RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 ZNF585AQ6P3V2 769 aa12.35□□□□□ -0.43
SNF8-206ENST00000509989 EPGNQ6UW88 154 aa12.35□□□□□ -0.43
SNF8-206ENST00000509989 SEM1Q6ZVN7 128 aa12.35□□□□□ -0.43
SNF8-206ENST00000509989 MRGPRGQ86SM5 289 aa12.35□□□□□ -0.43
SNF8-206ENST00000509989 TRIM42Q8IWZ5 723 aa12.35□□□□□ -0.43
SNF8-206ENST00000509989 GATSQ8NAP1 163 aa12.35□□□□□ -0.43
SNF8-206ENST00000509989 OR5M1Q8NGP8 315 aa12.35□□□□□ -0.43
SNF8-206ENST00000509989 OR4C3Q8NH37 302 aa12.35□□□□□ -0.43
SNF8-206ENST00000509989 NEIL3Q8TAT5 605 aa12.35□□□□□ -0.43
SNF8-206ENST00000509989 PIWIL2Q8TC59 973 aaKnown RBP12.35□□□□□ -0.43
SNF8-206ENST00000509989 JADE3Q92613 823 aa12.35□□□□□ -0.43
SNF8-206ENST00000509989 ARSGQ96EG1 525 aa12.35□□□□□ -0.43
SNF8-206ENST00000509989 EXO5Q9H790 373 aa12.35□□□□□ -0.43
SNF8-206ENST00000509989 Q9N2J8 555 aa12.35□□□□□ -0.43
SNF8-206ENST00000509989 ACKR4Q9NPB9 350 aa12.35□□□□□ -0.43
SNF8-206ENST00000509989 GIN1Q9NXP7 522 aa12.35□□□□□ -0.43
SNF8-206ENST00000509989 MED11Q9P086 117 aa12.35□□□□□ -0.43
SNF8-206ENST00000509989 CENPVL1A0A0U1RR11 272 aa12.34□□□□□ -0.43
SNF8-206ENST00000509989 HMGB1P1B2RPK0 211 aaPredicted RBP12.34□□□□□ -0.43
SNF8-206ENST00000509989 SHISA8B8ZZ34 492 aa12.34□□□□□ -0.43
SNF8-206ENST00000509989 PRRG2O14669 202 aa12.34□□□□□ -0.43
SNF8-206ENST00000509989 SUSD5O60279 629 aa12.34□□□□□ -0.43
SNF8-206ENST00000509989 DIAPH2O60879 1101 aa12.34□□□□□ -0.43
SNF8-206ENST00000509989 GSNP06396 782 aa12.34□□□□□ -0.43
SNF8-206ENST00000509989 ESRRAP11474 423 aaPredicted RBP12.34□□□□□ -0.43
SNF8-206ENST00000509989 BMP7P18075 431 aa12.34□□□□□ -0.43
SNF8-206ENST00000509989 KRT20P35900 424 aa12.34□□□□□ -0.43
SNF8-206ENST00000509989 RPL3P39023 403 aaKnown RBP12.34□□□□□ -0.43
SNF8-206ENST00000509989 STARP49675 285 aa12.34□□□□□ -0.43
SNF8-206ENST00000509989 IDH3AP50213 366 aa12.34□□□□□ -0.43
SNF8-206ENST00000509989 EFR3AQ14156 821 aa12.34□□□□□ -0.43
SNF8-206ENST00000509989 DECR1Q16698 335 aa12.34□□□□□ -0.43
SNF8-206ENST00000509989 CCDC71Q8IV32 467 aaPredicted RBP12.34□□□□□ -0.43
SNF8-206ENST00000509989 CDRT4Q8N9R6 151 aa12.34□□□□□ -0.43
SNF8-206ENST00000509989 OR8J2Q8NGG1 315 aa12.34□□□□□ -0.43
SNF8-206ENST00000509989 OR4A15Q8NGL6 344 aa12.34□□□□□ -0.43
SNF8-206ENST00000509989 CEP70Q8NHQ1 597 aa12.34□□□□□ -0.43
SNF8-206ENST00000509989 LRRC8CQ8TDW0 803 aa12.34□□□□□ -0.43
SNF8-206ENST00000509989 CKAP2Q8WWK9 683 aa12.34□□□□□ -0.43
SNF8-206ENST00000509989 ZNF524Q96C55 264 aa12.34□□□□□ -0.43
SNF8-206ENST00000509989 TMCO6Q96DC7 493 aa12.34□□□□□ -0.43
SNF8-206ENST00000509989 C7orf26Q96N11 449 aa12.34□□□□□ -0.43
SNF8-206ENST00000509989 OR7D2Q96RA2 312 aa12.34□□□□□ -0.43
SNF8-206ENST00000509989 TIMP4Q99727 224 aa12.34□□□□□ -0.43
SNF8-206ENST00000509989 UGT2B28Q9BY64 529 aa12.34□□□□□ -0.43
SNF8-206ENST00000509989 DSN1Q9H410 356 aa12.34□□□□□ -0.43
SNF8-206ENST00000509989 C3orf14Q9HBI5 128 aa12.34□□□□□ -0.43
SNF8-206ENST00000509989 ATAD3AQ9NVI7 634 aa12.34□□□□□ -0.43
SNF8-206ENST00000509989 ALKBH4Q9NXW9 302 aa12.34□□□□□ -0.43
SNF8-206ENST00000509989 INTS1Q8N201 2190 aaKnown RBP12.34□□□□□ -0.43
SNF8-206ENST00000509989 CENPEQ02224 2701 aa12.34□□□□□ -0.43
SNF8-206ENST00000509989 CELSR2Q9HCU4 2923 aa12.33□□□□□ -0.44
SNF8-206ENST00000509989 C15orf38-AP3S2A0A0A6YYH1 394 aa12.33□□□□□ -0.44
SNF8-206ENST00000509989 PRAMEF27A3QJZ7 478 aa12.33□□□□□ -0.44
SNF8-206ENST00000509989 TRPC5OSA6NMA1 111 aa12.33□□□□□ -0.44
SNF8-206ENST00000509989 E9PLN8 166 aa12.33□□□□□ -0.44
SNF8-206ENST00000509989 ZIC3O60481 467 aa12.33□□□□□ -0.44
SNF8-206ENST00000509989 HCN1O60741 890 aa12.33□□□□□ -0.44
SNF8-206ENST00000509989 OXSR1O95747 527 aaPredicted RBP12.33□□□□□ -0.44
SNF8-206ENST00000509989 ALOX5P09917 674 aa12.33□□□□□ -0.44
SNF8-206ENST00000509989 GP1BBP13224 206 aa12.33□□□□□ -0.44
SNF8-206ENST00000509989 ADH7P40394 386 aa12.33□□□□□ -0.44
SNF8-206ENST00000509989 KIR3DL1P43629 444 aa12.33□□□□□ -0.44
SNF8-206ENST00000509989 B3GALT5-AS1P59052 145 aa12.33□□□□□ -0.44
SNF8-206ENST00000509989 RPP38P78345 283 aaKnown RBP12.33□□□□□ -0.44
SNF8-206ENST00000509989 SNTA1Q13424 505 aa12.33□□□□□ -0.44
SNF8-206ENST00000509989 ZNHIT3Q15649 155 aaPredicted RBP12.33□□□□□ -0.44
SNF8-206ENST00000509989 NDUFAF6Q330K2 333 aa12.33□□□□□ -0.44
SNF8-206ENST00000509989 SPDYE7PQ495Y7 208 aa12.33□□□□□ -0.44
SNF8-206ENST00000509989 GTDC1Q4AE62 458 aa12.33□□□□□ -0.44
SNF8-206ENST00000509989 CDC73Q6P1J9 531 aa12.33□□□□□ -0.44
SNF8-206ENST00000509989 PAOXQ6QHF9 649 aa12.33□□□□□ -0.44
SNF8-206ENST00000509989 MAMDC2Q7Z304 686 aaPredicted RBP12.33□□□□□ -0.44
SNF8-206ENST00000509989 C6orf120Q7Z4R8 191 aa12.33□□□□□ -0.44
SNF8-206ENST00000509989 SPATA19Q7Z5L4 167 aa12.33□□□□□ -0.44
SNF8-206ENST00000509989 HMGN2P46Q86SG4 172 aa12.33□□□□□ -0.44
SNF8-206ENST00000509989 PLCZ1Q86YW0 608 aa12.33□□□□□ -0.44
SNF8-206ENST00000509989 HOMEZQ8IX15 550 aa12.33□□□□□ -0.44
SNF8-206ENST00000509989 OR2M3Q8NG83 312 aa12.33□□□□□ -0.44
SNF8-206ENST00000509989 RFWD2Q8NHY2 731 aa12.33□□□□□ -0.44
SNF8-206ENST00000509989 ACTRT2Q8TDY3 377 aa12.33□□□□□ -0.44
SNF8-206ENST00000509989 DUSP19Q8WTR2 217 aa12.33□□□□□ -0.44
SNF8-206ENST00000509989 TESCQ96BS2 214 aa12.33□□□□□ -0.44
SNF8-206ENST00000509989 CHMP6Q96FZ7 201 aa12.33□□□□□ -0.44
SNF8-206ENST00000509989 PRPF18Q99633 342 aaKnown RBP12.33□□□□□ -0.44
SNF8-206ENST00000509989 VKORC1Q9BQB6 163 aa12.33□□□□□ -0.44
SNF8-206ENST00000509989 INTS9Q9NV88 658 aaKnown RBP12.33□□□□□ -0.44
SNF8-206ENST00000509989 QPCTLQ9NXS2 382 aa12.33□□□□□ -0.44
SNF8-206ENST00000509989 KCNE5Q9UJ90 142 aa12.33□□□□□ -0.44
SNF8-206ENST00000509989 ACAD8Q9UKU7 415 aa12.33□□□□□ -0.44
SNF8-206ENST00000509989 RPH3AQ9Y2J0 694 aaPredicted RBP12.33□□□□□ -0.44
SNF8-206ENST00000509989 UQCRHLA0A096LP55 91 aa12.32□□□□□ -0.44
SNF8-206ENST00000509989 RNF103-CHMP3A0A140T963 221 aa12.32□□□□□ -0.44
SNF8-206ENST00000509989 E9PBE3 544 aa12.32□□□□□ -0.44
SNF8-206ENST00000509989 RNASET2O00584 256 aaKnown RBP12.32□□□□□ -0.44
SNF8-206ENST00000509989 TOXO94900 526 aa12.32□□□□□ -0.44
SNF8-206ENST00000509989 ANGPTL1O95841 491 aa12.32□□□□□ -0.44
SNF8-206ENST00000509989 GLI4P10075 376 aa12.32□□□□□ -0.44
SNF8-206ENST00000509989 CASP6P55212 293 aa12.32□□□□□ -0.44
SNF8-206ENST00000509989 POU6F2P78424 691 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms