RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 OMA1Q96E52 524 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 RMND5BQ96G75 393 aaPredicted RBP11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 SGCZQ96LD1 299 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 COL21A1Q96P44 957 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 BBC3Q96PG8 261 aaPredicted RBP11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 TREX2Q9BQ50 279 aaPredicted RBP11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 CADM1Q9BY67 442 aaKnown RBP11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 HOXD1Q9GZZ0 328 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 SLC38A1Q9H2H9 487 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 PRORYQ9H606 182 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 MTHFD2LQ9H903 347 aaPredicted RBP11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 SH2D2AQ9NP31 389 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 GPR83Q9NYM4 423 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 STMN3Q9NZ72 180 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 ADA2Q9NZK5 511 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 TUBD1Q9UJT1 453 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 LOC400499M0QZD8 3231 aa11.02□□□□□ -0.64
PDLIM5-220ENST00000514830 KIAA0513O60268 411 aa11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 MAN1A2O60476 641 aa11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 PGM3O95394 542 aa11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 H6PDO95479 791 aa11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 BCHEP06276 602 aa11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 CHRM4P08173 479 aa11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 NR2F1P10589 423 aa11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 RPS4Y1P22090 263 aaKnown RBP11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 KRT20P35900 424 aa11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 SOX3P41225 446 aa11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 CCL11P51671 97 aa11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 SCARB2Q14108 478 aa11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 ELOAQ14241 798 aaKnown RBP11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 ZNF141Q15928 474 aa11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 NNATQ16517 81 aa11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 SYPL1Q16563 259 aa11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 TBR1Q16650 682 aa11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 B3GNTL1Q67FW5 361 aaPredicted RBP11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 TYW3Q6IPR3 259 aaKnown RBP11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 FRRS1Q6ZNA5 592 aa11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 C16orf47Q6ZP98 133 aaPredicted RBP11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 PATL1Q86TB9 770 aaKnown RBP11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 BEST3Q8N1M1 668 aa11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 ANKFN1Q8N957 763 aa11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 FDCSPQ8NFU4 85 aa11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 ASB15Q8WXK1 588 aa11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 HAS2Q92819 552 aa11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 HGDQ93099 445 aa11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 OTUB1Q96FW1 271 aaPredicted RBP11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 TMEM19Q96HH6 336 aa11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 KCTD14Q9BQ13 255 aaPredicted RBP11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 RUBCNLQ9H714 662 aa11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 LIN28AQ9H9Z2 209 aaKnown RBP11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 HHATLQ9HCP6 504 aa11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 ABCG2Q9UNQ0 655 aa11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 ANGPT4Q9Y264 503 aa11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 WDR45Q9Y484 360 aa11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 EML6Q6ZMW3 1958 aa11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 LAMA5O15230 3695 aa11.02□□□□□ -0.65
PDLIM5-220ENST00000514830 CNTRLQ7Z7A1 2325 aa11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 A0A1W2PQD3 144 aa11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 ANKRD33BA6NCL7 494 aa11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 C5orf58C9J3I9 102 aa11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 TP53I11O14683 189 aa11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 SLC28A2O43868 658 aa11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 FCMRO60667 390 aa11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 UGT2B11O75310 529 aa11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 GCM2O75603 506 aaPredicted RBP11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 REM1O75628 298 aa11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 PDE9AO76083 593 aa11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 OR6B1O95007 311 aa11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 ZIC2O95409 532 aaPredicted RBP11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 GGT1P19440 569 aa11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 ENDOUP21128 410 aaKnown RBP11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 ATP6V1C1P21283 382 aa11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 TBXA2RP21731 343 aa11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 ME2P23368 584 aa11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 IL12BP29460 328 aa11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 PGM1P36871 562 aa11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 ADH7P40394 386 aa11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 CASRP41180 1078 aa11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 ATP12AP54707 1039 aa11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 CXADRP78310 365 aa11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 RPP38P78345 283 aaKnown RBP11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 HPCAP84074 193 aa11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 SNTA1Q13424 505 aa11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 TRIM25Q14258 630 aaKnown RBP11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 ZSWIM7Q19AV6 140 aa11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 GPAT3Q53EU6 434 aa11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 FCRLBQ6BAA4 426 aa11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 RTL4Q6ZR62 310 aa11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 ZNF619Q8N2I2 560 aa11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 FBXW8Q8N3Y1 598 aa11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 TMEM156Q8N614 296 aa11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 NFKBIDQ8NI38 313 aa11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 PAQR8Q8TEZ7 354 aa11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 POP5Q969H6 163 aaKnown RBP11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 MAL2Q969L2 176 aa11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 ASB9Q96DX5 294 aa11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 THTPAQ9BU02 230 aa11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 SPATA5L1Q9BVQ7 753 aa11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 ADNPQ9H2P0 1102 aa11.01□□□□□ -0.65
PDLIM5-220ENST00000514830 GORASP2Q9H8Y8 452 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms