RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 CFPP27918 469 aa12.4□□□□□ -0.42
DDR1-260ENST00000507533 SLC6A8P48029 635 aa12.4□□□□□ -0.42
DDR1-260ENST00000507533 ATP6V0D1P61421 351 aa12.4□□□□□ -0.42
DDR1-260ENST00000507533 PHEXP78562 749 aa12.4□□□□□ -0.42
DDR1-260ENST00000507533 CUL3Q13618 768 aa12.4□□□□□ -0.42
DDR1-260ENST00000507533 EFR3AQ14156 821 aa12.4□□□□□ -0.42
DDR1-260ENST00000507533 FAM120AOSQ5T036 256 aa12.4□□□□□ -0.42
DDR1-260ENST00000507533 LGSNQ5TDP6 509 aa12.4□□□□□ -0.42
DDR1-260ENST00000507533 EMBQ6PCB8 327 aa12.4□□□□□ -0.42
DDR1-260ENST00000507533 BHLHB9Q6PI77 547 aa12.4□□□□□ -0.42
DDR1-260ENST00000507533 C12orf54Q6X4T0 127 aa12.4□□□□□ -0.42
DDR1-260ENST00000507533 STK32CQ86UX6 486 aa12.4□□□□□ -0.42
DDR1-260ENST00000507533 NUDT13Q86X67 352 aa12.4□□□□□ -0.42
DDR1-260ENST00000507533 OR52R1Q8NGF1 315 aa12.4□□□□□ -0.42
DDR1-260ENST00000507533 AENQ8WTP8 325 aaKnown RBP12.4□□□□□ -0.42
DDR1-260ENST00000507533 UBXN10Q96LJ8 280 aa12.4□□□□□ -0.42
DDR1-260ENST00000507533 ADAD1Q96M93 576 aaKnown RBP12.4□□□□□ -0.42
DDR1-260ENST00000507533 TRIM2Q9C040 744 aa12.4□□□□□ -0.42
DDR1-260ENST00000507533 GRIP2Q9C0E4 1043 aa12.4□□□□□ -0.42
DDR1-260ENST00000507533 FOLH1BQ9HBA9 442 aa12.4□□□□□ -0.42
DDR1-260ENST00000507533 CISD1Q9NZ45 108 aaKnown RBP12.4□□□□□ -0.42
DDR1-260ENST00000507533 MAT2BQ9NZL9 334 aa12.4□□□□□ -0.42
DDR1-260ENST00000507533 PPP4R1LQ9P1A2 415 aa12.4□□□□□ -0.42
DDR1-260ENST00000507533 OPTCQ9UBM4 332 aa12.4□□□□□ -0.42
DDR1-260ENST00000507533 PRODH2Q9UF12 536 aa12.4□□□□□ -0.42
DDR1-260ENST00000507533 RAB21Q9UL25 225 aa12.4□□□□□ -0.42
DDR1-260ENST00000507533 GPR55Q9Y2T6 319 aaPredicted RBP12.4□□□□□ -0.42
DDR1-260ENST00000507533 ACOT9Q9Y305 439 aa12.4□□□□□ -0.42
DDR1-260ENST00000507533 PCDHGA11Q9Y5H2 935 aa12.4□□□□□ -0.42
DDR1-260ENST00000507533 SNX8Q9Y5X2 465 aa12.4□□□□□ -0.42
DDR1-260ENST00000507533 OR2M5A3KFT3 312 aa12.39□□□□□ -0.43
DDR1-260ENST00000507533 K7EPI3 171 aa12.39□□□□□ -0.43
DDR1-260ENST00000507533 TSPAN2O60636 221 aa12.39□□□□□ -0.43
DDR1-260ENST00000507533 CBX7O95931 251 aa12.39□□□□□ -0.43
DDR1-260ENST00000507533 C2P06681 752 aa12.39□□□□□ -0.43
DDR1-260ENST00000507533 SNRPAP09012 282 aaKnown RBP12.39□□□□□ -0.43
DDR1-260ENST00000507533 PYGBP11216 843 aa12.39□□□□□ -0.43
DDR1-260ENST00000507533 PTNP21246 168 aa12.39□□□□□ -0.43
DDR1-260ENST00000507533 GCAP28676 217 aa12.39□□□□□ -0.43
DDR1-260ENST00000507533 TYK2P29597 1187 aa12.39□□□□□ -0.43
DDR1-260ENST00000507533 KRT20P35900 424 aa12.39□□□□□ -0.43
DDR1-260ENST00000507533 EMDP50402 254 aa12.39□□□□□ -0.43
DDR1-260ENST00000507533 SERPINB8P50452 374 aa12.39□□□□□ -0.43
DDR1-260ENST00000507533 LARP4Q71RC2 724 aaKnown RBP eCLIP12.39□□□□□ -0.43
DDR1-260ENST00000507533 TBC1D1Q86TI0 1168 aaPredicted RBP12.39□□□□□ -0.43
DDR1-260ENST00000507533 ATG4DQ86TL0 474 aaPredicted RBP12.39□□□□□ -0.43
DDR1-260ENST00000507533 DTX2Q86UW9 622 aa12.39□□□□□ -0.43
DDR1-260ENST00000507533 ZNF619Q8N2I2 560 aa12.39□□□□□ -0.43
DDR1-260ENST00000507533 FADS6Q8N9I5 356 aa12.39□□□□□ -0.43
DDR1-260ENST00000507533 OR2M3Q8NG83 312 aa12.39□□□□□ -0.43
DDR1-260ENST00000507533 RNF138Q8WVD3 245 aa12.39□□□□□ -0.43
DDR1-260ENST00000507533 HDHD5Q9BXW7 423 aa12.39□□□□□ -0.43
DDR1-260ENST00000507533 ADAM19Q9H013 955 aa12.39□□□□□ -0.43
DDR1-260ENST00000507533 MANSC1Q9H8J5 431 aa12.39□□□□□ -0.43
DDR1-260ENST00000507533 CHODLQ9H9P2 273 aa12.39□□□□□ -0.43
DDR1-260ENST00000507533 FAIMQ9NVQ4 179 aa12.39□□□□□ -0.43
DDR1-260ENST00000507533 MED11Q9P086 117 aa12.39□□□□□ -0.43
DDR1-260ENST00000507533 KCNS2Q9ULS6 477 aa12.39□□□□□ -0.43
DDR1-260ENST00000507533 TSC22D4Q9Y3Q8 395 aa12.39□□□□□ -0.43
DDR1-260ENST00000507533 A0A096LPK6 155 aa12.38□□□□□ -0.43
DDR1-260ENST00000507533 TRIM49D1C9J1S8 452 aa12.38□□□□□ -0.43
DDR1-260ENST00000507533 ATP1B1P05026 303 aa12.38□□□□□ -0.43
DDR1-260ENST00000507533 LTA4HP09960 611 aaKnown RBP12.38□□□□□ -0.43
DDR1-260ENST00000507533 HNF1AP20823 631 aa12.38□□□□□ -0.43
DDR1-260ENST00000507533 ADH6P28332 368 aa12.38□□□□□ -0.43
DDR1-260ENST00000507533 IL12BP29460 328 aa12.38□□□□□ -0.43
DDR1-260ENST00000507533 HSD17B3P37058 310 aa12.38□□□□□ -0.43
DDR1-260ENST00000507533 FEN1P39748 380 aaKnown RBP12.38□□□□□ -0.43
DDR1-260ENST00000507533 MAGEA12P43365 314 aa12.38□□□□□ -0.43
DDR1-260ENST00000507533 EIF1AXP47813 144 aaKnown RBP12.38□□□□□ -0.43
DDR1-260ENST00000507533 IRX1P78414 480 aaPredicted RBP12.38□□□□□ -0.43
DDR1-260ENST00000507533 BSPH1Q075Z2 132 aa12.38□□□□□ -0.43
DDR1-260ENST00000507533 DLG1Q12959 904 aa12.38□□□□□ -0.43
DDR1-260ENST00000507533 SQLEQ14534 574 aa12.38□□□□□ -0.43
DDR1-260ENST00000507533 TSC22D1Q15714 1073 aa12.38□□□□□ -0.43
DDR1-260ENST00000507533 TAB1Q15750 504 aa12.38□□□□□ -0.43
DDR1-260ENST00000507533 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.38□□□□□ -0.43
DDR1-260ENST00000507533 TRMT12Q53H54 448 aaKnown RBP12.38□□□□□ -0.43
DDR1-260ENST00000507533 MEX3DQ86XN8 651 aaKnown RBP12.38□□□□□ -0.43
DDR1-260ENST00000507533 CNPY4Q8N129 248 aa12.38□□□□□ -0.43
DDR1-260ENST00000507533 HSD17B8Q92506 261 aa12.38□□□□□ -0.43
DDR1-260ENST00000507533 C12orf49Q9H741 205 aa12.38□□□□□ -0.43
DDR1-260ENST00000507533 NMRAL1Q9HBL8 299 aa12.38□□□□□ -0.43
DDR1-260ENST00000507533 AP4B1Q9Y6B7 739 aa12.38□□□□□ -0.43
DDR1-260ENST00000507533 SLC35F4A4IF30 521 aa12.37□□□□□ -0.43
DDR1-260ENST00000507533 DPRXA6NFQ7 191 aa12.37□□□□□ -0.43
DDR1-260ENST00000507533 GOLGA6L10A6NI86 522 aa12.37□□□□□ -0.43
DDR1-260ENST00000507533 EIF1AYO14602 144 aaKnown RBP12.37□□□□□ -0.43
DDR1-260ENST00000507533 SCO2O43819 266 aa12.37□□□□□ -0.43
DDR1-260ENST00000507533 RAMP1O60894 148 aa12.37□□□□□ -0.43
DDR1-260ENST00000507533 ERAL1O75616 437 aaKnown RBP12.37□□□□□ -0.43
DDR1-260ENST00000507533 SHBGP04278 402 aa12.37□□□□□ -0.43
DDR1-260ENST00000507533 PCSK2P16519 638 aa12.37□□□□□ -0.43
DDR1-260ENST00000507533 IL32P24001 234 aa12.37□□□□□ -0.43
DDR1-260ENST00000507533 GZMKP49863 264 aa12.37□□□□□ -0.43
DDR1-260ENST00000507533 PNLIPRP2P54317 469 aa12.37□□□□□ -0.43
DDR1-260ENST00000507533 C21orf58P58505 322 aa12.37□□□□□ -0.43
DDR1-260ENST00000507533 LSM11P83369 360 aaKnown RBP eCLIP12.37□□□□□ -0.43
DDR1-260ENST00000507533 GANABQ14697 944 aaKnown RBP12.37□□□□□ -0.43
DDR1-260ENST00000507533 AGAP6Q5VW22 663 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms