RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	ERVH48-1	M5A8F1	160 aa		13.34	□□□□□ -0.27
MATR3-238	ENST00000512107	ASNA1	O43681	348 aa		13.34	□□□□□ -0.27
MATR3-238	ENST00000512107	FADS1	O60427	444 aa		13.34	□□□□□ -0.27
MATR3-238	ENST00000512107	UTS2	O95399	124 aa		13.34	□□□□□ -0.27
MATR3-238	ENST00000512107	H6PD	O95479	791 aa		13.34	□□□□□ -0.27
MATR3-238	ENST00000512107	ARAF	P10398	606 aa		13.34	□□□□□ -0.27
MATR3-238	ENST00000512107	ESRRA	P11474	423 aa	Predicted RBP	13.34	□□□□□ -0.27
MATR3-238	ENST00000512107	CYB561	P49447	251 aa		13.34	□□□□□ -0.27
MATR3-238	ENST00000512107	SLC7A2	P52569	658 aa		13.34	□□□□□ -0.27
MATR3-238	ENST00000512107	CRYBA2	P53672	197 aa		13.34	□□□□□ -0.27
MATR3-238	ENST00000512107	GPR85	P60893	370 aa		13.34	□□□□□ -0.27
MATR3-238	ENST00000512107	ARG2	P78540	354 aa		13.34	□□□□□ -0.27
MATR3-238	ENST00000512107	ZNHIT3	Q15649	155 aa	Predicted RBP	13.34	□□□□□ -0.27
MATR3-238	ENST00000512107	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
MATR3-238	ENST00000512107	LACTB2	Q53H82	288 aa	Predicted RBP	13.34	□□□□□ -0.27
MATR3-238	ENST00000512107	FNDC7	Q5VTL7	733 aa		13.34	□□□□□ -0.27
MATR3-238	ENST00000512107	SLC6A19	Q695T7	634 aa		13.34	□□□□□ -0.27
MATR3-238	ENST00000512107	BHLHB9	Q6PI77	547 aa		13.34	□□□□□ -0.27
MATR3-238	ENST00000512107		Q6ZS92	163 aa		13.34	□□□□□ -0.27
MATR3-238	ENST00000512107	COMTD1	Q86VU5	262 aa		13.34	□□□□□ -0.27
MATR3-238	ENST00000512107	PTRH1	Q86Y79	214 aa	Known RBP	13.34	□□□□□ -0.27
MATR3-238	ENST00000512107	PCYOX1L	Q8NBM8	494 aa		13.34	□□□□□ -0.27
MATR3-238	ENST00000512107	FAM13C	Q8NE31	585 aa		13.34	□□□□□ -0.27
MATR3-238	ENST00000512107	DNAJB8	Q8NHS0	232 aa		13.34	□□□□□ -0.27
MATR3-238	ENST00000512107	NFKBID	Q8NI38	313 aa		13.34	□□□□□ -0.27
MATR3-238	ENST00000512107	PAQR8	Q8TEZ7	354 aa		13.34	□□□□□ -0.27
MATR3-238	ENST00000512107	ZNF524	Q96C55	264 aa		13.34	□□□□□ -0.27
MATR3-238	ENST00000512107	TMEM19	Q96HH6	336 aa		13.34	□□□□□ -0.27
MATR3-238	ENST00000512107	THUMPD3	Q9BV44	507 aa	Known RBP	13.34	□□□□□ -0.27
MATR3-238	ENST00000512107	ZNF350	Q9GZX5	532 aa		13.34	□□□□□ -0.27
MATR3-238	ENST00000512107	ADNP	Q9H2P0	1102 aa		13.34	□□□□□ -0.27
MATR3-238	ENST00000512107	TEKT2	Q9UIF3	430 aa		13.34	□□□□□ -0.27
MATR3-238	ENST00000512107	MKLN1	Q9UL63	735 aa		13.34	□□□□□ -0.27
MATR3-238	ENST00000512107	CHST2	Q9Y4C5	530 aa		13.34	□□□□□ -0.27
MATR3-238	ENST00000512107	CNTRL	Q7Z7A1	2325 aa		13.33	□□□□□ -0.28
MATR3-238	ENST00000512107	TTC36	A6NLP5	189 aa		13.33	□□□□□ -0.28
MATR3-238	ENST00000512107	CLDN24	A6NM45	220 aa		13.33	□□□□□ -0.28
MATR3-238	ENST00000512107	ABCB7	O75027	752 aa		13.33	□□□□□ -0.28
MATR3-238	ENST00000512107	SLC25A12	O75746	678 aa		13.33	□□□□□ -0.28
MATR3-238	ENST00000512107	OXSR1	O95747	527 aa	Predicted RBP	13.33	□□□□□ -0.28
MATR3-238	ENST00000512107	BCHE	P06276	602 aa		13.33	□□□□□ -0.28
MATR3-238	ENST00000512107	SP1	P08047	785 aa		13.33	□□□□□ -0.28
MATR3-238	ENST00000512107	RFC3	P40938	356 aa		13.33	□□□□□ -0.28
MATR3-238	ENST00000512107	DNASE1L1	P49184	302 aa		13.33	□□□□□ -0.28
MATR3-238	ENST00000512107	PNLIPRP2	P54317	469 aa		13.33	□□□□□ -0.28
MATR3-238	ENST00000512107	BNIP1	Q12981	228 aa		13.33	□□□□□ -0.28
MATR3-238	ENST00000512107	ART3	Q13508	389 aa		13.33	□□□□□ -0.28
MATR3-238	ENST00000512107	DECR1	Q16698	335 aa		13.33	□□□□□ -0.28
MATR3-238	ENST00000512107	NDUFAF6	Q330K2	333 aa		13.33	□□□□□ -0.28
MATR3-238	ENST00000512107	PRR30	Q53SZ7	412 aa	Predicted RBP	13.33	□□□□□ -0.28
MATR3-238	ENST00000512107	RNFT1	Q5M7Z0	435 aa		13.33	□□□□□ -0.28
MATR3-238	ENST00000512107	GCNT6	Q5T4J0	391 aa		13.33	□□□□□ -0.28
MATR3-238	ENST00000512107	RTL4	Q6ZR62	310 aa		13.33	□□□□□ -0.28
MATR3-238	ENST00000512107	NUP54	Q7Z3B4	507 aa		13.33	□□□□□ -0.28
MATR3-238	ENST00000512107	SULF2	Q8IWU5	870 aa		13.33	□□□□□ -0.28
MATR3-238	ENST00000512107	RNF148	Q8N7C7	305 aa		13.33	□□□□□ -0.28
MATR3-238	ENST00000512107	POGLUT1	Q8NBL1	392 aa		13.33	□□□□□ -0.28
MATR3-238	ENST00000512107	FAM156A	Q8NDB6	213 aa		13.33	□□□□□ -0.28
MATR3-238	ENST00000512107	OR8J3	Q8NGG0	315 aa		13.33	□□□□□ -0.28
MATR3-238	ENST00000512107	SAP130	Q9H0E3	1048 aa		13.33	□□□□□ -0.28
MATR3-238	ENST00000512107	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	13.33	□□□□□ -0.28	5e-8	■■■□□ 15.4
MATR3-238	ENST00000512107	A4GALT	Q9NPC4	353 aa		13.33	□□□□□ -0.28
MATR3-238	ENST00000512107	GID8	Q9NWU2	228 aa		13.33	□□□□□ -0.28
MATR3-238	ENST00000512107	TAS2R1	Q9NYW7	299 aa		13.33	□□□□□ -0.28
MATR3-238	ENST00000512107	TMEM181	Q9P2C4	612 aa		13.33	□□□□□ -0.28
MATR3-238	ENST00000512107	ABCD2	Q9UBJ2	740 aa		13.33	□□□□□ -0.28
MATR3-238	ENST00000512107	TUBD1	Q9UJT1	453 aa		13.33	□□□□□ -0.28
MATR3-238	ENST00000512107	NTNG1	Q9Y2I2	539 aa		13.33	□□□□□ -0.28
MATR3-238	ENST00000512107	BOD1L1	Q8NFC6	3051 aa		13.33	□□□□□ -0.28
MATR3-238	ENST00000512107	PRORSD1P	A6NEY8	169 aa		13.32	□□□□□ -0.28
MATR3-238	ENST00000512107	TMEM229A	B2RXF0	380 aa		13.32	□□□□□ -0.28
MATR3-238	ENST00000512107	SLC28A2	O43868	658 aa		13.32	□□□□□ -0.28
MATR3-238	ENST00000512107	KIAA0513	O60268	411 aa		13.32	□□□□□ -0.28
MATR3-238	ENST00000512107	NME2P1	O60361	137 aa		13.32	□□□□□ -0.28
MATR3-238	ENST00000512107	UGT2B17	O75795	530 aa		13.32	□□□□□ -0.28
MATR3-238	ENST00000512107	WISP1	O95388	367 aa		13.32	□□□□□ -0.28
MATR3-238	ENST00000512107	NPPA	P01160	153 aa		13.32	□□□□□ -0.28
MATR3-238	ENST00000512107	KRT16	P08779	473 aa		13.32	□□□□□ -0.28
MATR3-238	ENST00000512107	NAGA	P17050	411 aa		13.32	□□□□□ -0.28
MATR3-238	ENST00000512107	NME2	P22392	152 aa		13.32	□□□□□ -0.28
MATR3-238	ENST00000512107	CASP3	P42574	277 aa		13.32	□□□□□ -0.28
MATR3-238	ENST00000512107	GSK3B	P49841	420 aa		13.32	□□□□□ -0.28
MATR3-238	ENST00000512107	NRG3	P56975	720 aa		13.32	□□□□□ -0.28
MATR3-238	ENST00000512107	LIPE	Q05469	1076 aa		13.32	□□□□□ -0.28
MATR3-238	ENST00000512107	FADD	Q13158	208 aa		13.32	□□□□□ -0.28
MATR3-238	ENST00000512107	GPR68	Q15743	365 aa		13.32	□□□□□ -0.28
MATR3-238	ENST00000512107	CD226	Q15762	336 aa		13.32	□□□□□ -0.28
MATR3-238	ENST00000512107	GPAT3	Q53EU6	434 aa		13.32	□□□□□ -0.28
MATR3-238	ENST00000512107	ZNF766	Q5HY98	468 aa		13.32	□□□□□ -0.28
MATR3-238	ENST00000512107	AP1AR	Q63HQ0	302 aa		13.32	□□□□□ -0.28
MATR3-238	ENST00000512107	SLC25A25	Q6KCM7	469 aa		13.32	□□□□□ -0.28
MATR3-238	ENST00000512107	C16orf62	Q7Z3J2	963 aa		13.32	□□□□□ -0.28
MATR3-238	ENST00000512107	GALNTL5	Q7Z4T8	443 aa		13.32	□□□□□ -0.28
MATR3-238	ENST00000512107	MARCH3	Q86UD3	253 aa		13.32	□□□□□ -0.28
MATR3-238	ENST00000512107	DEFB107A	Q8IZN7	70 aa		13.32	□□□□□ -0.28
MATR3-238	ENST00000512107	ZADH2	Q8N4Q0	377 aa		13.32	□□□□□ -0.28
MATR3-238	ENST00000512107	GATS	Q8NAP1	163 aa		13.32	□□□□□ -0.28
MATR3-238	ENST00000512107	PSD4	Q8NDX1	1056 aa		13.32	□□□□□ -0.28
MATR3-238	ENST00000512107	TAAR6	Q96RI8	345 aa		13.32	□□□□□ -0.28
MATR3-238	ENST00000512107	SLC25A18	Q9H1K4	315 aa		13.32	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms