RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 MED7O43513 233 aa3.89□□□□□ -1.79
GYPA-205ENST00000508337 RANBP6O60518 1105 aaKnown RBP3.89□□□□□ -1.79
GYPA-205ENST00000508337 GOT2P00505 430 aaKnown RBP3.89□□□□□ -1.79
GYPA-205ENST00000508337 FCER2P06734 321 aa3.89□□□□□ -1.79
GYPA-205ENST00000508337 GSTA1P08263 222 aa3.89□□□□□ -1.79
GYPA-205ENST00000508337 SERPINF2P08697 491 aa3.89□□□□□ -1.79
GYPA-205ENST00000508337 DNAH10OSP0CZ25 163 aa3.89□□□□□ -1.79
GYPA-205ENST00000508337 THRBP10828 461 aa3.89□□□□□ -1.79
GYPA-205ENST00000508337 AREGP15514 252 aa3.89□□□□□ -1.79
GYPA-205ENST00000508337 ZNF18P17022 549 aa3.89□□□□□ -1.79
GYPA-205ENST00000508337 NSFP46459 744 aaKnown RBP3.89□□□□□ -1.79
GYPA-205ENST00000508337 MTTPP55157 894 aa3.89□□□□□ -1.79
GYPA-205ENST00000508337 UCP2P55851 309 aa3.89□□□□□ -1.79
GYPA-205ENST00000508337 HERV-K104P63124 156 aa3.89□□□□□ -1.79
GYPA-205ENST00000508337 CLPPQ16740 277 aaPredicted RBP3.89□□□□□ -1.79
GYPA-205ENST00000508337 GPAT3Q53EU6 434 aa3.89□□□□□ -1.79
GYPA-205ENST00000508337 TCHHL1Q5QJ38 904 aaPredicted RBP3.89□□□□□ -1.79
GYPA-205ENST00000508337 LDLRAP1Q5SW96 308 aa3.89□□□□□ -1.79
GYPA-205ENST00000508337 CES3Q6UWW8 571 aa3.89□□□□□ -1.79
GYPA-205ENST00000508337 CWC27Q6UX04 472 aaKnown RBP3.89□□□□□ -1.79
GYPA-205ENST00000508337 WDR88Q6ZMY6 472 aa3.89□□□□□ -1.79
GYPA-205ENST00000508337 MOB2Q70IA6 237 aa3.89□□□□□ -1.79
GYPA-205ENST00000508337 ITIH5Q86UX2 942 aa3.89□□□□□ -1.79
GYPA-205ENST00000508337 ERICH1Q86X53 443 aa3.89□□□□□ -1.79
GYPA-205ENST00000508337 NAXDQ8IW45 347 aa3.89□□□□□ -1.79
GYPA-205ENST00000508337 CCDC65Q8IXS2 484 aa3.89□□□□□ -1.79
GYPA-205ENST00000508337 TTC5Q8N0Z6 440 aa3.89□□□□□ -1.79
GYPA-205ENST00000508337 LINC00469Q8N7U9 141 aa3.89□□□□□ -1.79
GYPA-205ENST00000508337 FAM133AQ8N9E0 248 aa3.89□□□□□ -1.79
GYPA-205ENST00000508337 SIDT2Q8NBJ9 832 aaKnown RBP3.89□□□□□ -1.79
GYPA-205ENST00000508337 RELL2Q8NC24 303 aaPredicted RBP3.89□□□□□ -1.79
GYPA-205ENST00000508337 LILRB4Q8NHJ6 448 aa3.89□□□□□ -1.79
GYPA-205ENST00000508337 FLVCR1-AS1Q8TAF5 88 aa3.89□□□□□ -1.79
GYPA-205ENST00000508337 EXOC6Q8TAG9 804 aa3.89□□□□□ -1.79
GYPA-205ENST00000508337 DTD2Q96FN9 168 aa3.89□□□□□ -1.79
GYPA-205ENST00000508337 PLIN2Q99541 437 aa3.89□□□□□ -1.79
GYPA-205ENST00000508337 GAL3ST1Q99999 423 aa3.89□□□□□ -1.79
GYPA-205ENST00000508337 RIOK1Q9BRS2 568 aaKnown RBP3.89□□□□□ -1.79
GYPA-205ENST00000508337 ZNF416Q9BWM5 594 aa3.89□□□□□ -1.79
GYPA-205ENST00000508337 CAPS2Q9BXY5 557 aa3.89□□□□□ -1.79
GYPA-205ENST00000508337 GPR61Q9BZJ8 451 aa3.89□□□□□ -1.79
GYPA-205ENST00000508337 RMND5AQ9H871 391 aa3.89□□□□□ -1.79
GYPA-205ENST00000508337 DDX28Q9NUL7 540 aaKnown RBP3.89□□□□□ -1.79
GYPA-205ENST00000508337 RCOR3Q9P2K3 495 aaPredicted RBP3.89□□□□□ -1.79
GYPA-205ENST00000508337 STK38LQ9Y2H1 464 aa3.89□□□□□ -1.79
GYPA-205ENST00000508337 KIF16BQ96L93 1317 aa3.89□□□□□ -1.79
GYPA-205ENST00000508337 BRD4O60885 1362 aaPredicted RBP3.89□□□□□ -1.79
GYPA-205ENST00000508337 ZNF318Q5VUA4 2279 aa3.88□□□□□ -1.79
GYPA-205ENST00000508337 MFSD2BA6NFX1 497 aa3.88□□□□□ -1.79
GYPA-205ENST00000508337 GOLGA8SH3BPF8 625 aa3.88□□□□□ -1.79
GYPA-205ENST00000508337 SLC28A1O00337 649 aa3.88□□□□□ -1.79
GYPA-205ENST00000508337 CASC3O15234 703 aaKnown RBP3.88□□□□□ -1.79
GYPA-205ENST00000508337 MAPK13O15264 365 aa3.88□□□□□ -1.79
GYPA-205ENST00000508337 TSPAN2O60636 221 aa3.88□□□□□ -1.79
GYPA-205ENST00000508337 DNAJB6O75190 326 aa3.88□□□□□ -1.79
GYPA-205ENST00000508337 SERPINA3P01011 423 aa3.88□□□□□ -1.79
GYPA-205ENST00000508337 UBTFL6P0CB48 400 aaPredicted RBP3.88□□□□□ -1.79
GYPA-205ENST00000508337 PTBP1P26599 531 aaKnown RBP eCLIP3.88□□□□□ -1.79
GYPA-205ENST00000508337 CCND2P30279 289 aa3.88□□□□□ -1.79
GYPA-205ENST00000508337 CA8P35219 290 aa3.88□□□□□ -1.79
GYPA-205ENST00000508337 EIF3EP60228 445 aaKnown RBP3.88□□□□□ -1.79
GYPA-205ENST00000508337 ACTR3P61158 418 aa3.88□□□□□ -1.79
GYPA-205ENST00000508337 TNFRSF17Q02223 184 aa3.88□□□□□ -1.79
GYPA-205ENST00000508337 SNTB2Q13425 540 aaKnown RBP3.88□□□□□ -1.79
GYPA-205ENST00000508337 CUL1Q13616 776 aa3.88□□□□□ -1.79
GYPA-205ENST00000508337 GSG1Q2KHT4 349 aa3.88□□□□□ -1.79
GYPA-205ENST00000508337 LRIT3Q3SXY7 679 aa3.88□□□□□ -1.79
GYPA-205ENST00000508337 RNF212Q495C1 297 aa3.88□□□□□ -1.79
GYPA-205ENST00000508337 CCDC152Q4G0S7 254 aa3.88□□□□□ -1.79
GYPA-205ENST00000508337 ZNF410Q86VK4 478 aa3.88□□□□□ -1.79
GYPA-205ENST00000508337 OR2T34Q8NGX1 318 aa3.88□□□□□ -1.79
GYPA-205ENST00000508337 OR4F5Q8NH21 305 aa3.88□□□□□ -1.79
GYPA-205ENST00000508337 OR8K3Q8NH51 312 aa3.88□□□□□ -1.79
GYPA-205ENST00000508337 STARD8Q92502 1023 aa3.88□□□□□ -1.79
GYPA-205ENST00000508337 PEX13Q92968 403 aa3.88□□□□□ -1.79
GYPA-205ENST00000508337 EFHD2Q96C19 240 aaPredicted RBP3.88□□□□□ -1.79
GYPA-205ENST00000508337 BIRC7Q96CA5 298 aa3.88□□□□□ -1.79
GYPA-205ENST00000508337 SECISBP2Q96T21 854 aaKnown RBP3.88□□□□□ -1.79
GYPA-205ENST00000508337 ZBTB18Q99592 522 aa3.88□□□□□ -1.79
GYPA-205ENST00000508337 C19orf43Q9BQ61 176 aa3.88□□□□□ -1.79
GYPA-205ENST00000508337 GON7Q9BXV9 100 aa3.88□□□□□ -1.79
GYPA-205ENST00000508337 TSPYL1Q9H0U9 437 aa3.88□□□□□ -1.79
GYPA-205ENST00000508337 DCTPP1Q9H773 170 aa3.88□□□□□ -1.79
GYPA-205ENST00000508337 RAB20Q9NX57 234 aa3.88□□□□□ -1.79
GYPA-205ENST00000508337 ATG4BQ9Y4P1 393 aa3.88□□□□□ -1.79
GYPA-205ENST00000508337 A0A087WZY1 265 aa3.87□□□□□ -1.79
GYPA-205ENST00000508337 A0A1B0GWJ7 208 aa3.87□□□□□ -1.79
GYPA-205ENST00000508337 GOLGA8OA6NCC3 632 aa3.87□□□□□ -1.79
GYPA-205ENST00000508337 GOLGA8NF8WBI6 632 aa3.87□□□□□ -1.79
GYPA-205ENST00000508337 F8WDY8 70 aa3.87□□□□□ -1.79
GYPA-205ENST00000508337 CHEK1O14757 476 aa3.87□□□□□ -1.79
GYPA-205ENST00000508337 SH2D1BO14796 132 aa3.87□□□□□ -1.79
GYPA-205ENST00000508337 CACNG3O60359 315 aa3.87□□□□□ -1.79
GYPA-205ENST00000508337 KRT14P02533 472 aa3.87□□□□□ -1.79
GYPA-205ENST00000508337 UQCRFS1P1P0C7P4 283 aa3.87□□□□□ -1.79
GYPA-205ENST00000508337 STAG3L3P0CL85 134 aa3.87□□□□□ -1.79
GYPA-205ENST00000508337 RALAP11233 206 aa3.87□□□□□ -1.79
GYPA-205ENST00000508337 ZNF3P17036 446 aa3.87□□□□□ -1.79
GYPA-205ENST00000508337 UGT1A6P19224 532 aa3.87□□□□□ -1.79
GYPA-205ENST00000508337 CYP3A5P20815 502 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms