RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 DACH2Q96NX9 599 aa11.75□□□□□ -0.53
HMGCS1-205ENST00000508319 PIGMQ9H3S5 423 aa11.75□□□□□ -0.53
HMGCS1-205ENST00000508319 PLEKHF2Q9H8W4 249 aa11.75□□□□□ -0.53
HMGCS1-205ENST00000508319 C1orf109Q9NX04 203 aa11.75□□□□□ -0.53
HMGCS1-205ENST00000508319 MED11Q9P086 117 aa11.75□□□□□ -0.53
HMGCS1-205ENST00000508319 PACSIN3Q9UKS6 424 aa11.75□□□□□ -0.53
HMGCS1-205ENST00000508319 A0A1W2PPR1 153 aa11.74□□□□□ -0.53
HMGCS1-205ENST00000508319 SLC22A20A6NK97 555 aa11.74□□□□□ -0.53
HMGCS1-205ENST00000508319 A8MXE2 369 aa11.74□□□□□ -0.53
HMGCS1-205ENST00000508319 H0YC42 278 aa11.74□□□□□ -0.53
HMGCS1-205ENST00000508319 AZIN1O14977 448 aa11.74□□□□□ -0.53
HMGCS1-205ENST00000508319 SEC22BO75396 215 aa11.74□□□□□ -0.53
HMGCS1-205ENST00000508319 ATE1O95260 518 aa11.74□□□□□ -0.53
HMGCS1-205ENST00000508319 IGKV1D-16P01601 117 aa11.74□□□□□ -0.53
HMGCS1-205ENST00000508319 HRGP04196 525 aa11.74□□□□□ -0.53
HMGCS1-205ENST00000508319 PEPDP12955 493 aa11.74□□□□□ -0.53
HMGCS1-205ENST00000508319 SDC1P18827 310 aa11.74□□□□□ -0.53
HMGCS1-205ENST00000508319 KRT4P19013 534 aa11.74□□□□□ -0.53
HMGCS1-205ENST00000508319 HK1P19367 917 aa11.74□□□□□ -0.53
HMGCS1-205ENST00000508319 CPOXP36551 454 aa11.74□□□□□ -0.53
HMGCS1-205ENST00000508319 MAP3K8P41279 467 aa11.74□□□□□ -0.53
HMGCS1-205ENST00000508319 RFX3P48380 749 aa11.74□□□□□ -0.53
HMGCS1-205ENST00000508319 TPD52P55327 224 aaPredicted RBP11.74□□□□□ -0.53
HMGCS1-205ENST00000508319 SLC18A2Q05940 514 aa11.74□□□□□ -0.53
HMGCS1-205ENST00000508319 HSPB3Q12988 150 aa11.74□□□□□ -0.53
HMGCS1-205ENST00000508319 ZNF385BQ569K4 471 aa11.74□□□□□ -0.53
HMGCS1-205ENST00000508319 KANK2Q63ZY3 851 aa11.74□□□□□ -0.53
HMGCS1-205ENST00000508319 ANKRD26P1Q6NSI1 321 aa11.74□□□□□ -0.53
HMGCS1-205ENST00000508319 Q6ZSR9 355 aa11.74□□□□□ -0.53
HMGCS1-205ENST00000508319 C10orf107Q8IVU9 208 aa11.74□□□□□ -0.53
HMGCS1-205ENST00000508319 CIDECQ96AQ7 238 aaPredicted RBP11.74□□□□□ -0.53
HMGCS1-205ENST00000508319 C1GALT1C1Q96EU7 318 aa11.74□□□□□ -0.53
HMGCS1-205ENST00000508319 CCT7Q99832 543 aa11.74□□□□□ -0.53
HMGCS1-205ENST00000508319 TUBB1Q9H4B7 451 aa11.74□□□□□ -0.53
HMGCS1-205ENST00000508319 LRTM1Q9HBL6 345 aa11.74□□□□□ -0.53
HMGCS1-205ENST00000508319 EQTNQ9NQ60 294 aa11.74□□□□□ -0.53
HMGCS1-205ENST00000508319 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 IGLV3-32A0A0A0MS00 114 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 GXYLT2A0PJZ3 443 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 OR2M5A3KFT3 312 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 SH3D21A4FU49 640 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 SLC28A1O00337 649 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 PDPK1O15530 556 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 TBX19O60806 448 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 RAF1P04049 648 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 CRHP06850 196 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 NEFHP12036 1026 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 CD99P14209 185 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 KLK2P20151 261 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 CCKARP32238 428 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 FRKP42685 505 aaPredicted RBP11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 SUCLG1P53597 346 aaKnown RBP11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 PSMD4P55036 377 aaKnown RBP11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 DIO3P55073 304 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 PRR5P85299 388 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 PDE7AQ13946 482 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 GRAMD1BQ3KR37 738 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 FBXW10Q5XX13 1052 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 OR2A2Q6IF42 318 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 VWA1Q6PCB0 445 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 APOOLQ6UXV4 268 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 P4HA3Q7Z4N8 544 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 MARCH3Q86UD3 253 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 MEIOBQ8N635 442 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 OR5M1Q8NGP8 315 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 FIG4Q92562 907 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 PIK3R3Q92569 461 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 STARD4Q96DR4 205 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 GIMAP5Q96F15 307 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 NSD1Q96L73 2696 aaPredicted RBP11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 TSSK3Q96PN8 268 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 YIPF4Q9BSR8 244 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 GATA5Q9BWX5 397 aaPredicted RBP11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 PTGES2Q9H7Z7 377 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 SDHAF3Q9NRP4 125 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 MKS1Q9NXB0 559 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 MID2Q9UJV3 735 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 MRTO4Q9UKD2 239 aaKnown RBP11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 EDARQ9UNE0 448 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 FIS1Q9Y3D6 152 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 ZNF337Q9Y3M9 751 aa11.73□□□□□ -0.53
HMGCS1-205ENST00000508319 TTC36A6NLP5 189 aa11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 TMEM233B4DJY2 109 aa11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 H3BML4 177 aa11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 LINC01387J3KSC0 135 aa11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 MSTNO14793 375 aa11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 LSM1O15116 133 aaKnown RBP11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 SEC14L5O43304 696 aa11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 RGS14O43566 566 aa11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 NKX2-2O95096 273 aa11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 UTS2O95399 124 aa11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 ANGPTL1O95841 491 aa11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 CHRNGP07510 517 aa11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 GABRA3P34903 492 aa11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 PCYT1AP49585 367 aa11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 CLDN20P56880 219 aa11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 RPL38P63173 70 aaKnown RBP11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 EEF1A1P68104 462 aaKnown RBP11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 FOXD4Q12950 439 aaPredicted RBP11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 POU4F3Q15319 338 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms