RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 SCAMP2O15127 329 aaKnown RBP13.43□□□□□ -0.26
UBE2D3-228ENST00000508974 EEF1E1O43324 174 aaKnown RBP13.43□□□□□ -0.26
UBE2D3-228ENST00000508974 ITM2AO43736 263 aa13.43□□□□□ -0.26
UBE2D3-228ENST00000508974 FADS1O60427 444 aa13.43□□□□□ -0.26
UBE2D3-228ENST00000508974 KCNH1O95259 989 aa13.43□□□□□ -0.26
UBE2D3-228ENST00000508974 UTS2O95399 124 aa13.43□□□□□ -0.26
UBE2D3-228ENST00000508974 IL33O95760 270 aa13.43□□□□□ -0.26
UBE2D3-228ENST00000508974 IGKV1D-16P01601 117 aa13.43□□□□□ -0.26
UBE2D3-228ENST00000508974 ACP2P11117 423 aa13.43□□□□□ -0.26
UBE2D3-228ENST00000508974 MAPK1P28482 360 aa13.43□□□□□ -0.26
UBE2D3-228ENST00000508974 CEACAM8P31997 349 aaPredicted RBP13.43□□□□□ -0.26
UBE2D3-228ENST00000508974 TIMP3P35625 211 aa13.43□□□□□ -0.26
UBE2D3-228ENST00000508974 ETV4P43268 484 aa13.43□□□□□ -0.26
UBE2D3-228ENST00000508974 SERPINB4P48594 390 aa13.43□□□□□ -0.26
UBE2D3-228ENST00000508974 GFRA1P56159 465 aa13.43□□□□□ -0.26
UBE2D3-228ENST00000508974 SF3B4Q15427 424 aaKnown RBP eCLIP13.43□□□□□ -0.263e-70■■■■■ 60.5
UBE2D3-228ENST00000508974 CHI3L2Q15782 390 aa13.43□□□□□ -0.26
UBE2D3-228ENST00000508974 PDCD2Q16342 344 aaPredicted RBP13.43□□□□□ -0.26
UBE2D3-228ENST00000508974 GRAMD1BQ3KR37 738 aa13.43□□□□□ -0.26
UBE2D3-228ENST00000508974 CEP85LQ5SZL2 805 aa13.43□□□□□ -0.26
UBE2D3-228ENST00000508974 IL23RQ5VWK5 629 aa13.43□□□□□ -0.26
UBE2D3-228ENST00000508974 RAET1LQ5VY80 246 aa13.43□□□□□ -0.26
UBE2D3-228ENST00000508974 FIGNL1Q6PIW4 674 aa13.43□□□□□ -0.26
UBE2D3-228ENST00000508974 ZZZ3Q8IYH5 903 aa13.43□□□□□ -0.26
UBE2D3-228ENST00000508974 OR2M3Q8NG83 312 aa13.43□□□□□ -0.26
UBE2D3-228ENST00000508974 DUSP19Q8WTR2 217 aa13.43□□□□□ -0.26
UBE2D3-228ENST00000508974 RNF138Q8WVD3 245 aa13.43□□□□□ -0.26
UBE2D3-228ENST00000508974 JADE3Q92613 823 aa13.43□□□□□ -0.26
UBE2D3-228ENST00000508974 TUBGCP3Q96CW5 907 aa13.43□□□□□ -0.26
UBE2D3-228ENST00000508974 C16orf58Q96GQ5 468 aa13.43□□□□□ -0.26
UBE2D3-228ENST00000508974 C3orf14Q9HBI5 128 aa13.43□□□□□ -0.26
UBE2D3-228ENST00000508974 MRTO4Q9UKD2 239 aaKnown RBP13.43□□□□□ -0.26
UBE2D3-228ENST00000508974 SNX8Q9Y5X2 465 aa13.43□□□□□ -0.26
UBE2D3-228ENST00000508974 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 MBD3L4A6NDZ8 208 aaPredicted RBP13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 MBD3L3A6NE82 208 aaPredicted RBP13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 MBD3L5A6NJ08 208 aaPredicted RBP13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 CD8B2A6NJW9 211 aa13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 CLCA1A8K7I4 914 aa13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 ESPNB1AK53 854 aa13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 ZIC3O60481 467 aa13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 TBX19O60806 448 aa13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 LAMP1P11279 417 aa13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 CPN1P15169 458 aa13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 HK1P19367 917 aa13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 SERPINB5P36952 375 aa13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 FRKP42685 505 aaPredicted RBP13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 CLK3P49761 638 aaKnown RBP13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 LHX2P50458 406 aa13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 ASCL1P50553 236 aa13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 PSMD4P55036 377 aaKnown RBP13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 DSCR4P56555 118 aaPredicted RBP13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 C6orf136Q5SQH8 315 aa13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 AAGABQ6PD74 315 aa13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 ARSKQ6UWY0 536 aa13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 R3HCC1LQ7Z5L2 792 aaKnown RBP13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 GCNT2Q8N0V5 402 aa13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 KRTCAP2Q8N6L1 136 aa13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 GATSQ8NAP1 163 aa13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 SLC16A11Q8NCK7 471 aa13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 MBD3L2Q8NHZ7 208 aaPredicted RBP13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 MTERF3Q96E29 417 aa13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 GIMAP5Q96F15 307 aa13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 ZNF764Q96H86 408 aaPredicted RBP13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 ZIM3Q96PE6 472 aa13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 MS4A4EQ96PG1 132 aa13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 TBL1XR1Q9BZK7 514 aa13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 KCNK9Q9NPC2 374 aa13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 ZCCHC3Q9NUD5 404 aaKnown RBP13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 FAM120CQ9NX05 1096 aaKnown RBP13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 ABCG2Q9UNQ0 655 aa13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 L3MBTL1Q9Y468 752 aa13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 MED12LQ86YW9 2145 aa13.42□□□□□ -0.26
UBE2D3-228ENST00000508974 A0A1W2PRB8 838 aa13.41□□□□□ -0.26
UBE2D3-228ENST00000508974 SHISA8B8ZZ34 492 aa13.41□□□□□ -0.26
UBE2D3-228ENST00000508974 SEC14L5O43304 696 aa13.41□□□□□ -0.26
UBE2D3-228ENST00000508974 EMC8O43402 210 aa13.41□□□□□ -0.26
UBE2D3-228ENST00000508974 ZWINTO95229 277 aa13.41□□□□□ -0.26
UBE2D3-228ENST00000508974 ANGPTL1O95841 491 aa13.41□□□□□ -0.26
UBE2D3-228ENST00000508974 TMIGD3P0DMS9 266 aaPredicted RBP13.41□□□□□ -0.26
UBE2D3-228ENST00000508974 RNF144AP50876 292 aaPredicted RBP13.41□□□□□ -0.26
UBE2D3-228ENST00000508974 CLDN18P56856 261 aa13.41□□□□□ -0.26
UBE2D3-228ENST00000508974 FOXF2Q12947 444 aa13.41□□□□□ -0.26
UBE2D3-228ENST00000508974 DUSP5Q16690 384 aa13.41□□□□□ -0.26
UBE2D3-228ENST00000508974 VPS26BQ4G0F5 336 aa13.41□□□□□ -0.26
UBE2D3-228ENST00000508974 CCNJQ5T5M9 372 aa13.41□□□□□ -0.26
UBE2D3-228ENST00000508974 MFSD12Q6NUT3 480 aa13.41□□□□□ -0.26
UBE2D3-228ENST00000508974 POMZP3Q6PJE2 187 aa13.41□□□□□ -0.26
UBE2D3-228ENST00000508974 LRIG3Q6UXM1 1119 aa13.41□□□□□ -0.26
UBE2D3-228ENST00000508974 APOOLQ6UXV4 268 aa13.41□□□□□ -0.26
UBE2D3-228ENST00000508974 ZAR1Q86SH2 424 aa13.41□□□□□ -0.26
UBE2D3-228ENST00000508974 CDH24Q86UP0 819 aa13.41□□□□□ -0.26
UBE2D3-228ENST00000508974 ZNF781Q8N8C0 355 aa13.41□□□□□ -0.26
UBE2D3-228ENST00000508974 FADS6Q8N9I5 356 aa13.41□□□□□ -0.26
UBE2D3-228ENST00000508974 CDRT4Q8N9R6 151 aa13.41□□□□□ -0.26
UBE2D3-228ENST00000508974 OR6Y1Q8NGX8 325 aa13.41□□□□□ -0.26
UBE2D3-228ENST00000508974 CEP70Q8NHQ1 597 aa13.41□□□□□ -0.26
UBE2D3-228ENST00000508974 ZPLD1Q8TCW7 415 aa13.41□□□□□ -0.26
UBE2D3-228ENST00000508974 SMPDL3BQ92485 455 aa13.41□□□□□ -0.26
UBE2D3-228ENST00000508974 INTS12Q96CB8 462 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms