RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 ICOSLGO75144 302 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 TRIM3O75382 744 aaPredicted RBP10.9□□□□□ -0.66
SNF8-215ENST00000515572 STX11O75558 287 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 DCTN3O75935 186 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 OR12D1P0DN82 309 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 HPGDP15428 266 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 TBXA2RP21731 343 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 EVI2BP34910 448 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 CRATP43155 626 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 MASP1P48740 699 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 DNASE1L1P49184 302 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 MVDP53602 400 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 MLLT10P55197 1068 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 CASP9P55211 416 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 HPCAP84074 193 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 PMP22Q01453 160 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 ALDH6A1Q02252 535 aaKnown RBP10.9□□□□□ -0.66
SNF8-215ENST00000515572 PLGLB1Q02325 96 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 TLE1Q04724 770 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 FADDQ13158 208 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 NFYCQ13952 458 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 PRR30Q53SZ7 412 aaPredicted RBP10.9□□□□□ -0.66
SNF8-215ENST00000515572 DESI1Q6ICB0 168 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 DLEU7Q6UYE1 221 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 BNC2Q6ZN30 1099 aaPredicted RBP10.9□□□□□ -0.66
SNF8-215ENST00000515572 DHDDSQ86SQ9 333 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 RETREG3Q86VR2 466 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 SLC22A16Q86VW1 577 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 SNX32Q86XE0 403 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 ZNF527Q8NB42 609 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 PNPT1Q8TCS8 783 aaKnown RBP10.9□□□□□ -0.66
SNF8-215ENST00000515572 XAGE5Q8WWM1 108 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 OIT3Q8WWZ8 545 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 NR4A3Q92570 626 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 ROPN1LQ96C74 230 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 DTNBP1Q96EV8 351 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 SDF2Q99470 211 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 CCDC106Q9BWC9 280 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 TBL1XR1Q9BZK7 514 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 MYLK2Q9H1R3 596 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 ZFP64Q9NPA5 681 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 QPCTLQ9NXS2 382 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 TUBA8Q9NY65 449 aaPredicted RBP10.9□□□□□ -0.66
SNF8-215ENST00000515572 SLC25A37Q9NYZ2 338 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 VAPAQ9P0L0 249 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.9□□□□□ -0.66
SNF8-215ENST00000515572 NTNG1Q9Y2I2 539 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 WIF1Q9Y5W5 379 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 KCNE3Q9Y6H6 103 aa10.9□□□□□ -0.66
SNF8-215ENST00000515572 SHANK1Q9Y566 2161 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 LOC100653049A0A140TA62 436 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 PINLYPA6NC86 204 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 EVPLLA8MZ36 301 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 HMGN4O00479 90 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 FBP2O00757 339 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 SCDO00767 359 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 MRASO14807 208 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 TFECO14948 347 aaPredicted RBP10.89□□□□□ -0.67
SNF8-215ENST00000515572 KRT34O76011 436 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 GLSO94925 669 aaPredicted RBP10.89□□□□□ -0.67
SNF8-215ENST00000515572 UNC5CO95185 931 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 GPX2P18283 190 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 PTGDSP41222 190 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 DSTNP60981 165 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 PPIAP62937 165 aaKnown RBP10.89□□□□□ -0.67
SNF8-215ENST00000515572 FOXO1Q12778 655 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 GNA13Q14344 377 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 RGNQ15493 299 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 TRMT5Q32P41 509 aaKnown RBP10.89□□□□□ -0.67
SNF8-215ENST00000515572 GRAMD1BQ3KR37 738 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 FLYWCH1Q4VC44 716 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 KRTCAP3Q53RY4 240 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 COX20Q5RI15 118 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.89□□□□□ -0.67
SNF8-215ENST00000515572 AP1ARQ63HQ0 302 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 BICRALQ6AI39 1079 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 ZNF605Q86T29 641 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 MSRB3Q8IXL7 192 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 FAM109AQ8N4B1 249 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 OR1J4Q8NGS1 313 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 OR4C3Q8NH37 302 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 PMM1Q92871 262 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 RAB8BQ92930 207 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 CMTM5Q96DZ9 223 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 AURKBQ96GD4 344 aaPredicted RBP10.89□□□□□ -0.67
SNF8-215ENST00000515572 JSRP1Q96MG2 331 aaPredicted RBP10.89□□□□□ -0.67
SNF8-215ENST00000515572 ANKRD27Q96NW4 1050 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 TRNT1Q96Q11 434 aaKnown RBP10.89□□□□□ -0.67
SNF8-215ENST00000515572 LRRC37BQ96QE4 947 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 CGREF1Q99674 301 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 SH3GL1Q99961 368 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 SLX1AQ9BQ83 275 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 TTTY12Q9BZ98 90 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 ZNF350Q9GZX5 532 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 GALNT9Q9HCQ5 603 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 GID8Q9NWU2 228 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 SLAMF8Q9P0V8 285 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 P2RX2Q9UBL9 471 aa10.89□□□□□ -0.67
SNF8-215ENST00000515572 CFAP46Q8IYW2 2715 aa10.88□□□□□ -0.67
SNF8-215ENST00000515572 NCKAP5O14513 1909 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms