RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 SLCO4C1Q6ZQN7 724 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 QSOX2Q6ZRP7 698 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 PARS2Q7L3T8 475 aaKnown RBP9.06□□□□□ -0.96
VCAN-210ENST00000513960 PRSS45Q7RTY3 260 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 SYT9Q86SS6 491 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 NRSN1Q8IZ57 195 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 ADGRF3Q8IZF5 1079 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 KRT78Q8N1N4 520 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 ZNF433Q8N7K0 673 aaPredicted RBP9.06□□□□□ -0.96
VCAN-210ENST00000513960 OR6M1Q8NGM8 313 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 C16orf78Q8WTQ4 265 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 SLC38A5Q8WUX1 472 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 ING5Q8WYH8 240 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 MRGPRX3Q96LB0 322 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 ZSWIM3Q96MP5 696 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 SAMD11Q96NU1 681 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 GSX2Q9BZM3 304 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 SLC6A16Q9GZN6 736 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 SDHAF2Q9NX18 166 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 ELF5Q9UKW6 265 aaPredicted RBP9.06□□□□□ -0.96
VCAN-210ENST00000513960 FLVCR2Q9UPI3 526 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 GLOD5A6NK44 160 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 C1orf105O95561 183 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 LALBAP00709 142 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 ACSM4P0C7M7 580 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 ICAM2P13598 275 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 C4BPBP20851 252 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 MMP11P24347 488 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 RPL3P39023 403 aaKnown RBP9.05□□□□□ -0.96
VCAN-210ENST00000513960 SLC1A3P43003 542 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 GPR4P46093 362 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 RAE1P78406 368 aaKnown RBP9.05□□□□□ -0.96
VCAN-210ENST00000513960 ZNF77Q15935 545 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 SYPL1Q16563 259 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 TCTN3Q6NUS6 607 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 UBE2Q1Q7Z7E8 422 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 RASGRP3Q8IV61 690 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 SIAH3Q8IW03 269 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 DUSP18Q8NEJ0 188 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 GCDHQ92947 438 aaPredicted RBP9.05□□□□□ -0.96
VCAN-210ENST00000513960 QRSL1Q9H0R6 528 aaKnown RBP9.05□□□□□ -0.96
VCAN-210ENST00000513960 SLC25A19Q9HC21 320 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 C1GALT1Q9NS00 363 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 EXOSC1Q9Y3B2 195 aaKnown RBP9.05□□□□□ -0.96
VCAN-210ENST00000513960 PLXNB3Q9ULL4 1909 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 MYO7AQ13402 2215 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 TSPAN11A1L157 253 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 ARPC5O15511 151 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 GPR37L1O60883 481 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 REM1O75628 298 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 NTN1O95631 604 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 TFP02787 698 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 PRNPP04156 253 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 C1GALT1C1LP0DN25 315 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 ARAFP10398 606 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 NAT2P11245 290 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 PRG2P13727 222 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 DSG2Q14126 1118 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 OPCMLQ14982 345 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 ZNF697Q5TEC3 545 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 CEACAM19Q7Z692 300 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 ZNF740Q8NDX6 193 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 CXorf40BQ96DE9 158 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.05□□□□□ -0.96
VCAN-210ENST00000513960 PLA2G12AQ9BZM1 189 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 BHLHE41Q9C0J9 482 aaPredicted RBP9.05□□□□□ -0.96
VCAN-210ENST00000513960 KCNN2Q9H2S1 579 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 PPP1R3EQ9H7J1 279 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 CXorf36Q9H7Y0 433 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 NT5DC2Q9H857 520 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 TMEM138Q9NPI0 162 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 PLAGL1Q9UM63 463 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 COL4A6Q14031 1691 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.05□□□□□ -0.96
VCAN-210ENST00000513960 ZC3H12DA2A288 527 aaKnown RBP9.05□□□□□ -0.96
VCAN-210ENST00000513960 LINC00862A6NCI5 91 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 J3QLW9 94 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 PRODHO43272 600 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 SIX6O95475 246 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 RLN1P04808 185 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 GNSP15586 552 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 ZNF19P17023 458 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 ITGB8P26012 769 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 RFX3P48380 749 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 DHCR24Q15392 516 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 LGALSLQ3ZCW2 172 aaPredicted RBP9.05□□□□□ -0.96
VCAN-210ENST00000513960 C1orf53Q5VUE5 145 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 CXXC5Q7LFL8 322 aaKnown RBP9.05□□□□□ -0.96
VCAN-210ENST00000513960 MRPL43Q8N983 215 aaKnown RBP9.05□□□□□ -0.96
VCAN-210ENST00000513960 OR9A1PQ8NGU1 263 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 OSGEPL1Q9H4B0 414 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 DDX31Q9H8H2 851 aaKnown RBP9.05□□□□□ -0.96
VCAN-210ENST00000513960 CACYBPQ9HB71 228 aaKnown RBP9.05□□□□□ -0.96
VCAN-210ENST00000513960 NLGN3Q9NZ94 848 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 CKAP5Q14008 2032 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 hCG_1807616A0A1W2PRN6 198 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 TCRBV16S1A1N1A0A5B0 115 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 DAPL1A0PJW8 107 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 PIP5K1CO60331 668 aa9.05□□□□□ -0.96
VCAN-210ENST00000513960 MOSPD3O75425 235 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms