RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 YIPF4Q9BSR8 244 aa8□□□□□ -1.13
PDLIM5-213ENST00000509357 LMF2Q9BU23 707 aaKnown RBP8□□□□□ -1.13
PDLIM5-213ENST00000509357 TRIM8Q9BZR9 551 aa8□□□□□ -1.13
PDLIM5-213ENST00000509357 PAIP1Q9H074 479 aaKnown RBP8□□□□□ -1.13
PDLIM5-213ENST00000509357 IKZF5Q9H5V7 419 aa8□□□□□ -1.13
PDLIM5-213ENST00000509357 SAR1AQ9NR31 198 aa8□□□□□ -1.13
PDLIM5-213ENST00000509357 PLSCR2Q9NRY7 297 aa8□□□□□ -1.13
PDLIM5-213ENST00000509357 PNPLA3Q9NST1 481 aa8□□□□□ -1.13
PDLIM5-213ENST00000509357 KLRF1Q9NZS2 232 aa8□□□□□ -1.13
PDLIM5-213ENST00000509357 CCDC167Q9P0B6 97 aa8□□□□□ -1.13
PDLIM5-213ENST00000509357 KLHL14Q9P2G3 628 aa8□□□□□ -1.13
PDLIM5-213ENST00000509357 TNFRSF10DQ9UBN6 386 aa8□□□□□ -1.13
PDLIM5-213ENST00000509357 CNOT11Q9UKZ1 510 aaKnown RBP8□□□□□ -1.13
PDLIM5-213ENST00000509357 OR10H1Q9Y4A9 318 aa8□□□□□ -1.13
PDLIM5-213ENST00000509357 LIPGQ9Y5X9 500 aa8□□□□□ -1.13
PDLIM5-213ENST00000509357 CHCHD2Q9Y6H1 151 aaPredicted RBP8□□□□□ -1.13
PDLIM5-213ENST00000509357 CENPEQ02224 2701 aa8□□□□□ -1.13
PDLIM5-213ENST00000509357 UNC79Q9P2D8 2635 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 NBPF19A0A087WUL8 3843 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 C15orf38-AP3S2A0A0A6YYH1 394 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 CENPVL1A0A0U1RR11 272 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 ANKRD33BA6NCL7 494 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 AQP7O14520 342 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 GNB5O14775 395 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 TO15178 435 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 SUSD5O60279 629 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 TSPAN2O60636 221 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 HCN1O60741 890 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 UGT2B11O75310 529 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 PPM1BO75688 479 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 IGHG3P01860 377 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 HMGN2P05204 90 aaKnown RBP7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 IFI6P09912 130 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 RFPL3SP0C7P2 107 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 NAGAP17050 411 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 DRD5P21918 477 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 ACVR2AP27037 513 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 IL12BP29460 328 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 GCKP35557 465 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 KIR3DL1P43629 444 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 PPICP45877 212 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 ATP4BP51164 291 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 POLR2JP52435 117 aaKnown RBP7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 ARFIP2P53365 341 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 PLAURQ03405 335 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 ZNF155Q12901 538 aaPredicted RBP7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 SELPLGQ14242 412 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 SQLEQ14534 574 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 HYAL4Q2M3T9 481 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 VPS26BQ4G0F5 336 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 FNDC7Q5VTL7 733 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 MFSD12Q6NUT3 480 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 ANGPTL8Q6UXH0 198 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 NUP54Q7Z3B4 507 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 R3HCC1LQ7Z5L2 792 aaKnown RBP7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 PIGWQ7Z7B1 504 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 MIER2Q8N344 545 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 NUP43Q8NFH3 380 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 ASB5Q8WWX0 329 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 ZNF524Q96C55 264 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 TMCO6Q96DC7 493 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 ERP27Q96DN0 273 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 HSPBAP1Q96EW2 488 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 ZBED6CLQ96FA7 236 aaPredicted RBP7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 SLC35A4Q96G79 324 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 GNRHR2Q96P88 292 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 NODALQ96S42 347 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 DMRTA2Q96SC8 542 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 CCDC106Q9BWC9 280 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 FAM107BQ9H098 131 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 MYLK2Q9H1R3 596 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 SLC6A15Q9H2J7 730 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 ZNF703Q9H7S9 590 aaPredicted RBP7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 EQTNQ9NQ60 294 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 TAS2R9Q9NYW1 312 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 ARMCX1Q9P291 453 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 BTNL2Q9UIR0 455 aa7.99□□□□□ -1.13
PDLIM5-213ENST00000509357 A0A1B0GVC2 190 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 PRSS51A0A1B0GVH4 220 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 FAM234BA2RU67 622 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 GMNCA6NCL1 334 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 C2orf72A6NCS6 295 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 FRG2CA6NGY1 282 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 LRRC3CA6NJW4 275 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 FAM90A27PA6NNH2 459 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 FXYD1O00168 92 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 NR5A2O00482 541 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 EMC8O43402 210 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 COQ9O75208 318 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 ERN1O75460 977 aaKnown RBP7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 NKX2-2O95096 273 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 CPSF4O95639 269 aaKnown RBP7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 NCF2P19878 526 aaPredicted RBP7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 S100A3P33764 101 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 GPC1P35052 558 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 CASP3P42574 277 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 CLNS1AP54105 237 aaKnown RBP7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 PRKAG1P54619 331 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 GAS1P54826 345 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 KLF10Q13118 480 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms