RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 WDR41Q9HAD4 459 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 TAS2R13Q9NYV9 303 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 PHF11Q9UIL8 331 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 FBXO5Q9UKT4 447 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 CORO1CQ9ULV4 474 aaPredicted RBP6.32□□□□□ -1.4
VCAN-207ENST00000507162 MOKQ9UQ07 419 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 CFL2Q9Y281 166 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 GOLGA8QA0A0J9YX86 632 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 A0A1W2PR48 441 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 CIB4A0PJX0 185 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 GOLGA8OA6NCC3 632 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 OR6C70A6NIJ9 312 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 C9JVG2 144 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 GOLGA8NF8WBI6 632 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 LYNX1G3V0Z9 82 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 GOLGA8RI6L899 631 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 PGRMC2O15173 223 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 PNPP00491 289 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 KNG1P01042 644 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 GYPCP04921 128 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 LYNX1P0DP58 116 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 S1PR1P21453 382 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 DRD5P21918 477 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 IL12BP29460 328 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 SLC1A2P43004 574 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 XKP51811 444 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 RAP1GDS1P52306 607 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 GAS1P54826 345 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 CDKN2DP55273 166 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 CARD18P57730 90 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 RASGEF1BQ0VAM2 473 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 TCEAL1Q15170 157 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 FAM189A2Q15884 450 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 TMEM35AQ53FP2 167 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 PDSS1Q5T2R2 415 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 HBMQ6B0K9 141 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 BRICD5Q6PL45 260 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 LARP4Q71RC2 724 aaKnown RBP eCLIP6.31□□□□□ -1.4
VCAN-207ENST00000507162 SPATA19Q7Z5L4 167 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 TBC1D1Q86TI0 1168 aaPredicted RBP6.31□□□□□ -1.4
VCAN-207ENST00000507162 LUZP1Q86V48 1076 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 P2RY8Q86VZ1 359 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 WDR75Q8IWA0 830 aaKnown RBP6.31□□□□□ -1.4
VCAN-207ENST00000507162 CCDC89Q8N998 374 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 OR51F2Q8NH61 342 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 SLC35B2Q8TB61 432 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.31□□□□□ -1.4
VCAN-207ENST00000507162 NANPQ8TBE9 248 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 DUSP19Q8WTR2 217 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 ABHD3Q8WU67 409 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 CHP1Q99653 195 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 RBM4BQ9BQ04 359 aaKnown RBP6.31□□□□□ -1.4
VCAN-207ENST00000507162 TSGA10Q9BZW7 698 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 PITHD1Q9GZP4 211 aaPredicted RBP6.31□□□□□ -1.4
VCAN-207ENST00000507162 NHEJ1Q9H9Q4 299 aaPredicted RBP6.31□□□□□ -1.4
VCAN-207ENST00000507162 ACSS1Q9NUB1 689 aaPredicted RBP6.31□□□□□ -1.4
VCAN-207ENST00000507162 PAQR5Q9NXK6 330 aaPredicted RBP6.31□□□□□ -1.4
VCAN-207ENST00000507162 TREM2Q9NZC2 230 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 PRSS50Q9UI38 385 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 MCM8Q9UJA3 840 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 PCDHB14Q9Y5E9 798 aa6.31□□□□□ -1.4
VCAN-207ENST00000507162 EXPH5Q8NEV8 1989 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 A0A0J9YW62 118 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 TCRBV7S2A1N4TA0A589 114 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 OR5H1A6NKK0 313 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 SMTNL1A8MU46 457 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 G3V4G9 280 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 GOLGA8MH3BSY2 632 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 AP3B1O00203 1094 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 TIMM23O14925 209 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 SHOX2O60902 331 aaPredicted RBP6.3□□□□□ -1.4
VCAN-207ENST00000507162 KERAO60938 352 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 RAD51DO75771 328 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 YES1P07947 543 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 ENO2P09104 434 aaPredicted RBP6.3□□□□□ -1.4
VCAN-207ENST00000507162 PABPC4LP0CB38 370 aaKnown RBP6.3□□□□□ -1.4
VCAN-207ENST00000507162 NR2F6P10588 404 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 CD22P20273 847 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 IGHV1-2P23083 117 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 CTNNA1P35221 906 aaKnown RBP6.3□□□□□ -1.4
VCAN-207ENST00000507162 SERPINF1P36955 418 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 PPICP45877 212 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 NAP1L1P55209 391 aaKnown RBP6.3□□□□□ -1.4
VCAN-207ENST00000507162 LOXL3P58215 753 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 BASP1P80723 227 aaKnown RBP6.3□□□□□ -1.4
VCAN-207ENST00000507162 BAMBIQ13145 260 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 SNX1Q13596 522 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 EFR3AQ14156 821 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 GANABQ14697 944 aaKnown RBP6.3□□□□□ -1.4
VCAN-207ENST00000507162 GLYR1Q49A26 553 aaPredicted RBP6.3□□□□□ -1.4
VCAN-207ENST00000507162 SWT1Q5T5J6 900 aaKnown RBP6.3□□□□□ -1.4
VCAN-207ENST00000507162 CYP20A1Q6UW02 462 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 CCBE1Q6UXH8 406 aaPredicted RBP6.3□□□□□ -1.4
VCAN-207ENST00000507162 Q6ZT83 130 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 SSX8Q7RTT4 187 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 C1QL2Q7Z5L3 287 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 ZCCHC24Q8N2G6 241 aaKnown RBP6.3□□□□□ -1.4
VCAN-207ENST00000507162 KIR3DL3Q8N743 410 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 FADS6Q8N9I5 356 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 OR4K14Q8NGD5 310 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms