RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-208ENST00000509165 RSRC1Q96IZ7 334 aaKnown RBP3.46□□□□□ -1.86
NFKB1-208ENST00000509165 MCEEQ96PE7 176 aa3.46□□□□□ -1.86
NFKB1-208ENST00000509165 PSMB7Q99436 277 aa3.46□□□□□ -1.86
NFKB1-208ENST00000509165 NAP1L3Q99457 506 aaPredicted RBP3.46□□□□□ -1.86
NFKB1-208ENST00000509165 VGLL1Q99990 258 aa3.46□□□□□ -1.86
NFKB1-208ENST00000509165 RBM4BQ9BQ04 359 aaKnown RBP3.46□□□□□ -1.86
NFKB1-208ENST00000509165 DDX50Q9BQ39 737 aaKnown RBP3.46□□□□□ -1.86
NFKB1-208ENST00000509165 URM1Q9BTM9 101 aaKnown RBP3.46□□□□□ -1.86
NFKB1-208ENST00000509165 CABLES2Q9BTV7 478 aa3.46□□□□□ -1.86
NFKB1-208ENST00000509165 BBS2Q9BXC9 721 aa3.46□□□□□ -1.86
NFKB1-208ENST00000509165 CLEC7AQ9BXN2 247 aa3.46□□□□□ -1.86
NFKB1-208ENST00000509165 OR2B2Q9GZK3 357 aa3.46□□□□□ -1.86
NFKB1-208ENST00000509165 WNT5BQ9H1J7 359 aa3.46□□□□□ -1.86
NFKB1-208ENST00000509165 ZDHHC4Q9NPG8 344 aa3.46□□□□□ -1.86
NFKB1-208ENST00000509165 PPANQ9NQ55 473 aaKnown RBP3.46□□□□□ -1.86
NFKB1-208ENST00000509165 DDIT4Q9NX09 232 aa3.46□□□□□ -1.86
NFKB1-208ENST00000509165 RCOR3Q9P2K3 495 aaPredicted RBP3.46□□□□□ -1.86
NFKB1-208ENST00000509165 MMP17Q9ULZ9 603 aa3.46□□□□□ -1.86
NFKB1-208ENST00000509165 HS3ST2Q9Y278 367 aa3.46□□□□□ -1.86
NFKB1-208ENST00000509165 TLN2Q9Y4G6 2542 aa3.46□□□□□ -1.86
NFKB1-208ENST00000509165 COL27A1Q8IZC6 1860 aaPredicted RBP3.45□□□□□ -1.86
NFKB1-208ENST00000509165 RP1P56715 2156 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 A0A1W2PNU3 283 aaPredicted RBP3.45□□□□□ -1.86
NFKB1-208ENST00000509165 ILVBLA1L0T0 632 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 TMCO5BA8MYB1 307 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 GOLGA8SH3BPF8 625 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 CCDC188H7C350 402 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 SGK1O00141 431 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 PSTPIP1O43586 416 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 TIMM44O43615 452 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 CLDN11O75508 207 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 APOEP02649 317 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 DNASE1P24855 282 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 PTPN3P26045 913 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 MIPP30301 263 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 CD70P32970 193 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 SULT1E1P49888 294 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 CDH4P55283 916 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 RWDD2BP57060 319 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 ZNF415Q09FC8 603 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 MESDQ14696 234 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 HERC3Q15034 1050 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 CA9Q16790 459 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 TCTE1Q5JU00 501 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 TXNRD3NBQ6F5E7 133 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 Q6ZRP5 223 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 RTN4RL2Q86UN3 420 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 FAM131BQ86XD5 332 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 KATNAL2Q8IYT4 538 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 RCOR2Q8IZ40 523 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 LGI2Q8N0V4 545 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 EID3Q8N140 333 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 UBL4BQ8N7F7 174 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 RTL3Q8N8U3 475 aaKnown RBP3.45□□□□□ -1.86
NFKB1-208ENST00000509165 DCAF4L2Q8NA75 395 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 CCDC26Q8TAB7 109 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 ZNF564Q8TBZ8 553 aaPredicted RBP3.45□□□□□ -1.86
NFKB1-208ENST00000509165 FAM172AQ8WUF8 416 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 KCNE4Q8WWG9 221 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.45□□□□□ -1.86
NFKB1-208ENST00000509165 SPACA9Q96E40 222 aaPredicted RBP3.45□□□□□ -1.86
NFKB1-208ENST00000509165 SPDL1Q96EA4 605 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 TMA16Q96EY4 203 aaKnown RBP3.45□□□□□ -1.86
NFKB1-208ENST00000509165 C18orf12Q96KH6 178 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 FEM1AQ9BSK4 669 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 SNRNP25Q9BV90 132 aaKnown RBP3.45□□□□□ -1.86
NFKB1-208ENST00000509165 CARD6Q9BX69 1037 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 LRRC19Q9H756 370 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 PDFQ9HBH1 243 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.45□□□□□ -1.86
NFKB1-208ENST00000509165 HOMER3Q9NSC5 361 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 ELOVL2Q9NXB9 296 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 P4HTMQ9NXG6 502 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 NSMCE4AQ9NXX6 385 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 DEC1Q9P2X7 70 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 ANAPC7Q9UJX3 599 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 GGA2Q9UJY4 613 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 TMEM5Q9Y2B1 443 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 WDR37Q9Y2I8 494 aa3.45□□□□□ -1.86
NFKB1-208ENST00000509165 UQCRHLA0A096LP55 91 aa3.44□□□□□ -1.86
NFKB1-208ENST00000509165 IGHV1OR15-9A0A0B4J2B8 117 aa3.44□□□□□ -1.86
NFKB1-208ENST00000509165 MEX3AA1L020 520 aaKnown RBP3.44□□□□□ -1.86
NFKB1-208ENST00000509165 TSPAN11A1L157 253 aa3.44□□□□□ -1.86
NFKB1-208ENST00000509165 A8MV72 311 aaPredicted RBP3.44□□□□□ -1.86
NFKB1-208ENST00000509165 WASH3PC4AMC7 463 aa3.44□□□□□ -1.86
NFKB1-208ENST00000509165 NEDD8-MDP1E9PL57 170 aa3.44□□□□□ -1.86
NFKB1-208ENST00000509165 F5H5T6 163 aa3.44□□□□□ -1.86
NFKB1-208ENST00000509165 PGRMC1O00264 195 aaKnown RBP3.44□□□□□ -1.86
NFKB1-208ENST00000509165 ALOX15BO15296 676 aa3.44□□□□□ -1.86
NFKB1-208ENST00000509165 FLRT2O43155 660 aa3.44□□□□□ -1.86
NFKB1-208ENST00000509165 TBL1XO60907 577 aa3.44□□□□□ -1.86
NFKB1-208ENST00000509165 DUS4LO95620 317 aaKnown RBP3.44□□□□□ -1.86
NFKB1-208ENST00000509165 APODP05090 189 aa3.44□□□□□ -1.86
NFKB1-208ENST00000509165 UQCRHP07919 91 aa3.44□□□□□ -1.86
NFKB1-208ENST00000509165 KRT7P08729 469 aa3.44□□□□□ -1.86
NFKB1-208ENST00000509165 SMIM18P0DKX4 95 aa3.44□□□□□ -1.86
NFKB1-208ENST00000509165 H2AFXP16104 143 aaPredicted RBP3.44□□□□□ -1.86
NFKB1-208ENST00000509165 GABRG2P18507 467 aa3.44□□□□□ -1.86
NFKB1-208ENST00000509165 ZNF10P21506 573 aaPredicted RBP3.44□□□□□ -1.86
NFKB1-208ENST00000509165 MPZP25189 248 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms