RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 BCL2L10Q9HD36 194 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 FBXW2Q9UKT8 454 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 CDC14AQ9UNH5 594 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 FAF1Q9UNN5 650 aaPredicted RBP9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 USP22Q9UPT9 525 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 MRPS33Q9Y291 106 aaKnown RBP9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 MEMO1Q9Y316 297 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 MRPS2Q9Y399 296 aaKnown RBP9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 NAALAD2Q9Y3Q0 740 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 TTC36A6NLP5 189 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 DUXAA6NLW8 204 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 SOCS6O14544 535 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 CTNSO60931 367 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 DEAF1O75398 565 aaPredicted RBP9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 PDE9AO76083 593 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 RASAL1O95294 804 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 TFPTP0C1Z6 253 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 SLC35E2P0CK97 266 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 ACADSP16219 412 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 PORP16435 677 aaPredicted RBP9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 NUP214P35658 2090 aaPredicted RBP9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 CHI3L1P36222 383 aaPredicted RBP9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 AVPR1BP47901 424 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 KHKP50053 298 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 CDK9P50750 372 aaKnown RBP9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 NCBP2P52298 156 aaKnown RBP eCLIP9.69□□□□□ -0.862e-10■□□□□ 8.4
PDLIM5-217ENST00000512274 HSD17B7P56937 341 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 DSTNP60981 165 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 ADAM8P78325 824 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 PMP22Q01453 160 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 GNA13Q14344 377 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 PPP4R4Q6NUP7 873 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 CLEC9AQ6UXN8 241 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 C3P1Q6ZMU1 363 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 SHISA6Q6ZSJ9 500 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 C6orf120Q7Z4R8 191 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 BIVMQ86UB2 503 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 RNF130Q86XS8 419 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 ACBD4Q8NC06 268 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 ZCCHC10Q8TBK6 192 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 RASSF5Q8WWW0 418 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 FIG4Q92562 907 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 N4BP2L2Q92802 583 aaPredicted RBP9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 FAM162AQ96A26 154 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 ELP4Q96EB1 424 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 PYURFQ96I23 114 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 LMF1Q96S06 567 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 PKP2Q99959 881 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 BDH2Q9BUT1 245 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 CHID1Q9BWS9 393 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 BTBD2Q9BX70 525 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 VCXQ9H320 206 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 IL1RAPQ9NPH3 570 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 ABI3Q9P2A4 366 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 C19orf53Q9UNZ5 99 aaPredicted RBP9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 LIPT1Q9Y234 373 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 ANGPT4Q9Y264 503 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 MMACHCQ9Y4U1 282 aa9.69□□□□□ -0.86
PDLIM5-217ENST00000512274 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 TRAV17A0A0B4J275 112 aa9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 HMGN4O00479 90 aa9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 CLDN4O14493 209 aa9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 CHST10O43529 356 aa9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 B4GALT2O60909 372 aa9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 GCM2O75603 506 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 BAG2O95816 211 aa9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 CRYABP02511 175 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 EIF2S1P05198 315 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 ETFAP13804 333 aa9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 ETS2P15036 469 aa9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 NCK1P16333 377 aa9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 ZNF26P17031 533 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 MMP11P24347 488 aa9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 MAP3K8P41279 467 aa9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 CRATP43155 626 aa9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 MAN2A2P49641 1150 aa9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 PRIM2P49643 509 aa9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 MEOX1P50221 254 aa9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 TNFSF10P50591 281 aa9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 XKP51811 444 aa9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 CRYBA2P53672 197 aa9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 CDK6Q00534 326 aa9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 FOLH1Q04609 750 aa9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 MAP4K2Q12851 820 aa9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 SCARB2Q14108 478 aa9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 DSG2Q14126 1118 aa9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 TRIP10Q15642 601 aa9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 ZNF628Q5EBL2 1059 aa9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 REEP3Q6NUK4 255 aa9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 MRPL14Q6P1L8 145 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 KIRREL2Q6UWL6 708 aa9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 ZC3H7AQ8IWR0 971 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 ST13P4Q8IZP2 240 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 SHISA5Q8N114 240 aa9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 METTL27Q8N6F8 245 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 OIT3Q8WWZ8 545 aa9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 DNAJC9Q8WXX5 260 aa9.68□□□□□ -0.86
PDLIM5-217ENST00000512274 GIMAP5Q96F15 307 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms