RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 TAGAPQ8N103 731 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 EID3Q8N140 333 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 VWA5B2Q8N398 1253 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 MDS2Q8NDY4 140 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 VPS37AQ8NEZ2 397 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 OR10A6Q8NH74 314 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 ZNF675Q8TD23 568 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 ASB15Q8WXK1 588 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 PPCDCQ96CD2 204 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 SCMH1Q96GD3 660 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 SGCZQ96LD1 299 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 RASL10BQ96S79 203 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 THUMPD3Q9BV44 507 aaKnown RBP7.68□□□□□ -1.18
CCL28-204ENST00000514421 TRIM4Q9C037 500 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 VCXQ9H320 206 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 TIMMDC1Q9NPL8 285 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 ASF1BQ9NVP2 202 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 HPF1Q9NWY4 346 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 PRODH2Q9UF12 536 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.68□□□□□ -1.18
CCL28-204ENST00000514421 USP22Q9UPT9 525 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 HELZ2Q9BYK8 2649 aaKnown RBP7.68□□□□□ -1.18
CCL28-204ENST00000514421 SVILO95425 2214 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 A0A087WV62 115 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 MAGEA13PA6NCF6 341 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 A6NHS1 94 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 EVPLLA8MZ36 301 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 CLIC1O00299 241 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 UPK1AO00322 258 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 PLOD2O00469 737 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 CXCR6O00574 342 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 DLGAP1O14490 977 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 ACOX3O15254 700 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 ZNF354AO60765 605 aaPredicted RBP7.67□□□□□ -1.18
CCL28-204ENST00000514421 TIPRLO75663 272 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 SLC25A12O75746 678 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 OR6B1O95007 311 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 LRATO95237 230 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 CBX7O95931 251 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 CRYABP02511 175 aaKnown RBP7.67□□□□□ -1.18
CCL28-204ENST00000514421 NCK1P16333 377 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 NTSP30990 170 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 SOX18P35713 384 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 MAGEA2P43356 314 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 NR0B1P51843 470 aaKnown RBP7.67□□□□□ -1.18
CCL28-204ENST00000514421 MVDP53602 400 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 MANFP55145 182 aaKnown RBP7.67□□□□□ -1.18
CCL28-204ENST00000514421 DCAF7P61962 342 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 TXNL4AP83876 142 aaKnown RBP7.67□□□□□ -1.18
CCL28-204ENST00000514421 FOXK1P85037 733 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 MED21Q13503 144 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 ELOAQ14241 798 aaKnown RBP7.67□□□□□ -1.18
CCL28-204ENST00000514421 MLC1Q15049 377 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 EBPQ15125 230 aaKnown RBP7.67□□□□□ -1.18
CCL28-204ENST00000514421 INAQ16352 499 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 LRRC36Q1X8D7 754 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 GRAMD1BQ3KR37 738 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 ZNF385BQ569K4 471 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 GALNTL5Q7Z4T8 443 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 ATCAYQ86WG3 371 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 IFNEQ86WN2 208 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 PTOV1Q86YD1 416 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 EPHX4Q8IUS5 362 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 DND1Q8IYX4 353 aaKnown RBP7.67□□□□□ -1.18
CCL28-204ENST00000514421 CYP4Z2PQ8N1L4 340 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 C10orf111Q8N326 155 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 BCORP1Q8N888 145 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 TMEM178AQ8NBL3 297 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 C17orf47Q8NEP4 570 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 OR52R1Q8NGF1 315 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 OR9A2Q8NGT5 310 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 C16orf52Q8NHV5 167 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 PSMA8Q8TAA3 256 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 FAM110BQ8TC76 370 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 SLC22A8Q8TCC7 542 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 ZFP90Q8TF47 636 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 FAR1Q8WVX9 515 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 KAT2AQ92830 837 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 ADIPOR1Q96A54 375 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 MIB2Q96AX9 1013 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 EME1Q96AY2 570 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 FAM120BQ96EK7 910 aaKnown RBP7.67□□□□□ -1.18
CCL28-204ENST00000514421 AMDHD1Q96NU7 426 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 PANX1Q96RD7 426 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 GAL3ST4Q96RP7 486 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 BARD1Q99728 777 aaKnown RBP7.67□□□□□ -1.18
CCL28-204ENST00000514421 C9orf16Q9BUW7 83 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 OSBPL11Q9BXB4 747 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 UGT2B28Q9BY64 529 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 WWTR1Q9GZV5 400 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 GLIPR2Q9H4G4 154 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 Q9H521 79 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 YY1AP1Q9H869 796 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 KLHL1Q9NR64 748 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 ACSS1Q9NUB1 689 aaPredicted RBP7.67□□□□□ -1.18
CCL28-204ENST00000514421 VPS4AQ9UN37 437 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 ESPL1Q14674 2120 aa7.67□□□□□ -1.18
CCL28-204ENST00000514421 C7orf72A4D263 438 aa7.66□□□□□ -1.18
CCL28-204ENST00000514421 KLRC4-KLRK1H3BQV0 150 aa7.66□□□□□ -1.18
CCL28-204ENST00000514421 PDPK1O15530 556 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms