RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 PDSS1Q5T2R2 415 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 MROH9Q5TGP6 573 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 DUPD1Q68J44 220 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 OR5M10Q6IEU7 315 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 C11orf71Q6IPW1 123 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 ZNF793Q6ZN11 406 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 Q6ZSR9 355 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 ATG4DQ86TL0 474 aaPredicted RBP3.4□□□□□ -1.87
RNF4-211ENST00000509206 KRT78Q8N1N4 520 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 ANKS4BQ8N8V4 417 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 ZDHHC22Q8N966 263 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 WDSUB1Q8N9V3 476 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 SRFBP1Q8NEF9 429 aaKnown RBP3.4□□□□□ -1.87
RNF4-211ENST00000509206 FAM110DQ8TAY7 271 aaPredicted RBP3.4□□□□□ -1.87
RNF4-211ENST00000509206 SLC35G2Q8TBE7 412 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 NANPQ8TBE9 248 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 ACTL9Q8TC94 416 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 GTF3AQ92664 365 aaKnown RBP3.4□□□□□ -1.87
RNF4-211ENST00000509206 TMEM186Q96B77 213 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 FBXL20Q96IG2 436 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 TSNARE1Q96NA8 513 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 DUX5Q96PT3 197 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 LRRC37BQ96QE4 947 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 INPP5KQ9BT40 448 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 REXO4Q9GZR2 422 aaKnown RBP3.4□□□□□ -1.87
RNF4-211ENST00000509206 RAB1BQ9H0U4 201 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 TSPY26PQ9H489 355 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 FKRPQ9H9S5 495 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 PELI2Q9HAT8 420 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 PARVBQ9HBI1 364 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 SLC52A3Q9NQ40 469 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 H2AFY2Q9P0M6 372 aaPredicted RBP3.4□□□□□ -1.87
RNF4-211ENST00000509206 SLAMF8Q9P0V8 285 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 MARCH4Q9P2E8 410 aaPredicted RBP3.4□□□□□ -1.87
RNF4-211ENST00000509206 GALPQ9UBC7 116 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 RIMKLBQ9ULI2 386 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 MRPS18CQ9Y3D5 142 aaKnown RBP3.4□□□□□ -1.87
RNF4-211ENST00000509206 ZNF337Q9Y3M9 751 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 TCAF1Q9Y4C2 921 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 SPEF1Q9Y4P9 236 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 CLDN16Q9Y5I7 305 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 X6R8D5 127 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 LOC105371242A0A075B767 164 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 hCG_1818297A0A087WSY0 165 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 A0A087X0T9 212 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 GOLGA6L10A0A0M3HER8 536 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 A0A1B0GUS0 222 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 CIB4A0PJX0 185 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 LRIT2A6NDA9 550 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 ERI2A8K979 691 aaKnown RBP3.39□□□□□ -1.87
RNF4-211ENST00000509206 VSTM5A8MXK1 200 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 GOLGA8KD6RF30 607 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 H0YC42 278 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 GOLGA8TH3BQL2 631 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 M0R1B8 84 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 CLGNO14967 610 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 KERAO60938 352 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 SS18L1O75177 396 aaPredicted RBP3.39□□□□□ -1.87
RNF4-211ENST00000509206 REM1O75628 298 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 AQP8O94778 261 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 VAPBO95292 243 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 METTL18O95568 372 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 STAMBPO95630 424 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 PNPP00491 289 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 PRB2P02812 416 aaPredicted RBP3.39□□□□□ -1.87
RNF4-211ENST00000509206 CRYBA1P05813 215 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 ABCB1P08183 1280 aaPredicted RBP3.39□□□□□ -1.87
RNF4-211ENST00000509206 FAM228BP0C875 321 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 DAOP14920 347 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 ANPEPP15144 967 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 NAGAP17050 411 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 GGT1P19440 569 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 COMTP21964 271 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 PRTN3P24158 256 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 CNTFP26441 200 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 ABCD3P28288 659 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 KRT20P35900 424 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 ZNF83P51522 516 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 TPD52P55327 224 aaPredicted RBP3.39□□□□□ -1.87
RNF4-211ENST00000509206 DSCR4P56555 118 aaPredicted RBP3.39□□□□□ -1.87
RNF4-211ENST00000509206 SESN2P58004 480 aaPredicted RBP3.39□□□□□ -1.87
RNF4-211ENST00000509206 SESN3P58005 492 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 REEP5Q00765 189 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 PLCXD2Q0VAA5 305 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 ITGADQ13349 1161 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 PIN1Q13526 163 aaPredicted RBP3.39□□□□□ -1.87
RNF4-211ENST00000509206 ZNF311Q5JNZ3 666 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 PCID2Q5JVF3 399 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 LRRC8EQ6NSJ5 796 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 UGT3A1Q6NUS8 523 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 GALNT18Q6P9A2 607 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 TMIGD1Q6UXZ0 262 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 CYHR1Q6ZMK1 362 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 MBOAT1Q6ZNC8 495 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 Q6ZPA2 131 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 PIWIL4Q7Z3Z4 852 aaKnown RBP3.39□□□□□ -1.87
RNF4-211ENST00000509206 TMPRSS11BQ86T26 416 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 ZBTB46Q86UZ6 589 aa3.39□□□□□ -1.87
RNF4-211ENST00000509206 WDR75Q8IWA0 830 aaKnown RBP3.39□□□□□ -1.87
RNF4-211ENST00000509206 ST13P4Q8IZP2 240 aaPredicted RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms