RNA–Protein interactions for RNA: ENST00000508619.1

LINC02171-201, Transcript of long intergenic non-protein coding RNA 2171, humanhuman

TSL 1 (best) BASIC

Gene LINC02171, Length 1,033 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02171-201ENST00000508619 ZIM3Q96PE6 472 aa12.24□□□□□ -0.45
LINC02171-201ENST00000508619 MS4A4EQ96PG1 132 aa12.24□□□□□ -0.45
LINC02171-201ENST00000508619 FAM111AQ96PZ2 611 aa12.24□□□□□ -0.45
LINC02171-201ENST00000508619 TUBA1CQ9BQE3 449 aa12.24□□□□□ -0.45
LINC02171-201ENST00000508619 G6PC3Q9BUM1 346 aa12.24□□□□□ -0.45
LINC02171-201ENST00000508619 PTGES2Q9H7Z7 377 aa12.24□□□□□ -0.45
LINC02171-201ENST00000508619 PPP4R1LQ9P1A2 415 aa12.24□□□□□ -0.45
LINC02171-201ENST00000508619 PTGDR2Q9Y5Y4 395 aa12.24□□□□□ -0.45
LINC02171-201ENST00000508619 C2CD3Q4AC94 2353 aa12.23□□□□□ -0.45
LINC02171-201ENST00000508619 MED12LQ86YW9 2145 aa12.23□□□□□ -0.45
LINC02171-201ENST00000508619 CLCA1A8K7I4 914 aa12.23□□□□□ -0.45
LINC02171-201ENST00000508619 KDM4EB2RXH2 506 aaPredicted RBP12.23□□□□□ -0.45
LINC02171-201ENST00000508619 B4DXG7 233 aa12.23□□□□□ -0.45
LINC02171-201ENST00000508619 H0Y3Z8 333 aa12.23□□□□□ -0.45
LINC02171-201ENST00000508619 NME6O75414 186 aaPredicted RBP12.23□□□□□ -0.45
LINC02171-201ENST00000508619 LYPLA1O75608 230 aaPredicted RBP12.23□□□□□ -0.45
LINC02171-201ENST00000508619 SNUPNO95149 360 aaKnown RBP12.23□□□□□ -0.45
LINC02171-201ENST00000508619 CHRNGP07510 517 aa12.23□□□□□ -0.45
LINC02171-201ENST00000508619 LINC00032P0C843 101 aa12.23□□□□□ -0.45
LINC02171-201ENST00000508619 TMIGD3P0DMS9 266 aaPredicted RBP12.23□□□□□ -0.45
LINC02171-201ENST00000508619 BCKDHAP12694 445 aa12.23□□□□□ -0.45
LINC02171-201ENST00000508619 PEPDP12955 493 aa12.23□□□□□ -0.45
LINC02171-201ENST00000508619 ETV4P43268 484 aa12.23□□□□□ -0.45
LINC02171-201ENST00000508619 EEFSECP57772 596 aaKnown RBP12.23□□□□□ -0.45
LINC02171-201ENST00000508619 B3GALT5-AS1P59052 145 aa12.23□□□□□ -0.45
LINC02171-201ENST00000508619 RPL38P63173 70 aaKnown RBP12.23□□□□□ -0.45
LINC02171-201ENST00000508619 DAZAP2Q15038 168 aaPredicted RBP12.23□□□□□ -0.45
LINC02171-201ENST00000508619 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.23□□□□□ -0.45
LINC02171-201ENST00000508619 EXOSC6Q5RKV6 272 aaKnown RBP12.23□□□□□ -0.45
LINC02171-201ENST00000508619 OR2A2Q6IF42 318 aa12.23□□□□□ -0.45
LINC02171-201ENST00000508619 ZNF551Q7Z340 670 aaPredicted RBP12.23□□□□□ -0.45
LINC02171-201ENST00000508619 OR2M3Q8NG83 312 aa12.23□□□□□ -0.45
LINC02171-201ENST00000508619 PSMA8Q8TAA3 256 aa12.23□□□□□ -0.45
LINC02171-201ENST00000508619 C1GALT1C1Q96EU7 318 aa12.23□□□□□ -0.45
LINC02171-201ENST00000508619 TSSK3Q96PN8 268 aa12.23□□□□□ -0.45
LINC02171-201ENST00000508619 PIGMQ9H3S5 423 aa12.23□□□□□ -0.45
LINC02171-201ENST00000508619 GIN1Q9NXP7 522 aa12.23□□□□□ -0.45
LINC02171-201ENST00000508619 SLC17A7Q9P2U7 560 aa12.23□□□□□ -0.45
LINC02171-201ENST00000508619 ATP6V1HQ9UI12 483 aa12.23□□□□□ -0.45
LINC02171-201ENST00000508619 ITPR3Q14573 2671 aa12.23□□□□□ -0.45
LINC02171-201ENST00000508619 KIAA1549Q9HCM3 1950 aa12.22□□□□□ -0.45
LINC02171-201ENST00000508619 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.22□□□□□ -0.45
LINC02171-201ENST00000508619 ALG1L2C9J202 215 aa12.22□□□□□ -0.45
LINC02171-201ENST00000508619 PIP5K1BO14986 540 aa12.22□□□□□ -0.45
LINC02171-201ENST00000508619 EMC8O43402 210 aa12.22□□□□□ -0.45
LINC02171-201ENST00000508619 TYROBPO43914 113 aa12.22□□□□□ -0.45
LINC02171-201ENST00000508619 UTS2O95399 124 aa12.22□□□□□ -0.45
LINC02171-201ENST00000508619 UQCRC1P31930 480 aa12.22□□□□□ -0.45
LINC02171-201ENST00000508619 GABRA3P34903 492 aa12.22□□□□□ -0.45
LINC02171-201ENST00000508619 GPC1P35052 558 aa12.22□□□□□ -0.45
LINC02171-201ENST00000508619 HPCAL1P37235 193 aa12.22□□□□□ -0.45
LINC02171-201ENST00000508619 DGKQP52824 942 aa12.22□□□□□ -0.45
LINC02171-201ENST00000508619 MANFP55145 182 aaKnown RBP12.22□□□□□ -0.45
LINC02171-201ENST00000508619 WNT3P56703 355 aa12.22□□□□□ -0.45
LINC02171-201ENST00000508619 C21orf58P58505 322 aa12.22□□□□□ -0.45
LINC02171-201ENST00000508619 C17orf67Q0P5P2 114 aa12.22□□□□□ -0.45
LINC02171-201ENST00000508619 HSPB3Q12988 150 aa12.22□□□□□ -0.45
LINC02171-201ENST00000508619 ZNF385BQ569K4 471 aa12.22□□□□□ -0.45
LINC02171-201ENST00000508619 SH2D4BQ5SQS7 431 aa12.22□□□□□ -0.45
LINC02171-201ENST00000508619 TMEM200AQ86VY9 491 aa12.22□□□□□ -0.45
LINC02171-201ENST00000508619 KIRREL3Q8IZU9 778 aa12.22□□□□□ -0.45
LINC02171-201ENST00000508619 NUP43Q8NFH3 380 aa12.22□□□□□ -0.45
LINC02171-201ENST00000508619 FAM110BQ8TC76 370 aa12.22□□□□□ -0.45
LINC02171-201ENST00000508619 GIMAP5Q96F15 307 aa12.22□□□□□ -0.45
LINC02171-201ENST00000508619 PIGQQ9BRB3 760 aa12.22□□□□□ -0.45
LINC02171-201ENST00000508619 MECRQ9BV79 373 aa12.22□□□□□ -0.45
LINC02171-201ENST00000508619 SSU72Q9NP77 194 aaKnown RBP12.22□□□□□ -0.45
LINC02171-201ENST00000508619 RASSF1Q9NS23 344 aa12.22□□□□□ -0.45
LINC02171-201ENST00000508619 CRIM1Q9NZV1 1036 aa12.22□□□□□ -0.45
LINC02171-201ENST00000508619 SH3BP4Q9P0V3 963 aa12.22□□□□□ -0.45
LINC02171-201ENST00000508619 EDARQ9UNE0 448 aa12.22□□□□□ -0.45
LINC02171-201ENST00000508619 MED13LQ71F56 2210 aa12.21□□□□□ -0.45
LINC02171-201ENST00000508619 SCAMP2O15127 329 aaKnown RBP12.21□□□□□ -0.45
LINC02171-201ENST00000508619 SCO2O43819 266 aa12.21□□□□□ -0.45
LINC02171-201ENST00000508619 SLU7O95391 586 aaKnown RBP12.21□□□□□ -0.45
LINC02171-201ENST00000508619 BPGMP07738 259 aa12.21□□□□□ -0.45
LINC02171-201ENST00000508619 CD1EP15812 388 aa12.21□□□□□ -0.45
LINC02171-201ENST00000508619 ZNF17P17021 662 aa12.21□□□□□ -0.45
LINC02171-201ENST00000508619 POU3F2P20265 443 aaPredicted RBP12.21□□□□□ -0.45
LINC02171-201ENST00000508619 PRIM2P49643 509 aa12.21□□□□□ -0.45
LINC02171-201ENST00000508619 TMEM44Q2T9K0 475 aa12.21□□□□□ -0.45
LINC02171-201ENST00000508619 SMU1Q2TAY7 513 aa12.21□□□□□ -0.45
LINC02171-201ENST00000508619 ATP6AP1LQ52LC2 224 aa12.21□□□□□ -0.45
LINC02171-201ENST00000508619 OR5M10Q6IEU7 315 aa12.21□□□□□ -0.45
LINC02171-201ENST00000508619 MFSD12Q6NUT3 480 aa12.21□□□□□ -0.45
LINC02171-201ENST00000508619 MISPQ8IVT2 679 aa12.21□□□□□ -0.45
LINC02171-201ENST00000508619 DDIASQ8IXT1 998 aa12.21□□□□□ -0.45
LINC02171-201ENST00000508619 MEIOBQ8N635 442 aa12.21□□□□□ -0.45
LINC02171-201ENST00000508619 CIDECQ96AQ7 238 aaPredicted RBP12.21□□□□□ -0.45
LINC02171-201ENST00000508619 STACQ99469 402 aa12.21□□□□□ -0.45
LINC02171-201ENST00000508619 TBL1XR1Q9BZK7 514 aa12.21□□□□□ -0.45
LINC02171-201ENST00000508619 DSN1Q9H410 356 aa12.21□□□□□ -0.45
LINC02171-201ENST00000508619 DUSP22Q9NRW4 184 aa12.21□□□□□ -0.45
LINC02171-201ENST00000508619 ATAD3AQ9NVI7 634 aa12.21□□□□□ -0.45
LINC02171-201ENST00000508619 DNAJB12Q9NXW2 375 aaKnown RBP12.21□□□□□ -0.45
LINC02171-201ENST00000508619 ZNF175Q9Y473 711 aa12.21□□□□□ -0.45
LINC02171-201ENST00000508619 AP4B1Q9Y6B7 739 aa12.21□□□□□ -0.45
LINC02171-201ENST00000508619 HRNRQ86YZ3 2850 aaPredicted RBP12.2□□□□□ -0.46
LINC02171-201ENST00000508619 MAP1AP78559 2803 aaPredicted RBP12.2□□□□□ -0.46
LINC02171-201ENST00000508619 A0A087WZY1 265 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms