RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 BRF2Q9HAW0 419 aa5.52□□□□□ -1.53
USP53-206ENST00000510737 ZNF160Q9HCG1 818 aa5.52□□□□□ -1.53
USP53-206ENST00000510737 FAM60AQ9NP50 221 aa5.52□□□□□ -1.53
USP53-206ENST00000510737 UBE2TQ9NPD8 197 aaPredicted RBP5.52□□□□□ -1.53
USP53-206ENST00000510737 TLN2Q9Y4G6 2542 aa5.52□□□□□ -1.53
USP53-206ENST00000510737 CCDC88CQ9P219 2028 aa5.52□□□□□ -1.53
USP53-206ENST00000510737 SPTBP11277 2137 aa5.51□□□□□ -1.53
USP53-206ENST00000510737 GTF3C1Q12789 2109 aa5.51□□□□□ -1.53
USP53-206ENST00000510737 HS3ST1O14792 307 aa5.51□□□□□ -1.53
USP53-206ENST00000510737 KMOO15229 486 aa5.51□□□□□ -1.53
USP53-206ENST00000510737 PGLSO95336 258 aa5.51□□□□□ -1.53
USP53-206ENST00000510737 IGHV4-38-2P0DP08 117 aa5.51□□□□□ -1.53
USP53-206ENST00000510737 CDH3P22223 829 aa5.51□□□□□ -1.53
USP53-206ENST00000510737 PRDX3P30048 256 aaKnown RBP5.51□□□□□ -1.53
USP53-206ENST00000510737 GABRA4P48169 554 aa5.51□□□□□ -1.53
USP53-206ENST00000510737 ARSEP51690 589 aa5.51□□□□□ -1.53
USP53-206ENST00000510737 IHHQ14623 411 aa5.51□□□□□ -1.53
USP53-206ENST00000510737 STK38Q15208 465 aa5.51□□□□□ -1.53
USP53-206ENST00000510737 CAMK4Q16566 473 aa5.51□□□□□ -1.53
USP53-206ENST00000510737 CDO1Q16878 200 aa5.51□□□□□ -1.53
USP53-206ENST00000510737 FFAR4Q5NUL3 377 aa5.51□□□□□ -1.53
USP53-206ENST00000510737 HENMT1Q5T8I9 393 aaKnown RBP5.51□□□□□ -1.53
USP53-206ENST00000510737 LCE3AQ5TA76 89 aa5.51□□□□□ -1.53
USP53-206ENST00000510737 OOSP2Q86WS3 158 aa5.51□□□□□ -1.53
USP53-206ENST00000510737 OXNAD1Q96HP4 312 aaPredicted RBP5.51□□□□□ -1.53
USP53-206ENST00000510737 NRTNQ99748 197 aa5.51□□□□□ -1.53
USP53-206ENST00000510737 TIMM29Q9BSF4 260 aa5.51□□□□□ -1.53
USP53-206ENST00000510737 HES7Q9BYE0 225 aa5.51□□□□□ -1.53
USP53-206ENST00000510737 SEPT11Q9NVA2 429 aaKnown RBP5.51□□□□□ -1.53
USP53-206ENST00000510737 INTS10Q9NVR2 710 aaKnown RBP5.51□□□□□ -1.53
USP53-206ENST00000510737 ARMCX3Q9UH62 379 aaPredicted RBP5.51□□□□□ -1.53
USP53-206ENST00000510737 NOCTQ9UK39 431 aaKnown RBP5.51□□□□□ -1.53
USP53-206ENST00000510737 PSMD13Q9UNM6 376 aa5.51□□□□□ -1.53
USP53-206ENST00000510737 AP1M2Q9Y6Q5 423 aa5.51□□□□□ -1.53
USP53-206ENST00000510737 BIRC6Q9NR09 4857 aa5.5□□□□□ -1.53
USP53-206ENST00000510737 OR5H15A6NDH6 313 aa5.5□□□□□ -1.53
USP53-206ENST00000510737 IDSB3KWA1 339 aa5.5□□□□□ -1.53
USP53-206ENST00000510737 GOLGA8SH3BPF8 625 aa5.5□□□□□ -1.53
USP53-206ENST00000510737 CLDN4O14493 209 aa5.5□□□□□ -1.53
USP53-206ENST00000510737 VEGFDO43915 354 aa5.5□□□□□ -1.53
USP53-206ENST00000510737 MTX2O75431 263 aa5.5□□□□□ -1.53
USP53-206ENST00000510737 OR2B3O76000 313 aa5.5□□□□□ -1.53
USP53-206ENST00000510737 ZFAND5O76080 213 aa5.5□□□□□ -1.53
USP53-206ENST00000510737 SLC25A14O95258 325 aaPredicted RBP5.5□□□□□ -1.53
USP53-206ENST00000510737 HPP00738 406 aa5.5□□□□□ -1.53
USP53-206ENST00000510737 SPINT3P49223 89 aa5.5□□□□□ -1.53
USP53-206ENST00000510737 SNX16P57768 344 aa5.5□□□□□ -1.53
USP53-206ENST00000510737 TBX2Q13207 712 aaPredicted RBP5.5□□□□□ -1.53
USP53-206ENST00000510737 MAD2L1Q13257 205 aaPredicted RBP5.5□□□□□ -1.53
USP53-206ENST00000510737 RFTN1Q14699 578 aaPredicted RBP5.5□□□□□ -1.53
USP53-206ENST00000510737 PRICKLE4Q2TBC4 344 aa5.5□□□□□ -1.53
USP53-206ENST00000510737 CXorf66Q5JRM2 361 aaPredicted RBP5.5□□□□□ -1.53
USP53-206ENST00000510737 TMEM211Q6ICI0 200 aa5.5□□□□□ -1.53
USP53-206ENST00000510737 COX15Q7KZN9 410 aa5.5□□□□□ -1.53
USP53-206ENST00000510737 LRRTM4Q86VH4 590 aa5.5□□□□□ -1.53
USP53-206ENST00000510737 HIPK1Q86Z02 1210 aa5.5□□□□□ -1.53
USP53-206ENST00000510737 CEP57L1Q8IYX8 460 aa5.5□□□□□ -1.53
USP53-206ENST00000510737 MYRIPQ8NFW9 859 aa5.5□□□□□ -1.53
USP53-206ENST00000510737 OR4E2Q8NGC2 313 aa5.5□□□□□ -1.53
USP53-206ENST00000510737 OR14L1PQ8NHC6 308 aa5.5□□□□□ -1.53
USP53-206ENST00000510737 FAM57AQ8TBR7 257 aa5.5□□□□□ -1.53
USP53-206ENST00000510737 CCDC110Q8TBZ0 833 aa5.5□□□□□ -1.53
USP53-206ENST00000510737 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.5□□□□□ -1.53
USP53-206ENST00000510737 RXFP2Q8WXD0 754 aa5.5□□□□□ -1.53
USP53-206ENST00000510737 C8orf44Q96CB5 159 aa5.5□□□□□ -1.53
USP53-206ENST00000510737 SIGLEC12Q96PQ1 595 aa5.5□□□□□ -1.53
USP53-206ENST00000510737 NUDCD1Q96RS6 583 aa5.5□□□□□ -1.53
USP53-206ENST00000510737 C19orf24Q9BVV8 132 aa5.5□□□□□ -1.53
USP53-206ENST00000510737 SIX2Q9NPC8 291 aa5.5□□□□□ -1.53
USP53-206ENST00000510737 POMT2Q9UKY4 750 aa5.5□□□□□ -1.53
USP53-206ENST00000510737 SEC16AO15027 2179 aa5.5□□□□□ -1.53
USP53-206ENST00000510737 INTS1Q8N201 2190 aaKnown RBP5.49□□□□□ -1.53
USP53-206ENST00000510737 NBEAL2Q6ZNJ1 2754 aa5.49□□□□□ -1.53
USP53-206ENST00000510737 CHD3Q12873 2000 aaKnown RBP5.49□□□□□ -1.53
USP53-206ENST00000510737 PCM1Q15154 2024 aa5.49□□□□□ -1.53
USP53-206ENST00000510737 A0A0J9YYE9 177 aa5.49□□□□□ -1.53
USP53-206ENST00000510737 A0A1B0GTH9 108 aa5.49□□□□□ -1.53
USP53-206ENST00000510737 VSTM2BA6NLU5 285 aa5.49□□□□□ -1.53
USP53-206ENST00000510737 GPR89AB7ZAQ6 455 aa5.49□□□□□ -1.53
USP53-206ENST00000510737 BTN3A3O00478 584 aa5.49□□□□□ -1.53
USP53-206ENST00000510737 TTI1O43156 1089 aa5.49□□□□□ -1.53
USP53-206ENST00000510737 PIP5K1CO60331 668 aa5.49□□□□□ -1.53
USP53-206ENST00000510737 BMP10O95393 424 aa5.49□□□□□ -1.53
USP53-206ENST00000510737 TRBC1P01850 177 aa5.49□□□□□ -1.53
USP53-206ENST00000510737 SERPINA7P05543 415 aa5.49□□□□□ -1.53
USP53-206ENST00000510737 GPR89BP0CG08 455 aa5.49□□□□□ -1.53
USP53-206ENST00000510737 IL7RP16871 459 aa5.49□□□□□ -1.53
USP53-206ENST00000510737 HALP42357 657 aa5.49□□□□□ -1.53
USP53-206ENST00000510737 NUP107P57740 925 aa5.49□□□□□ -1.53
USP53-206ENST00000510737 MAXP61244 160 aa5.49□□□□□ -1.53
USP53-206ENST00000510737 IL10RBQ08334 325 aa5.49□□□□□ -1.53
USP53-206ENST00000510737 GALNT2Q10471 571 aa5.49□□□□□ -1.53
USP53-206ENST00000510737 ZIC1Q15915 447 aa5.49□□□□□ -1.53
USP53-206ENST00000510737 RBBP7Q16576 425 aa5.49□□□□□ -1.53
USP53-206ENST00000510737 DEFB110Q30KQ9 67 aa5.49□□□□□ -1.53
USP53-206ENST00000510737 ADAMTSL4-AS1Q5T5F5 129 aa5.49□□□□□ -1.53
USP53-206ENST00000510737 ARMC12Q5T9G4 340 aa5.49□□□□□ -1.53
USP53-206ENST00000510737 RESP18Q5W5W9 173 aa5.49□□□□□ -1.53
USP53-206ENST00000510737 TXNRD3NBQ6F5E7 133 aa5.49□□□□□ -1.53
USP53-206ENST00000510737 ARCQ7LC44 396 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms