RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 PGM2Q96G03 612 aa16.95■□□□□ 0.3
UBE3D-207ENST00000509102 TREX2Q9BQ50 279 aaPredicted RBP16.95■□□□□ 0.3
UBE3D-207ENST00000509102 NPDC1Q9NQX5 325 aaPredicted RBP16.95■□□□□ 0.3
UBE3D-207ENST00000509102 ZCCHC3Q9NUD5 404 aaKnown RBP16.95■□□□□ 0.3
UBE3D-207ENST00000509102 NOP53Q9NZM5 478 aaKnown RBP16.95■□□□□ 0.3
UBE3D-207ENST00000509102 NTMQ9P121 344 aa16.95■□□□□ 0.3
UBE3D-207ENST00000509102 GIMAP2Q9UG22 337 aa16.95■□□□□ 0.3
UBE3D-207ENST00000509102 SNX8Q9Y5X2 465 aa16.95■□□□□ 0.3
UBE3D-207ENST00000509102 FADS1O60427 444 aa16.94■□□□□ 0.3
UBE3D-207ENST00000509102 NKX2-2O95096 273 aa16.94■□□□□ 0.3
UBE3D-207ENST00000509102 UTS2O95399 124 aa16.94■□□□□ 0.3
UBE3D-207ENST00000509102 KRT16P08779 473 aa16.94■□□□□ 0.3
UBE3D-207ENST00000509102 ALOX5P09917 674 aa16.94■□□□□ 0.3
UBE3D-207ENST00000509102 HPGDP15428 266 aa16.94■□□□□ 0.3
UBE3D-207ENST00000509102 IGFBP2P18065 325 aa16.94■□□□□ 0.3
UBE3D-207ENST00000509102 CHMP24386 653 aa16.94■□□□□ 0.3
UBE3D-207ENST00000509102 CEACAM8P31997 349 aaPredicted RBP16.94■□□□□ 0.3
UBE3D-207ENST00000509102 ARRB2P32121 409 aa16.94■□□□□ 0.3
UBE3D-207ENST00000509102 DGKQP52824 942 aa16.94■□□□□ 0.3
UBE3D-207ENST00000509102 GAS1P54826 345 aa16.94■□□□□ 0.3
UBE3D-207ENST00000509102 SRYQ05066 204 aa16.94■□□□□ 0.3
UBE3D-207ENST00000509102 C17orf67Q0P5P2 114 aa16.94■□□□□ 0.3
UBE3D-207ENST00000509102 MYBPHQ13203 477 aa16.94■□□□□ 0.3
UBE3D-207ENST00000509102 PTGR1Q14914 329 aa16.94■□□□□ 0.3
UBE3D-207ENST00000509102 SMU1Q2TAY7 513 aa16.94■□□□□ 0.3
UBE3D-207ENST00000509102 SPDYE7PQ495Y7 208 aa16.94■□□□□ 0.3
UBE3D-207ENST00000509102 DCST1Q5T197 706 aa16.94■□□□□ 0.3
UBE3D-207ENST00000509102 RAET1LQ5VY80 246 aa16.94■□□□□ 0.3
UBE3D-207ENST00000509102 CES4AQ5XG92 561 aa16.94■□□□□ 0.3
UBE3D-207ENST00000509102 DMRTC2Q8IXT2 367 aaPredicted RBP16.94■□□□□ 0.3
UBE3D-207ENST00000509102 ZNF295-AS1Q8N0V1 137 aa16.94■□□□□ 0.3
UBE3D-207ENST00000509102 COX18Q8N8Q8 333 aa16.94■□□□□ 0.3
UBE3D-207ENST00000509102 TNIP2Q8NFZ5 429 aa16.94■□□□□ 0.3
UBE3D-207ENST00000509102 OR7A2PQ8NGA2 310 aa16.94■□□□□ 0.3
UBE3D-207ENST00000509102 PIK3R3Q92569 461 aa16.94■□□□□ 0.3
UBE3D-207ENST00000509102 LURAP1Q96LR2 239 aa16.94■□□□□ 0.3
UBE3D-207ENST00000509102 C3orf30Q96M34 536 aa16.94■□□□□ 0.3
UBE3D-207ENST00000509102 TM9SF2Q99805 663 aa16.94■□□□□ 0.3
UBE3D-207ENST00000509102 PAIP2Q9BPZ3 127 aaKnown RBP16.94■□□□□ 0.3
UBE3D-207ENST00000509102 ZNF559Q9BR84 538 aa16.94■□□□□ 0.3
UBE3D-207ENST00000509102 DSN1Q9H410 356 aa16.94■□□□□ 0.3
UBE3D-207ENST00000509102 NEUROD4Q9HD90 331 aa16.94■□□□□ 0.3
UBE3D-207ENST00000509102 KCNN3Q9UGI6 736 aa16.94■□□□□ 0.3
UBE3D-207ENST00000509102 RPH3AQ9Y2J0 694 aaPredicted RBP16.94■□□□□ 0.3
UBE3D-207ENST00000509102 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.94■□□□□ 0.3
UBE3D-207ENST00000509102 RAP2CQ9Y3L5 183 aa16.94■□□□□ 0.3
UBE3D-207ENST00000509102 MBD3L4A6NDZ8 208 aaPredicted RBP16.93■□□□□ 0.3
UBE3D-207ENST00000509102 MBD3L3A6NE82 208 aaPredicted RBP16.93■□□□□ 0.3
UBE3D-207ENST00000509102 MBD3L5A6NJ08 208 aaPredicted RBP16.93■□□□□ 0.3
UBE3D-207ENST00000509102 LINC01387J3KSC0 135 aa16.93■□□□□ 0.3
UBE3D-207ENST00000509102 SOX30O94993 753 aa16.93■□□□□ 0.3
UBE3D-207ENST00000509102 CAPN3P20807 821 aa16.93■□□□□ 0.3
UBE3D-207ENST00000509102 TCEA1P23193 301 aaKnown RBP16.93■□□□□ 0.3
UBE3D-207ENST00000509102 OPRM1P35372 400 aa16.93■□□□□ 0.3
UBE3D-207ENST00000509102 SLC1A6P48664 564 aa16.93■□□□□ 0.3
UBE3D-207ENST00000509102 ASCL1P50553 236 aa16.93■□□□□ 0.3
UBE3D-207ENST00000509102 RPL14P50914 215 aaKnown RBP16.93■□□□□ 0.3
UBE3D-207ENST00000509102 GFRA1P56159 465 aa16.93■□□□□ 0.3
UBE3D-207ENST00000509102 PDCD2Q16342 344 aaPredicted RBP16.93■□□□□ 0.3
UBE3D-207ENST00000509102 HHATQ5VTY9 493 aa16.93■□□□□ 0.3
UBE3D-207ENST00000509102 MFSD12Q6NUT3 480 aa16.93■□□□□ 0.3
UBE3D-207ENST00000509102 BHLHB9Q6PI77 547 aa16.93■□□□□ 0.3
UBE3D-207ENST00000509102 SEM1Q6ZVN7 128 aa16.93■□□□□ 0.3
UBE3D-207ENST00000509102 LIX1LQ8IVB5 337 aa16.93■□□□□ 0.3
UBE3D-207ENST00000509102 OR56A1Q8NGH5 318 aa16.93■□□□□ 0.3
UBE3D-207ENST00000509102 GOT1L1Q8NHS2 421 aaPredicted RBP16.93■□□□□ 0.3
UBE3D-207ENST00000509102 MBD3L2Q8NHZ7 208 aaPredicted RBP16.93■□□□□ 0.3
UBE3D-207ENST00000509102 OR5P2Q8WZ92 322 aa16.93■□□□□ 0.3
UBE3D-207ENST00000509102 ZFP3Q96NJ6 502 aa16.93■□□□□ 0.3
UBE3D-207ENST00000509102 G6PC3Q9BUM1 346 aa16.93■□□□□ 0.3
UBE3D-207ENST00000509102 ACBD3Q9H3P7 528 aa16.93■□□□□ 0.3
UBE3D-207ENST00000509102 MCCC2Q9HCC0 563 aa16.93■□□□□ 0.3
UBE3D-207ENST00000509102 STOML1Q9UBI4 398 aa16.93■□□□□ 0.3
UBE3D-207ENST00000509102 FOXD3Q9UJU5 478 aaPredicted RBP16.93■□□□□ 0.3
UBE3D-207ENST00000509102 FAF1Q9UNN5 650 aaPredicted RBP16.93■□□□□ 0.3
UBE3D-207ENST00000509102 ARHGAP21Q5T5U3 1957 aa16.92■□□□□ 0.3
UBE3D-207ENST00000509102 GXYLT2A0PJZ3 443 aa16.92■□□□□ 0.3
UBE3D-207ENST00000509102 CFLARO15519 480 aa16.92■□□□□ 0.3
UBE3D-207ENST00000509102 LAMP1P11279 417 aa16.92■□□□□ 0.3
UBE3D-207ENST00000509102 PEPDP12955 493 aa16.92■□□□□ 0.3
UBE3D-207ENST00000509102 HK1P19367 917 aa16.92■□□□□ 0.3
UBE3D-207ENST00000509102 EFNA1P20827 205 aaPredicted RBP16.92■□□□□ 0.3
UBE3D-207ENST00000509102 CTSSP25774 331 aa16.92■□□□□ 0.3
UBE3D-207ENST00000509102 LCN1P31025 176 aa16.92■□□□□ 0.3
UBE3D-207ENST00000509102 UQCRC1P31930 480 aa16.92■□□□□ 0.3
UBE3D-207ENST00000509102 EEFSECP57772 596 aaKnown RBP16.92■□□□□ 0.3
UBE3D-207ENST00000509102 EMX2Q04743 252 aa16.92■□□□□ 0.3
UBE3D-207ENST00000509102 STX3Q13277 289 aa16.92■□□□□ 0.3
UBE3D-207ENST00000509102 BCL2A1Q16548 175 aa16.92■□□□□ 0.3
UBE3D-207ENST00000509102 MARCH3Q86UD3 253 aa16.92■□□□□ 0.3
UBE3D-207ENST00000509102 MEIOBQ8N635 442 aa16.92■□□□□ 0.3
UBE3D-207ENST00000509102 ZNF781Q8N8C0 355 aa16.92■□□□□ 0.3
UBE3D-207ENST00000509102 FADS6Q8N9I5 356 aa16.92■□□□□ 0.3
UBE3D-207ENST00000509102 OR2M3Q8NG83 312 aa16.92■□□□□ 0.3
UBE3D-207ENST00000509102 FBXO30Q8TB52 745 aa16.92■□□□□ 0.3
UBE3D-207ENST00000509102 DUSP19Q8WTR2 217 aa16.92■□□□□ 0.3
UBE3D-207ENST00000509102 HOXB13Q92826 284 aaPredicted RBP16.92■□□□□ 0.3
UBE3D-207ENST00000509102 MOAP1Q96BY2 351 aa16.92■□□□□ 0.3
UBE3D-207ENST00000509102 FAM120BQ96EK7 910 aaKnown RBP16.92■□□□□ 0.3
UBE3D-207ENST00000509102 TUBA1CQ9BQE3 449 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms