220 aa2.66□□□□□ -1.98
HERC4-215ENST00000515753 CRNKL1Q9BZJ0 848 aaKnown RBP2.66□□□□□ -1.98
HERC4-215ENST00000515753 HOXD1Q9GZZ0 328 aa2.66□□□□□ -1.98
HERC4-215ENST00000515753 UPF3AQ9H1J1 476 aaKnown RBP2.66□□□□□ -1.98
HERC4-215ENST00000515753 ZNF665Q9H7R5 613 aa2.66□□□□□ -1.98
HERC4-215ENST00000515753 PANK3Q9H999 370 aa2.66□□□□□ -1.98
HERC4-215ENST00000515753 S100A14Q9HCY8 104 aa2.66□□□□□ -1.98
HERC4-215ENST00000515753 TEX10Q9NXF1 929 aaPredicted RBP2.66□□□□□ -1.98
HERC4-215ENST00000515753 ZNF319Q9P2F9 582 aa2.66□□□□□ -1.98
HERC4-215ENST00000515753 P2RX2Q9UBL9 471 aa2.66□□□□□ -1.98
HERC4-215ENST00000515753 PRDM4Q9UKN5 801 aa2.66□□□□□ -1.98
HERC4-215ENST00000515753 DIMT1Q9UNQ2 313 aaKnown RBP2.66□□□□□ -1.98
HERC4-215ENST00000515753 B9D1Q9UPM9 204 aa2.66□□□□□ -1.98
HERC4-215ENST00000515753 ATG4BQ9Y4P1 393 aa2.66□□□□□ -1.98
HERC4-215ENST00000515753 CSNK1G3Q9Y6M4 447 aa2.66□□□□□ -1.98
HERC4-215ENST00000515753 KDM6AO15550 1401 aaPredicted RBP2.66□□□□□ -1.98
HERC4-215ENST00000515753 CNTNAP1P78357 1384 aa2.65□□□□□ -1.98
HERC4-215ENST00000515753 ZNF318Q5VUA4 2279 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 RGPD8O14715 1765 aaPredicted RBP2.65□□□□□ -1.99
HERC4-215ENST00000515753 NKX6-3A6NJ46 265 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 ZSCAN5BA6NJL1 495 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 YJEFN3A6XGL0 299 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 ERVV-1B6SEH8 477 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 PPIAL4DF5H284 164 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 CLDN5O00501 218 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 PRRG1O14668 218 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 MAGEC1O60732 1142 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 CHRNA1P02708 482 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 CSF2P04141 144 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 RPL35AP18077 110 aaKnown RBP2.65□□□□□ -1.99
HERC4-215ENST00000515753 PRKACGP22612 351 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 PSMA2P25787 234 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 CTNNA2P26232 953 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 PPP2R1AP30153 589 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 EPHX2P34913 555 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 CA8P35219 290 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 MATKP42679 507 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 OR3A2P47893 321 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 ATP5OP48047 213 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 CEBPDP49716 269 aaPredicted RBP2.65□□□□□ -1.99
HERC4-215ENST00000515753 PPT1P50897 306 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 LIMK2P53671 638 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 PPIAP62937 165 aaKnown RBP2.65□□□□□ -1.99
HERC4-215ENST00000515753 HERVK_113P63132 956 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 ERVK-8P63133 956 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 GBE1Q04446 702 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 CNTN1Q12860 1018 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 RFTN1Q14699 578 aaPredicted RBP2.65□□□□□ -1.99
HERC4-215ENST00000515753 TRIP10Q15642 601 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 LRIT3Q3SXY7 679 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 ACSF3Q4G176 576 aaPredicted RBP2.65□□□□□ -1.99
HERC4-215ENST00000515753 DDI2Q5TDH0 399 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 LIPKQ5VXJ0 399 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 LIPJQ5W064 366 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 SEL1L3Q68CR1 1132 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 PRR5LQ6MZQ0 368 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 PAQR6Q6TCH4 344 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 RFPL4BQ6ZWI9 263 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 SMIM5Q71RC9 77 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 FCRLAQ7L513 359 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 ERASQ7Z444 233 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 LUZP1Q86V48 1076 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 ZC3H3Q8IXZ2 948 aaKnown RBP2.65□□□□□ -1.99
HERC4-215ENST00000515753 TEX26Q8N6G2 289 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 TRMT10AQ8TBZ6 339 aaKnown RBP2.65□□□□□ -1.99
HERC4-215ENST00000515753 RDH11Q8TC12 318 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 ATP8B4Q8TF62 1192 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 TMEM37Q8WXS4 190 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 SLC35C1Q96A29 364 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 ZNF486Q96H40 463 aaPredicted RBP2.65□□□□□ -1.99
HERC4-215ENST00000515753 CXorf58Q96LI9 332 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 RAB40CQ96S21 281 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 LRRC61Q9BV99 259 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 RAB11FIP5Q9BXF6 653 aa2.65□□□□□ -1.99
HERC4-215ENST00000515753 ERVK-6Q9BXR3 956 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms