RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 ALDOAP04075 364 aaKnown RBP16.93■□□□□ 0.3
HMGCS1-206ENST00000511774 ZNF16P17020 682 aaPredicted RBP16.93■□□□□ 0.3
HMGCS1-206ENST00000511774 ALDH9A1P49189 494 aa16.93■□□□□ 0.3
HMGCS1-206ENST00000511774 CASP9P55211 416 aa16.93■□□□□ 0.3
HMGCS1-206ENST00000511774 PSG6Q00889 435 aa16.93■□□□□ 0.3
HMGCS1-206ENST00000511774 ILF2Q12905 390 aaKnown RBP16.93■□□□□ 0.3
HMGCS1-206ENST00000511774 TRAF3Q13114 568 aa16.93■□□□□ 0.3
HMGCS1-206ENST00000511774 GANABQ14697 944 aaKnown RBP16.93■□□□□ 0.3
HMGCS1-206ENST00000511774 SGO1Q5FBB7 561 aa16.93■□□□□ 0.3
HMGCS1-206ENST00000511774 PAGE2Q7Z2X7 111 aa16.93■□□□□ 0.3
HMGCS1-206ENST00000511774 TBC1D1Q86TI0 1168 aaPredicted RBP16.93■□□□□ 0.3
HMGCS1-206ENST00000511774 MARCH3Q86UD3 253 aa16.93■□□□□ 0.3
HMGCS1-206ENST00000511774 DTX2Q86UW9 622 aa16.93■□□□□ 0.3
HMGCS1-206ENST00000511774 GABRG1Q8N1C3 465 aa16.93■□□□□ 0.3
HMGCS1-206ENST00000511774 SLC35F6Q8N357 371 aa16.93■□□□□ 0.3
HMGCS1-206ENST00000511774 TRPC4APQ8TEL6 797 aa16.93■□□□□ 0.3
HMGCS1-206ENST00000511774 ROBO4Q8WZ75 1007 aa16.93■□□□□ 0.3
HMGCS1-206ENST00000511774 HTRA1Q92743 480 aa16.93■□□□□ 0.3
HMGCS1-206ENST00000511774 RHNO1Q9BSD3 238 aa16.93■□□□□ 0.3
HMGCS1-206ENST00000511774 PRRG4Q9BZD6 226 aa16.93■□□□□ 0.3
HMGCS1-206ENST00000511774 LINC01387J3KSC0 135 aa16.92■□□□□ 0.3
HMGCS1-206ENST00000511774 CXCL13O43927 109 aa16.92■□□□□ 0.3
HMGCS1-206ENST00000511774 AGTR1P30556 359 aa16.92■□□□□ 0.3
HMGCS1-206ENST00000511774 KRT20P35900 424 aa16.92■□□□□ 0.3
HMGCS1-206ENST00000511774 IRX1P78414 480 aaPredicted RBP16.92■□□□□ 0.3
HMGCS1-206ENST00000511774 DR1Q01658 176 aa16.92■□□□□ 0.3
HMGCS1-206ENST00000511774 RUNX1T1Q06455 604 aa16.92■□□□□ 0.3
HMGCS1-206ENST00000511774 APOOLQ6UXV4 268 aa16.92■□□□□ 0.3
HMGCS1-206ENST00000511774 GALNT10Q86SR1 603 aa16.92■□□□□ 0.3
HMGCS1-206ENST00000511774 OR7G2Q8NG99 324 aa16.92■□□□□ 0.3
HMGCS1-206ENST00000511774 RHEBL1Q8TAI7 183 aa16.92■□□□□ 0.3
HMGCS1-206ENST00000511774 GPR78Q96P69 363 aa16.92■□□□□ 0.3
HMGCS1-206ENST00000511774 KLHDC3Q9BQ90 382 aa16.92■□□□□ 0.3
HMGCS1-206ENST00000511774 LRTM1Q9HBL6 345 aa16.92■□□□□ 0.3
HMGCS1-206ENST00000511774 FBXO34Q9NWN3 711 aa16.92■□□□□ 0.3
HMGCS1-206ENST00000511774 TXNDC16Q9P2K2 825 aa16.92■□□□□ 0.3
HMGCS1-206ENST00000511774 UTS2RQ9UKP6 389 aa16.92■□□□□ 0.3
HMGCS1-206ENST00000511774 SNX12Q9UMY4 172 aa16.92■□□□□ 0.3
HMGCS1-206ENST00000511774 SLC12A4Q9UP95 1085 aa16.92■□□□□ 0.3
HMGCS1-206ENST00000511774 UQCRHLA0A096LP55 91 aa16.91■□□□□ 0.3
HMGCS1-206ENST00000511774 SYCE1LA8MT33 242 aa16.91■□□□□ 0.3
HMGCS1-206ENST00000511774 SHISA9B4DS77 424 aa16.91■□□□□ 0.3
HMGCS1-206ENST00000511774 IGHV4-31P0DP07 118 aa16.91■□□□□ 0.3
HMGCS1-206ENST00000511774 IGFBP5P24593 272 aa16.91■□□□□ 0.3
HMGCS1-206ENST00000511774 ADH6P28332 368 aa16.91■□□□□ 0.3
HMGCS1-206ENST00000511774 SPRP35270 261 aaPredicted RBP16.91■□□□□ 0.3
HMGCS1-206ENST00000511774 THBS2P35442 1172 aa16.91■□□□□ 0.3
HMGCS1-206ENST00000511774 C21orf58P58505 322 aa16.91■□□□□ 0.3
HMGCS1-206ENST00000511774 LOXL1Q08397 574 aaPredicted RBP16.91■□□□□ 0.3
HMGCS1-206ENST00000511774 RPS27LQ71UM5 84 aaKnown RBP16.91■□□□□ 0.3
HMGCS1-206ENST00000511774 NUFIP2Q7Z417 695 aaKnown RBP16.91■□□□□ 0.3
HMGCS1-206ENST00000511774 STEAP2Q8NFT2 490 aa16.91■□□□□ 0.3
HMGCS1-206ENST00000511774 PYROXD1Q8WU10 500 aa16.91■□□□□ 0.3
HMGCS1-206ENST00000511774 CDKL2Q92772 493 aa16.91■□□□□ 0.3
HMGCS1-206ENST00000511774 ESRP2Q9H6T0 727 aaKnown RBP16.91■□□□□ 0.3
HMGCS1-206ENST00000511774 BARX1Q9HBU1 254 aaPredicted RBP16.91■□□□□ 0.3
HMGCS1-206ENST00000511774 AHSPQ9NZD4 102 aa16.91■□□□□ 0.3
HMGCS1-206ENST00000511774 CPSF2Q9P2I0 782 aaKnown RBP16.91■□□□□ 0.3
HMGCS1-206ENST00000511774 SNX24Q9Y343 169 aa16.91■□□□□ 0.3
HMGCS1-206ENST00000511774 ZNF780BQ9Y6R6 833 aa16.91■□□□□ 0.3
HMGCS1-206ENST00000511774 DYSFO75923 2080 aa16.9■□□□□ 0.3
HMGCS1-206ENST00000511774 SLC35F4A4IF30 521 aa16.9■□□□□ 0.3
HMGCS1-206ENST00000511774 MRPS25P82663 173 aaKnown RBP16.9■□□□□ 0.3
HMGCS1-206ENST00000511774 PRSS53Q2L4Q9 553 aa16.9■□□□□ 0.3
HMGCS1-206ENST00000511774 GLYR1Q49A26 553 aaPredicted RBP16.9■□□□□ 0.3
HMGCS1-206ENST00000511774 SH2D4BQ5SQS7 431 aa16.9■□□□□ 0.3
HMGCS1-206ENST00000511774 GRTP1Q5TC63 336 aa16.9■□□□□ 0.3
HMGCS1-206ENST00000511774 TFAP2EQ6VUC0 442 aa16.9■□□□□ 0.3
HMGCS1-206ENST00000511774 CTAGE3PQ8IX95 158 aa16.9■□□□□ 0.3
HMGCS1-206ENST00000511774 C1orf52Q8N6N3 182 aaKnown RBP16.9■□□□□ 0.3
HMGCS1-206ENST00000511774 PIWIL2Q8TC59 973 aaKnown RBP16.9■□□□□ 0.3
HMGCS1-206ENST00000511774 GRIP2Q9C0E4 1043 aa16.9■□□□□ 0.3
HMGCS1-206ENST00000511774 SHARPINQ9H0F6 387 aa16.9■□□□□ 0.3
HMGCS1-206ENST00000511774 MANSC1Q9H8J5 431 aa16.9■□□□□ 0.3
HMGCS1-206ENST00000511774 CISD1Q9NZ45 108 aaKnown RBP16.9■□□□□ 0.3
HMGCS1-206ENST00000511774 XPR1Q9UBH6 696 aa16.9■□□□□ 0.3
HMGCS1-206ENST00000511774 PSME2Q9UL46 239 aa16.9■□□□□ 0.3
HMGCS1-206ENST00000511774 VDAC3Q9Y277 283 aa16.9■□□□□ 0.3
HMGCS1-206ENST00000511774 OR10H1Q9Y4A9 318 aa16.9■□□□□ 0.3
HMGCS1-206ENST00000511774 TGP01266 2768 aa16.89■□□□□ 0.3
HMGCS1-206ENST00000511774 IGLV3-32A0A0A0MS00 114 aa16.89■□□□□ 0.29
HMGCS1-206ENST00000511774 A0A0J9YW62 118 aa16.89■□□□□ 0.29
HMGCS1-206ENST00000511774 HMX2A2RU54 273 aa16.89■□□□□ 0.29
HMGCS1-206ENST00000511774 ELOA3DA6NLF2 546 aaPredicted RBP16.89■□□□□ 0.29
HMGCS1-206ENST00000511774 PPP6CO00743 305 aa16.89■□□□□ 0.29
HMGCS1-206ENST00000511774 TNFSF11O14788 317 aa16.89■□□□□ 0.29
HMGCS1-206ENST00000511774 GUCY1B2O75343 617 aa16.89■□□□□ 0.29
HMGCS1-206ENST00000511774 BCAS2O75934 225 aaPredicted RBP16.89■□□□□ 0.29
HMGCS1-206ENST00000511774 PDYNP01213 254 aa16.89■□□□□ 0.29
HMGCS1-206ENST00000511774 CRABP2P29373 138 aa16.89■□□□□ 0.29
HMGCS1-206ENST00000511774 ARL1P40616 181 aaPredicted RBP16.89■□□□□ 0.29
HMGCS1-206ENST00000511774 CCNG1P51959 295 aa16.89■□□□□ 0.29
HMGCS1-206ENST00000511774 ELOA3BQ3SY89 546 aa16.89■□□□□ 0.29
HMGCS1-206ENST00000511774 SFRP5Q5T4F7 317 aa16.89■□□□□ 0.29
HMGCS1-206ENST00000511774 C11orf71Q6IPW1 123 aa16.89■□□□□ 0.29
HMGCS1-206ENST00000511774 LRRC8AQ8IWT6 810 aa16.89■□□□□ 0.29
HMGCS1-206ENST00000511774 ZNF525Q8N782 197 aa16.89■□□□□ 0.29
HMGCS1-206ENST00000511774 PPM1NQ8N819 430 aa16.89■□□□□ 0.29
HMGCS1-206ENST00000511774 ELOA3Q8NG57 546 aa16.89■□□□□ 0.29
HMGCS1-206ENST00000511774 EXOSC8Q96B26 276 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms